EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000015902 (Gene tree)
Gene ID: 101838151
Gene Symbol: Smarca5
Alias: 4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 30303 bases
Position: chrKB708202.1:3022589-3052891
Accession: 101838151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000016929	ResIII	PF04851.15	6.7e-11	1	1
ENSMAUP00000016929	DEAD	PF00270.29	3.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000020874	-	3054	XM_013118874	ENSMAUP00000016929	1017 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000015902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000015902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000015902	Smarca5	50	48.800	ENSMAUG00000021941	Hells	66	48.800
ENSMAUG00000015902	Smarca5	94	85.224	ENSMAUG00000008133	Smarca1	91	85.338

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000015902	Smarca5	98	99.396	ENSG00000153147	SMARCA5	94	99.396	Homo_sapiens
ENSMAUG00000015902	Smarca5	98	99.698	ENSAMEG00000009585	SMARCA5	94	99.698	Ailuropoda_melanoleuca
ENSMAUG00000015902	Smarca5	95	96.715	ENSAPLG00000009206	SMARCA5	100	96.715	Anas_platyrhynchos
ENSMAUG00000015902	Smarca5	98	96.579	ENSACAG00000003038	SMARCA5	96	96.579	Anolis_carolinensis
ENSMAUG00000015902	Smarca5	98	99.396	ENSANAG00000019345	SMARCA5	100	99.097	Aotus_nancymaae
ENSMAUG00000015902	Smarca5	98	99.597	ENSBTAG00000003399	SMARCA5	94	99.597	Bos_taurus
ENSMAUG00000015902	Smarca5	98	99.496	ENSCJAG00000002735	SMARCA5	94	99.496	Callithrix_jacchus
ENSMAUG00000015902	Smarca5	98	99.698	ENSCAFG00000007525	SMARCA5	94	99.698	Canis_familiaris
ENSMAUG00000015902	Smarca5	96	99.589	ENSCAFG00020025641	SMARCA5	93	99.589	Canis_lupus_dingo
ENSMAUG00000015902	Smarca5	98	97.784	ENSCHIG00000016375	-	95	97.859	Capra_hircus
ENSMAUG00000015902	Smarca5	98	99.597	ENSCHIG00000013730	-	94	99.597	Capra_hircus
ENSMAUG00000015902	Smarca5	98	99.496	ENSTSYG00000009954	SMARCA5	99	99.496	Carlito_syrichta
ENSMAUG00000015902	Smarca5	95	99.483	ENSCAPG00000013747	SMARCA5	95	99.483	Cavia_aperea
ENSMAUG00000015902	Smarca5	98	99.799	ENSCPOG00000002259	SMARCA5	94	99.799	Cavia_porcellus
ENSMAUG00000015902	Smarca5	98	99.496	ENSCCAG00000027215	SMARCA5	100	99.198	Cebus_capucinus
ENSMAUG00000015902	Smarca5	98	99.496	ENSCATG00000044917	SMARCA5	94	99.496	Cercocebus_atys
ENSMAUG00000015902	Smarca5	98	99.799	ENSCLAG00000006153	SMARCA5	100	99.799	Chinchilla_lanigera
ENSMAUG00000015902	Smarca5	95	99.484	ENSCSAG00000003448	SMARCA5	100	99.484	Chlorocebus_sabaeus
ENSMAUG00000015902	Smarca5	89	100.000	ENSCHOG00000011724	SMARCA5	86	100.000	Choloepus_hoffmanni
ENSMAUG00000015902	Smarca5	98	98.290	ENSCPBG00000027535	SMARCA5	96	98.290	Chrysemys_picta_bellii
ENSMAUG00000015902	Smarca5	98	99.496	ENSCANG00000041629	SMARCA5	94	99.496	Colobus_angolensis_palliatus
ENSMAUG00000015902	Smarca5	98	100.000	ENSCGRG00001012719	Smarca5	94	100.000	Cricetulus_griseus_chok1gshd
ENSMAUG00000015902	Smarca5	99	99.204	ENSCGRG00000001417	Smarca5	99	99.204	Cricetulus_griseus_crigri
ENSMAUG00000015902	Smarca5	98	96.777	ENSDNOG00000009158	SMARCA5	94	96.777	Dasypus_novemcinctus
ENSMAUG00000015902	Smarca5	93	90.928	ENSDORG00000003466	Smarca5	97	90.928	Dipodomys_ordii
ENSMAUG00000015902	Smarca5	95	85.640	ENSEBUG00000014773	SMARCA5	96	85.640	Eptatretus_burgeri
ENSMAUG00000015902	Smarca5	99	97.645	ENSEASG00005001866	SMARCA5	98	99.636	Equus_asinus_asinus
ENSMAUG00000015902	Smarca5	99	97.645	ENSECAG00000002676	SMARCA5	97	97.645	Equus_caballus
ENSMAUG00000015902	Smarca5	98	95.166	ENSEEUG00000013176	SMARCA5	100	95.166	Erinaceus_europaeus
ENSMAUG00000015902	Smarca5	95	89.278	ENSELUG00000014653	SMARCA5	99	89.278	Esox_lucius
ENSMAUG00000015902	Smarca5	98	99.698	ENSFCAG00000004544	SMARCA5	94	99.698	Felis_catus
ENSMAUG00000015902	Smarca5	95	97.320	ENSFALG00000004987	SMARCA5	100	97.320	Ficedula_albicollis
ENSMAUG00000015902	Smarca5	98	99.799	ENSFDAG00000021016	SMARCA5	100	99.799	Fukomys_damarensis
ENSMAUG00000015902	Smarca5	96	89.355	ENSGMOG00000007519	SMARCA5	94	89.355	Gadus_morhua
ENSMAUG00000015902	Smarca5	98	97.586	ENSGALG00000009913	SMARCA5	96	97.586	Gallus_gallus
ENSMAUG00000015902	Smarca5	96	90.686	ENSGACG00000017238	SMARCA5	98	88.340	Gasterosteus_aculeatus
ENSMAUG00000015902	Smarca5	98	98.390	ENSGAGG00000019882	SMARCA5	96	98.390	Gopherus_agassizii
ENSMAUG00000015902	Smarca5	98	99.396	ENSGGOG00000012595	SMARCA5	99	99.396	Gorilla_gorilla
ENSMAUG00000015902	Smarca5	98	90.030	ENSHGLG00000000317	-	95	90.030	Heterocephalus_glaber_female
ENSMAUG00000015902	Smarca5	98	99.698	ENSHGLG00000000816	-	94	99.698	Heterocephalus_glaber_female
ENSMAUG00000015902	Smarca5	98	99.698	ENSHGLG00100018421	-	100	99.698	Heterocephalus_glaber_male
ENSMAUG00000015902	Smarca5	98	99.799	ENSSTOG00000010683	SMARCA5	94	99.799	Ictidomys_tridecemlineatus
ENSMAUG00000015902	Smarca5	98	99.698	ENSJJAG00000014965	Smarca5	95	99.698	Jaculus_jaculus
ENSMAUG00000015902	Smarca5	97	95.459	ENSLACG00000007091	SMARCA5	97	95.459	Latimeria_chalumnae
ENSMAUG00000015902	Smarca5	97	92.183	ENSLOCG00000008966	SMARCA5	96	92.183	Lepisosteus_oculatus
ENSMAUG00000015902	Smarca5	98	99.698	ENSLAFG00000007795	SMARCA5	94	99.698	Loxodonta_africana
ENSMAUG00000015902	Smarca5	98	99.496	ENSMFAG00000043649	SMARCA5	94	99.496	Macaca_fascicularis
ENSMAUG00000015902	Smarca5	98	99.496	ENSMMUG00000000829	SMARCA5	97	99.367	Macaca_mulatta
ENSMAUG00000015902	Smarca5	98	99.496	ENSMNEG00000031916	SMARCA5	94	99.496	Macaca_nemestrina
ENSMAUG00000015902	Smarca5	98	99.496	ENSMLEG00000042393	SMARCA5	94	99.496	Mandrillus_leucophaeus
ENSMAUG00000015902	Smarca5	98	97.586	ENSMGAG00000003517	SMARCA5	99	97.586	Meleagris_gallopavo
ENSMAUG00000015902	Smarca5	98	99.496	ENSMICG00000003971	SMARCA5	99	97.898	Microcebus_murinus
ENSMAUG00000015902	Smarca5	98	99.597	ENSMOCG00000016986	-	94	99.597	Microtus_ochrogaster
ENSMAUG00000015902	Smarca5	98	99.094	ENSMODG00000000391	SMARCA5	95	99.094	Monodelphis_domestica
ENSMAUG00000015902	Smarca5	98	99.698	ENSMUSG00000031715	Smarca5	94	99.698	Mus_musculus
ENSMAUG00000015902	Smarca5	98	99.899	MGP_PahariEiJ_G0022862	Smarca5	94	99.899	Mus_pahari
ENSMAUG00000015902	Smarca5	98	99.799	ENSMLUG00000000468	SMARCA5	94	99.799	Myotis_lucifugus
ENSMAUG00000015902	Smarca5	98	99.899	ENSNGAG00000000441	Smarca5	94	99.899	Nannospalax_galili
ENSMAUG00000015902	Smarca5	98	99.496	ENSNLEG00000005383	SMARCA5	94	99.496	Nomascus_leucogenys
ENSMAUG00000015902	Smarca5	95	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSMAUG00000015902	Smarca5	88	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSMAUG00000015902	Smarca5	95	99.071	ENSOANG00000013921	SMARCA5	100	99.071	Ornithorhynchus_anatinus
ENSMAUG00000015902	Smarca5	95	99.897	ENSOCUG00000013042	SMARCA5	100	99.897	Oryctolagus_cuniculus
ENSMAUG00000015902	Smarca5	98	99.496	ENSOGAG00000009702	SMARCA5	94	99.496	Otolemur_garnettii
ENSMAUG00000015902	Smarca5	98	99.395	ENSOARG00000010589	SMARCA5	94	99.395	Ovis_aries
ENSMAUG00000015902	Smarca5	98	99.295	ENSPPAG00000028523	SMARCA5	99	99.295	Pan_paniscus
ENSMAUG00000015902	Smarca5	98	93.756	ENSPPRG00000004925	SMARCA5	94	94.663	Panthera_pardus
ENSMAUG00000015902	Smarca5	98	99.698	ENSPTIG00000020959	SMARCA5	95	99.698	Panthera_tigris_altaica
ENSMAUG00000015902	Smarca5	98	99.396	ENSPTRG00000016472	SMARCA5	99	99.396	Pan_troglodytes
ENSMAUG00000015902	Smarca5	98	99.496	ENSPANG00000001175	SMARCA5	94	99.496	Papio_anubis
ENSMAUG00000015902	Smarca5	96	90.676	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSMAUG00000015902	Smarca5	96	90.900	ENSPKIG00000015885	SMARCA5	100	91.134	Paramormyrops_kingsleyae
ENSMAUG00000015902	Smarca5	98	96.076	ENSPSIG00000004177	SMARCA5	99	96.076	Pelodiscus_sinensis
ENSMAUG00000015902	Smarca5	95	89.815	ENSPMGG00000012316	SMARCA5	100	89.815	Periophthalmus_magnuspinnatus
ENSMAUG00000015902	Smarca5	98	100.000	ENSPEMG00000008060	Smarca5	98	100.000	Peromyscus_maniculatus_bairdii
ENSMAUG00000015902	Smarca5	63	86.895	ENSPMAG00000008026	SMARCA5	99	86.895	Petromyzon_marinus
ENSMAUG00000015902	Smarca5	97	70.482	ENSPMAG00000006011	SMARCA5	81	85.440	Petromyzon_marinus
ENSMAUG00000015902	Smarca5	98	99.094	ENSPCIG00000003926	SMARCA5	95	99.094	Phascolarctos_cinereus
ENSMAUG00000015902	Smarca5	98	99.496	ENSPPYG00000015091	SMARCA5	94	99.496	Pongo_abelii
ENSMAUG00000015902	Smarca5	82	95.500	ENSPCAG00000014230	SMARCA5	83	95.500	Procavia_capensis
ENSMAUG00000015902	Smarca5	98	96.576	ENSPCOG00000026744	SMARCA5	99	95.976	Propithecus_coquereli
ENSMAUG00000015902	Smarca5	98	99.597	ENSPVAG00000006482	SMARCA5	95	99.597	Pteropus_vampyrus
ENSMAUG00000015902	Smarca5	97	90.010	ENSPNAG00000027824	SMARCA5	97	90.249	Pygocentrus_nattereri
ENSMAUG00000015902	Smarca5	98	99.799	ENSRNOG00000018149	Smarca5	99	99.799	Rattus_norvegicus
ENSMAUG00000015902	Smarca5	98	99.496	ENSRBIG00000044644	SMARCA5	94	99.496	Rhinopithecus_bieti
ENSMAUG00000015902	Smarca5	98	99.496	ENSRROG00000029591	SMARCA5	99	99.496	Rhinopithecus_roxellana
ENSMAUG00000015902	Smarca5	99	97.734	ENSSBOG00000036257	SMARCA5	96	97.734	Saimiri_boliviensis_boliviensis
ENSMAUG00000015902	Smarca5	98	99.094	ENSSHAG00000008464	SMARCA5	100	99.094	Sarcophilus_harrisii
ENSMAUG00000015902	Smarca5	98	89.970	ENSSFOG00015013252	SMARCA5	97	89.970	Scleropages_formosus
ENSMAUG00000015902	Smarca5	99	94.857	ENSSPUG00000007604	SMARCA5	99	96.566	Sphenodon_punctatus
ENSMAUG00000015902	Smarca5	98	99.698	ENSSSCG00000009047	SMARCA5	94	99.698	Sus_scrofa
ENSMAUG00000015902	Smarca5	98	96.781	ENSTGUG00000002408	SMARCA5	99	96.781	Taeniopygia_guttata
ENSMAUG00000015902	Smarca5	96	99.589	ENSUAMG00000023495	SMARCA5	93	99.589	Ursus_americanus
ENSMAUG00000015902	Smarca5	98	99.698	ENSUMAG00000015324	SMARCA5	96	99.698	Ursus_maritimus
ENSMAUG00000015902	Smarca5	98	99.396	ENSVPAG00000008982	SMARCA5	94	99.396	Vicugna_pacos
ENSMAUG00000015902	Smarca5	98	99.698	ENSVVUG00000017473	SMARCA5	94	99.698	Vulpes_vulpes
ENSMAUG00000015902	Smarca5	92	93.823	ENSXETG00000017566	smarca5	94	93.823	Xenopus_tropicalis