EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000016096 (Gene tree)
Gene ID: 101834179
Gene Symbol: R3hcc1
Alias: 1700020M16Rik
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 7474 bases
Position: chrKB708152.1:19328700-19336173
Accession: 101834179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000017173	R3H	PF01424.22	1.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000021123	-	1416	XM_013114027	ENSMAUP00000017173	471 (aa)	XP_012969481	-

Gene Model

Click here to download ENSMAUG00000016096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000016096's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000016096	R3hcc1	99	65.474	ENSG00000104679	R3HCC1	100	97.674	Homo_sapiens
ENSMAUG00000016096	R3hcc1	65	41.420	ENSAPOG00000003616	r3hcc1	62	45.775	Acanthochromis_polyacanthus
ENSMAUG00000016096	R3hcc1	99	63.889	ENSAMEG00000002963	R3HCC1	51	69.672	Ailuropoda_melanoleuca
ENSMAUG00000016096	R3hcc1	61	43.750	ENSACIG00000017144	r3hcc1	84	39.583	Amphilophus_citrinellus
ENSMAUG00000016096	R3hcc1	58	45.775	ENSAPEG00000003613	r3hcc1	66	45.775	Amphiprion_percula
ENSMAUG00000016096	R3hcc1	66	38.579	ENSATEG00000023860	r3hcc1	64	44.366	Anabas_testudineus
ENSMAUG00000016096	R3hcc1	99	66.387	ENSANAG00000036169	R3HCC1	56	70.611	Aotus_nancymaae
ENSMAUG00000016096	R3hcc1	99	65.263	ENSCJAG00000020118	R3HCC1	54	56.863	Callithrix_jacchus
ENSMAUG00000016096	R3hcc1	99	61.966	ENSCAFG00000009210	R3HCC1	94	61.538	Canis_familiaris
ENSMAUG00000016096	R3hcc1	90	56.009	ENSCAPG00000015813	R3HCC1	52	63.303	Cavia_aperea
ENSMAUG00000016096	R3hcc1	99	63.975	ENSCPOG00000009696	R3HCC1	55	68.846	Cavia_porcellus
ENSMAUG00000016096	R3hcc1	99	65.053	ENSCCAG00000037811	R3HCC1	53	69.412	Cebus_capucinus
ENSMAUG00000016096	R3hcc1	99	65.684	ENSCATG00000032971	R3HCC1	92	79.487	Cercocebus_atys
ENSMAUG00000016096	R3hcc1	98	66.595	ENSCLAG00000015556	R3HCC1	79	79.866	Chinchilla_lanigera
ENSMAUG00000016096	R3hcc1	99	62.179	ENSCHOG00000000396	R3HCC1	53	64.754	Choloepus_hoffmanni
ENSMAUG00000016096	R3hcc1	99	66.737	ENSCANG00000029441	R3HCC1	92	80.128	Colobus_angolensis_palliatus
ENSMAUG00000016096	R3hcc1	100	84.886	ENSCGRG00001014977	R3hcc1	100	86.128	Cricetulus_griseus_chok1gshd
ENSMAUG00000016096	R3hcc1	100	84.886	ENSCGRG00000004454	R3hcc1	100	86.128	Cricetulus_griseus_crigri
ENSMAUG00000016096	R3hcc1	68	46.980	ENSCSEG00000005748	r3hcc1	72	50.000	Cynoglossus_semilaevis
ENSMAUG00000016096	R3hcc1	97	32.314	ENSDARG00000099593	r3hcc1	84	43.972	Danio_rerio
ENSMAUG00000016096	R3hcc1	99	64.346	ENSDNOG00000007168	R3HCC1	51	70.082	Dasypus_novemcinctus
ENSMAUG00000016096	R3hcc1	99	63.783	ENSDORG00000026365	R3hcc1	52	67.054	Dipodomys_ordii
ENSMAUG00000016096	R3hcc1	99	63.462	ENSECAG00000025013	R3HCC1	57	65.891	Equus_caballus
ENSMAUG00000016096	R3hcc1	99	64.151	ENSEEUG00000011918	R3HCC1	96	62.025	Erinaceus_europaeus
ENSMAUG00000016096	R3hcc1	57	49.315	ENSELUG00000023650	r3hcc1	76	43.200	Esox_lucius
ENSMAUG00000016096	R3hcc1	99	64.957	ENSFCAG00000012395	R3HCC1	55	69.478	Felis_catus
ENSMAUG00000016096	R3hcc1	99	65.817	ENSFDAG00000001572	R3HCC1	99	65.393	Fukomys_damarensis
ENSMAUG00000016096	R3hcc1	65	37.500	ENSGMOG00000017590	-	83	37.500	Gadus_morhua
ENSMAUG00000016096	R3hcc1	97	33.190	ENSGAFG00000008747	-	63	48.227	Gambusia_affinis
ENSMAUG00000016096	R3hcc1	99	64.842	ENSGGOG00000013817	R3HCC1	58	69.804	Gorilla_gorilla
ENSMAUG00000016096	R3hcc1	100	64.000	ENSHGLG00000010517	R3HCC1	92	65.263	Heterocephalus_glaber_female
ENSMAUG00000016096	R3hcc1	100	64.000	ENSHGLG00100006388	R3HCC1	92	65.263	Heterocephalus_glaber_male
ENSMAUG00000016096	R3hcc1	69	40.782	ENSHCOG00000011745	r3hcc1	65	48.462	Hippocampus_comes
ENSMAUG00000016096	R3hcc1	68	44.000	ENSIPUG00000024504	r3hcc1	64	47.917	Ictalurus_punctatus
ENSMAUG00000016096	R3hcc1	82	74.699	ENSSTOG00000027130	R3HCC1	81	78.205	Ictidomys_tridecemlineatus
ENSMAUG00000016096	R3hcc1	99	72.327	ENSJJAG00000013075	R3hcc1	99	72.956	Jaculus_jaculus
ENSMAUG00000016096	R3hcc1	97	32.829	ENSLOCG00000015442	r3hcc1	72	47.518	Lepisosteus_oculatus
ENSMAUG00000016096	R3hcc1	99	62.733	ENSLAFG00000016137	R3HCC1	95	61.458	Loxodonta_africana
ENSMAUG00000016096	R3hcc1	99	65.684	ENSMFAG00000032894	R3HCC1	92	78.846	Macaca_fascicularis
ENSMAUG00000016096	R3hcc1	99	65.895	ENSMMUG00000016655	R3HCC1	54	58.824	Macaca_mulatta
ENSMAUG00000016096	R3hcc1	99	65.684	ENSMNEG00000043283	R3HCC1	92	79.487	Macaca_nemestrina
ENSMAUG00000016096	R3hcc1	99	65.895	ENSMLEG00000030147	R3HCC1	92	79.487	Mandrillus_leucophaeus
ENSMAUG00000016096	R3hcc1	58	45.270	ENSMAMG00000018146	r3hcc1	66	45.775	Mastacembelus_armatus
ENSMAUG00000016096	R3hcc1	99	42.616	ENSMGAG00000001356	R3HCC1	63	59.615	Meleagris_gallopavo
ENSMAUG00000016096	R3hcc1	99	66.456	ENSMICG00000011146	R3HCC1	54	58.140	Microcebus_murinus
ENSMAUG00000016096	R3hcc1	100	80.982	ENSMOCG00000018508	R3hcc1	100	80.573	Microtus_ochrogaster
ENSMAUG00000016096	R3hcc1	62	46.970	ENSMALG00000000731	r3hcc1	71	46.970	Monopterus_albus
ENSMAUG00000016096	R3hcc1	100	77.246	MGP_CAROLIEiJ_G0019467	R3hcc1	100	77.126	Mus_caroli
ENSMAUG00000016096	R3hcc1	100	76.647	ENSMUSG00000034194	R3hcc1	100	77.733	Mus_musculus
ENSMAUG00000016096	R3hcc1	100	74.556	MGP_PahariEiJ_G0030484	R3hcc1	56	79.505	Mus_pahari
ENSMAUG00000016096	R3hcc1	100	76.190	MGP_SPRETEiJ_G0020359	R3hcc1	100	77.264	Mus_spretus
ENSMAUG00000016096	R3hcc1	99	75.105	ENSNGAG00000016747	R3hcc1	99	76.842	Nannospalax_galili
ENSMAUG00000016096	R3hcc1	91	65.278	ENSNLEG00000015944	R3HCC1	85	64.583	Nomascus_leucogenys
ENSMAUG00000016096	R3hcc1	99	58.263	ENSOPRG00000013390	R3HCC1	57	60.311	Ochotona_princeps
ENSMAUG00000016096	R3hcc1	59	43.396	ENSORLG00000016816	r3hcc1	70	46.099	Oryzias_latipes
ENSMAUG00000016096	R3hcc1	59	43.396	ENSORLG00020012005	r3hcc1	70	46.099	Oryzias_latipes_hni
ENSMAUG00000016096	R3hcc1	59	44.025	ENSORLG00015007018	r3hcc1	70	46.809	Oryzias_latipes_hsok
ENSMAUG00000016096	R3hcc1	89	31.132	ENSOMEG00000000816	r3hcc1	69	43.972	Oryzias_melastigma
ENSMAUG00000016096	R3hcc1	99	65.053	ENSPPAG00000033165	R3HCC1	58	69.020	Pan_paniscus
ENSMAUG00000016096	R3hcc1	99	64.768	ENSPPRG00000002522	R3HCC1	57	68.675	Panthera_pardus
ENSMAUG00000016096	R3hcc1	92	62.187	ENSPTIG00000011230	R3HCC1	51	63.721	Panthera_tigris_altaica
ENSMAUG00000016096	R3hcc1	99	65.684	ENSPTRG00000020076	R3HCC1	51	70.445	Pan_troglodytes
ENSMAUG00000016096	R3hcc1	99	65.263	ENSPANG00000000453	R3HCC1	92	66.245	Papio_anubis
ENSMAUG00000016096	R3hcc1	90	33.803	ENSPKIG00000014426	-	71	48.936	Paramormyrops_kingsleyae
ENSMAUG00000016096	R3hcc1	56	48.252	ENSPKIG00000020397	-	66	48.936	Paramormyrops_kingsleyae
ENSMAUG00000016096	R3hcc1	100	86.542	ENSPEMG00000007118	R3hcc1	100	86.128	Peromyscus_maniculatus_bairdii
ENSMAUG00000016096	R3hcc1	96	33.043	ENSPFOG00000022301	r3hcc1	63	46.429	Poecilia_formosa
ENSMAUG00000016096	R3hcc1	96	32.684	ENSPLAG00000010794	r3hcc1	63	46.429	Poecilia_latipinna
ENSMAUG00000016096	R3hcc1	96	33.043	ENSPMEG00000022515	r3hcc1	63	46.429	Poecilia_mexicana
ENSMAUG00000016096	R3hcc1	96	33.406	ENSPREG00000000713	r3hcc1	90	33.476	Poecilia_reticulata
ENSMAUG00000016096	R3hcc1	70	81.410	ENSPCAG00000012229	R3HCC1	72	81.410	Procavia_capensis
ENSMAUG00000016096	R3hcc1	99	65.823	ENSPCOG00000027554	R3HCC1	93	78.205	Propithecus_coquereli
ENSMAUG00000016096	R3hcc1	61	44.898	ENSPNAG00000023875	r3hcc1	71	46.617	Pygocentrus_nattereri
ENSMAUG00000016096	R3hcc1	100	76.939	ENSRNOG00000016777	AABR07018321.1	82	76.531	Rattus_norvegicus
ENSMAUG00000016096	R3hcc1	99	66.316	ENSRBIG00000028045	R3HCC1	92	80.128	Rhinopithecus_bieti
ENSMAUG00000016096	R3hcc1	99	66.316	ENSRROG00000031126	R3HCC1	92	80.128	Rhinopithecus_roxellana
ENSMAUG00000016096	R3hcc1	99	64.842	ENSSBOG00000022590	R3HCC1	92	80.128	Saimiri_boliviensis_boliviensis
ENSMAUG00000016096	R3hcc1	51	84.524	ENSSHAG00000016526	-	50	84.524	Sarcophilus_harrisii
ENSMAUG00000016096	R3hcc1	50	53.333	ENSSFOG00015013507	r3hcc1	68	50.355	Scleropages_formosus
ENSMAUG00000016096	R3hcc1	61	46.154	ENSSLDG00000019031	r3hcc1	65	46.099	Seriola_lalandi_dorsalis
ENSMAUG00000016096	R3hcc1	58	48.611	ENSSPAG00000013497	r3hcc1	66	48.592	Stegastes_partitus
ENSMAUG00000016096	R3hcc1	100	59.244	ENSSSCG00000037347	-	90	58.526	Sus_scrofa
ENSMAUG00000016096	R3hcc1	99	65.745	ENSSSCG00000039915	-	92	64.894	Sus_scrofa
ENSMAUG00000016096	R3hcc1	63	39.286	ENSTRUG00000015880	r3hcc1	66	42.424	Takifugu_rubripes
ENSMAUG00000016096	R3hcc1	99	62.633	ENSUAMG00000007344	R3HCC1	55	67.623	Ursus_americanus
ENSMAUG00000016096	R3hcc1	93	33.108	ENSXCOG00000017626	r3hcc1	88	32.522	Xiphophorus_couchianus
ENSMAUG00000016096	R3hcc1	97	33.550	ENSXMAG00000018375	r3hcc1	91	32.794	Xiphophorus_maculatus