EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000016253 (Gene tree)
Gene ID: 101825173
Gene Symbol: Gtf3a
Alias: 2010015D03Rik|2610111I01Rik|5330403M05Rik
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 34358 bases
Position: chrKB708272.1:4335782-4370139
Accession: 101825173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000017363	zf-C2H2	PF00096.26	2e-37	1	6
ENSMAUP00000017363	zf-C2H2	PF00096.26	2e-37	2	6
ENSMAUP00000017363	zf-C2H2	PF00096.26	2e-37	3	6
ENSMAUP00000017363	zf-C2H2	PF00096.26	2e-37	4	6
ENSMAUP00000017363	zf-C2H2	PF00096.26	2e-37	5	6
ENSMAUP00000017363	zf-C2H2	PF00096.26	2e-37	6	6
ENSMAUP00000017369	zf-C2H2	PF00096.26	3.3e-37	1	6
ENSMAUP00000017369	zf-C2H2	PF00096.26	3.3e-37	2	6
ENSMAUP00000017369	zf-C2H2	PF00096.26	3.3e-37	3	6
ENSMAUP00000017369	zf-C2H2	PF00096.26	3.3e-37	4	6
ENSMAUP00000017369	zf-C2H2	PF00096.26	3.3e-37	5	6
ENSMAUP00000017369	zf-C2H2	PF00096.26	3.3e-37	6	6
ENSMAUP00000017363	zf-met	PF12874.7	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000021319	-	1314	XM_005083206	ENSMAUP00000017369	386 (aa)	XP_005083263	-
ENSMAUT00000021313	-	1110	-	ENSMAUP00000017363	369 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000016253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000016253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000016253	Gtf3a	71	34.231	ENSMAUG00000008812	Zfp583	67	33.585
ENSMAUG00000016253	Gtf3a	62	35.664	ENSMAUG00000021273	-	99	35.664
ENSMAUG00000016253	Gtf3a	72	36.765	ENSMAUG00000000179	Zfp879	72	36.765
ENSMAUG00000016253	Gtf3a	81	40.789	ENSMAUG00000009331	-	70	40.789
ENSMAUG00000016253	Gtf3a	72	34.127	ENSMAUG00000007597	2610008E11Rik	67	34.127
ENSMAUG00000016253	Gtf3a	69	31.923	ENSMAUG00000005691	-	70	34.818
ENSMAUG00000016253	Gtf3a	77	34.667	ENSMAUG00000004844	-	58	34.667
ENSMAUG00000016253	Gtf3a	80	35.833	ENSMAUG00000007713	Zfp868	89	35.833
ENSMAUG00000016253	Gtf3a	76	36.975	ENSMAUG00000016437	-	98	40.000
ENSMAUG00000016253	Gtf3a	80	38.843	ENSMAUG00000008036	Wt1	50	35.106
ENSMAUG00000016253	Gtf3a	73	38.596	ENSMAUG00000014247	-	85	38.596
ENSMAUG00000016253	Gtf3a	70	38.793	ENSMAUG00000000939	-	73	38.793
ENSMAUG00000016253	Gtf3a	69	32.530	ENSMAUG00000011903	Maz	62	31.527
ENSMAUG00000016253	Gtf3a	75	34.682	ENSMAUG00000015438	Zfp64	66	34.682
ENSMAUG00000016253	Gtf3a	73	36.946	ENSMAUG00000009945	Zfp672	91	36.585
ENSMAUG00000016253	Gtf3a	72	36.364	ENSMAUG00000007745	Zfp1	62	36.364
ENSMAUG00000016253	Gtf3a	73	37.500	ENSMAUG00000003007	Zfp628	53	36.364
ENSMAUG00000016253	Gtf3a	81	34.167	ENSMAUG00000005776	Repin1	84	36.279
ENSMAUG00000016253	Gtf3a	54	38.372	ENSMAUG00000005232	Zfp784	52	32.787
ENSMAUG00000016253	Gtf3a	72	35.862	ENSMAUG00000000735	Zfp354a	71	35.193
ENSMAUG00000016253	Gtf3a	73	33.455	ENSMAUG00000010647	Zfp882	70	32.841
ENSMAUG00000016253	Gtf3a	72	37.975	ENSMAUG00000005974	-	61	37.975
ENSMAUG00000016253	Gtf3a	80	31.410	ENSMAUG00000006768	Prdm5	76	31.410
ENSMAUG00000016253	Gtf3a	71	38.835	ENSMAUG00000001536	Zfp39	59	37.344
ENSMAUG00000016253	Gtf3a	73	41.111	ENSMAUG00000009641	Zfp768	50	41.111
ENSMAUG00000016253	Gtf3a	79	40.244	ENSMAUG00000017074	Zfp26	80	40.244
ENSMAUG00000016253	Gtf3a	86	37.079	ENSMAUG00000015263	-	67	37.079

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000016253	Gtf3a	98	75.069	ENSAMEG00000015824	GTF3A	92	79.940	Ailuropoda_melanoleuca
ENSMAUG00000016253	Gtf3a	95	76.638	ENSBTAG00000012600	GTF3A	99	75.698	Bos_taurus
ENSMAUG00000016253	Gtf3a	95	76.923	ENSCAFG00000006794	GTF3A	92	79.403	Canis_familiaris
ENSMAUG00000016253	Gtf3a	95	77.493	ENSCHIG00000010341	-	99	76.536	Capra_hircus
ENSMAUG00000016253	Gtf3a	95	77.493	ENSCHIG00000021040	-	84	76.536	Capra_hircus
ENSMAUG00000016253	Gtf3a	87	80.435	ENSTSYG00000004206	GTF3A	91	82.680	Carlito_syrichta
ENSMAUG00000016253	Gtf3a	88	78.378	ENSCAPG00000015862	GTF3A	98	78.378	Cavia_aperea
ENSMAUG00000016253	Gtf3a	89	77.039	ENSCPOG00000010143	GTF3A	98	81.410	Cavia_porcellus
ENSMAUG00000016253	Gtf3a	84	81.672	ENSCLAG00000003912	GTF3A	95	83.280	Chinchilla_lanigera
ENSMAUG00000016253	Gtf3a	98	75.549	ENSDNOG00000037405	-	80	79.646	Dasypus_novemcinctus
ENSMAUG00000016253	Gtf3a	72	80.693	ENSETEG00000003225	GTF3A	77	75.536	Echinops_telfairi
ENSMAUG00000016253	Gtf3a	99	75.543	ENSEASG00005022495	-	75	80.838	Equus_asinus_asinus
ENSMAUG00000016253	Gtf3a	88	71.605	ENSEASG00005013216	-	86	71.605	Equus_asinus_asinus
ENSMAUG00000016253	Gtf3a	94	73.121	ENSECAG00000024825	-	79	73.121	Equus_caballus
ENSMAUG00000016253	Gtf3a	99	76.087	ENSECAG00000014803	GTF3A	86	76.610	Equus_caballus
ENSMAUG00000016253	Gtf3a	98	74.309	ENSEEUG00000004307	GTF3A	87	77.183	Erinaceus_europaeus
ENSMAUG00000016253	Gtf3a	98	77.562	ENSFCAG00000006982	GTF3A	84	77.562	Felis_catus
ENSMAUG00000016253	Gtf3a	84	83.280	ENSFDAG00000016841	GTF3A	96	83.601	Fukomys_damarensis
ENSMAUG00000016253	Gtf3a	84	82.372	ENSHGLG00000004173	GTF3A	97	83.013	Heterocephalus_glaber_female
ENSMAUG00000016253	Gtf3a	84	82.372	ENSHGLG00100011561	GTF3A	97	83.013	Heterocephalus_glaber_male
ENSMAUG00000016253	Gtf3a	84	81.410	ENSSTOG00000013853	GTF3A	99	82.372	Ictidomys_tridecemlineatus
ENSMAUG00000016253	Gtf3a	90	76.433	ENSJJAG00000011501	Gtf3a	100	76.433	Jaculus_jaculus
ENSMAUG00000016253	Gtf3a	98	69.459	ENSLAFG00000027315	GTF3A	99	70.572	Loxodonta_africana
ENSMAUG00000016253	Gtf3a	100	74.394	ENSMICG00000014763	GTF3A	91	81.250	Microcebus_murinus
ENSMAUG00000016253	Gtf3a	91	87.798	MGP_CAROLIEiJ_G0028031	Gtf3a	99	84.765	Mus_caroli
ENSMAUG00000016253	Gtf3a	91	87.500	ENSMUSG00000016503	Gtf3a	99	84.488	Mus_musculus
ENSMAUG00000016253	Gtf3a	91	88.131	MGP_PahariEiJ_G0024597	Gtf3a	99	85.359	Mus_pahari
ENSMAUG00000016253	Gtf3a	96	85.593	MGP_SPRETEiJ_G0029029	Gtf3a	99	84.488	Mus_spretus
ENSMAUG00000016253	Gtf3a	99	75.749	ENSMPUG00000005835	GTF3A	98	76.667	Mustela_putorius_furo
ENSMAUG00000016253	Gtf3a	89	81.515	ENSMLUG00000002158	GTF3A	99	81.515	Myotis_lucifugus
ENSMAUG00000016253	Gtf3a	98	76.712	ENSNLEG00000000331	GTF3A	99	78.177	Nomascus_leucogenys
ENSMAUG00000016253	Gtf3a	89	55.046	ENSMEUG00000010089	GTF3A	89	58.278	Notamacropus_eugenii
ENSMAUG00000016253	Gtf3a	92	73.156	ENSOPRG00000000854	-	84	73.156	Ochotona_princeps
ENSMAUG00000016253	Gtf3a	97	77.901	ENSODEG00000006725	GTF3A	85	79.282	Octodon_degus
ENSMAUG00000016253	Gtf3a	92	81.065	ENSOCUG00000011713	GTF3A	77	81.065	Oryctolagus_cuniculus
ENSMAUG00000016253	Gtf3a	98	76.648	ENSOGAG00000014589	GTF3A	92	81.845	Otolemur_garnettii
ENSMAUG00000016253	Gtf3a	95	73.504	ENSOARG00000012551	GTF3A	98	72.626	Ovis_aries
ENSMAUG00000016253	Gtf3a	98	76.731	ENSPPRG00000002368	GTF3A	99	77.222	Panthera_pardus
ENSMAUG00000016253	Gtf3a	88	77.027	ENSPTIG00000018958	GTF3A	81	77.627	Panthera_tigris_altaica
ENSMAUG00000016253	Gtf3a	85	54.065	ENSPSIG00000011722	GTF3A	84	56.769	Pelodiscus_sinensis
ENSMAUG00000016253	Gtf3a	96	77.311	ENSPPYG00000005235	GTF3A	99	78.371	Pongo_abelii
ENSMAUG00000016253	Gtf3a	98	76.374	ENSPCOG00000016742	GTF3A	76	81.845	Propithecus_coquereli
ENSMAUG00000016253	Gtf3a	93	78.488	ENSPVAG00000012837	GTF3A	79	80.000	Pteropus_vampyrus
ENSMAUG00000016253	Gtf3a	98	70.685	ENSRROG00000043264	GTF3A	99	71.823	Rhinopithecus_roxellana
ENSMAUG00000016253	Gtf3a	89	73.089	ENSSHAG00000016965	GTF3A	91	75.312	Sarcophilus_harrisii
ENSMAUG00000016253	Gtf3a	84	70.096	ENSSARG00000010692	GTF3A	86	70.740	Sorex_araneus
ENSMAUG00000016253	Gtf3a	80	72.819	ENSSPUG00000005307	GTF3A	88	68.085	Sphenodon_punctatus
ENSMAUG00000016253	Gtf3a	78	44.291	ENSTRUG00000005241	gtf3ab	90	43.671	Takifugu_rubripes
ENSMAUG00000016253	Gtf3a	77	83.203	ENSTBEG00000012075	GTF3A	61	83.203	Tupaia_belangeri
ENSMAUG00000016253	Gtf3a	96	70.255	ENSTTRG00000008538	GTF3A	88	69.337	Tursiops_truncatus
ENSMAUG00000016253	Gtf3a	98	75.623	ENSUAMG00000019189	GTF3A	92	80.539	Ursus_americanus
ENSMAUG00000016253	Gtf3a	90	75.150	ENSUMAG00000016941	GTF3A	99	79.667	Ursus_maritimus
ENSMAUG00000016253	Gtf3a	80	78.231	ENSVPAG00000004995	GTF3A	98	78.231	Vicugna_pacos
ENSMAUG00000016253	Gtf3a	98	73.352	ENSVVUG00000009197	GTF3A	99	74.515	Vulpes_vulpes