EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000016313 (Gene tree)
Gene ID: 101828632
Gene Symbol: Pabpc4l
Alias: -
Full Name: poly(A) binding protein cytoplasmic 4 like
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 1113 bases
Position: chrKB708146.1:2566483-2567595
Accession: 101828632
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000017438	RRM_5	PF13893.6	5.4e-11	1	2
ENSMAUP00000017438	RRM_5	PF13893.6	5.4e-11	2	2
ENSMAUP00000017438	RRM_1	PF00076.22	3.2e-84	1	4
ENSMAUP00000017438	RRM_1	PF00076.22	3.2e-84	2	4
ENSMAUP00000017438	RRM_1	PF00076.22	3.2e-84	3	4
ENSMAUP00000017438	RRM_1	PF00076.22	3.2e-84	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000021388	-	1113	XM_005069670	ENSMAUP00000017438	370 (aa)	XP_005069727	A0A1U7QNB0

Gene Model

Click here to download ENSMAUG00000016313's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000016313's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000016313	Pabpc4l	99	63.388	ENSMAUG00000003031	Pabpc6	62	63.388
ENSMAUG00000016313	Pabpc4l	96	34.940	ENSMAUG00000011955	Elavl2	86	34.940
ENSMAUG00000016313	Pabpc4l	93	59.322	ENSMAUG00000004089	-	95	59.322
ENSMAUG00000016313	Pabpc4l	99	55.763	ENSMAUG00000019763	-	60	55.763
ENSMAUG00000016313	Pabpc4l	83	61.667	ENSMAUG00000001295	-	62	61.667
ENSMAUG00000016313	Pabpc4l	97	63.333	ENSMAUG00000017991	Pabpc2	60	63.333
ENSMAUG00000016313	Pabpc4l	96	33.871	ENSMAUG00000016478	Elavl3	88	30.065
ENSMAUG00000016313	Pabpc4l	98	62.912	ENSMAUG00000003523	Pabpc1	58	62.912
ENSMAUG00000016313	Pabpc4l	85	38.158	ENSMAUG00000016488	-	59	38.158
ENSMAUG00000016313	Pabpc4l	96	38.251	ENSMAUG00000015266	Sf3b4	54	38.251

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000016313	Pabpc4l	100	83.243	ENSG00000254535	PABPC4L	100	83.243	Homo_sapiens
ENSMAUG00000016313	Pabpc4l	100	82.432	ENSANAG00000017199	PABPC4L	87	82.432	Aotus_nancymaae
ENSMAUG00000016313	Pabpc4l	99	81.301	ENSBTAG00000046902	PABPC4L	99	81.301	Bos_taurus
ENSMAUG00000016313	Pabpc4l	100	82.973	ENSCJAG00000045332	PABPC4L	86	82.973	Callithrix_jacchus
ENSMAUG00000016313	Pabpc4l	99	69.022	ENSCAFG00020019182	-	54	69.022	Canis_lupus_dingo
ENSMAUG00000016313	Pabpc4l	99	81.301	ENSCHIG00000007231	PABPC4L	99	81.301	Capra_hircus
ENSMAUG00000016313	Pabpc4l	98	74.627	ENSCAPG00000000555	PABPC4L	100	74.627	Cavia_aperea
ENSMAUG00000016313	Pabpc4l	100	71.351	ENSCPOG00000033167	PABPC4L	100	71.351	Cavia_porcellus
ENSMAUG00000016313	Pabpc4l	100	82.703	ENSCCAG00000031681	PABPC4L	86	82.703	Cebus_capucinus
ENSMAUG00000016313	Pabpc4l	100	77.838	ENSCLAG00000017628	PABPC4L	100	77.838	Chinchilla_lanigera
ENSMAUG00000016313	Pabpc4l	100	81.081	ENSCANG00000037677	PABPC4L	100	81.081	Colobus_angolensis_palliatus
ENSMAUG00000016313	Pabpc4l	100	97.568	ENSCGRG00001002070	Pabpc4l	100	97.568	Cricetulus_griseus_chok1gshd
ENSMAUG00000016313	Pabpc4l	100	97.568	ENSCGRG00000020086	Pabpc4l	100	97.568	Cricetulus_griseus_crigri
ENSMAUG00000016313	Pabpc4l	100	80.541	ENSDNOG00000031077	PABPC4L	95	80.541	Dasypus_novemcinctus
ENSMAUG00000016313	Pabpc4l	99	79.404	ENSEASG00005007883	PABPC4L	99	79.404	Equus_asinus_asinus
ENSMAUG00000016313	Pabpc4l	99	79.675	ENSECAG00000031416	PABPC4L	99	79.675	Equus_caballus
ENSMAUG00000016313	Pabpc4l	99	79.946	ENSFCAG00000028270	PABPC4L	99	79.946	Felis_catus
ENSMAUG00000016313	Pabpc4l	99	74.797	ENSFDAG00000019606	PABPC4L	99	74.797	Fukomys_damarensis
ENSMAUG00000016313	Pabpc4l	100	82.703	ENSGGOG00000024991	PABPC4L	100	82.703	Gorilla_gorilla
ENSMAUG00000016313	Pabpc4l	99	76.694	ENSHGLG00000020104	PABPC4L	99	76.694	Heterocephalus_glaber_female
ENSMAUG00000016313	Pabpc4l	99	76.694	ENSHGLG00100020648	PABPC4L	99	76.694	Heterocephalus_glaber_male
ENSMAUG00000016313	Pabpc4l	100	82.749	ENSSTOG00000019472	PABPC4L	99	82.749	Ictidomys_tridecemlineatus
ENSMAUG00000016313	Pabpc4l	99	81.301	ENSJJAG00000004090	Pabpc4l	99	81.301	Jaculus_jaculus
ENSMAUG00000016313	Pabpc4l	100	81.622	ENSMICG00000029683	PABPC4L	100	81.622	Microcebus_murinus
ENSMAUG00000016313	Pabpc4l	100	95.676	ENSMOCG00000007551	Pabpc4l	100	95.676	Microtus_ochrogaster
ENSMAUG00000016313	Pabpc4l	100	88.108	MGP_CAROLIEiJ_G0024968	Pabpc4l	100	92.000	Mus_caroli
ENSMAUG00000016313	Pabpc4l	100	88.378	ENSMUSG00000090919	Pabpc4l	100	92.000	Mus_musculus
ENSMAUG00000016313	Pabpc4l	100	88.649	MGP_PahariEiJ_G0026409	Pabpc4l	100	90.000	Mus_pahari
ENSMAUG00000016313	Pabpc4l	100	87.838	MGP_SPRETEiJ_G0025903	Pabpc4l	100	92.000	Mus_spretus
ENSMAUG00000016313	Pabpc4l	99	73.984	ENSMLUG00000008254	PABPC4L	99	73.984	Myotis_lucifugus
ENSMAUG00000016313	Pabpc4l	100	87.838	ENSNGAG00000001502	Pabpc4l	100	87.838	Nannospalax_galili
ENSMAUG00000016313	Pabpc4l	100	82.973	ENSNLEG00000019300	PABPC4L	100	82.973	Nomascus_leucogenys
ENSMAUG00000016313	Pabpc4l	100	75.405	ENSOGAG00000026166	PABPC4L	100	75.405	Otolemur_garnettii
ENSMAUG00000016313	Pabpc4l	99	83.591	ENSPPAG00000043745	PABPC4L	93	83.591	Pan_paniscus
ENSMAUG00000016313	Pabpc4l	99	79.675	ENSPPRG00000018628	PABPC4L	99	79.675	Panthera_pardus
ENSMAUG00000016313	Pabpc4l	99	79.946	ENSPTIG00000010106	PABPC4L	99	79.946	Panthera_tigris_altaica
ENSMAUG00000016313	Pabpc4l	99	83.591	ENSPTRG00000045513	-	77	83.591	Pan_troglodytes
ENSMAUG00000016313	Pabpc4l	100	94.865	ENSPEMG00000012565	Pabpc4l	100	94.865	Peromyscus_maniculatus_bairdii
ENSMAUG00000016313	Pabpc4l	100	82.162	ENSPCOG00000025578	PABPC4L	100	82.162	Propithecus_coquereli
ENSMAUG00000016313	Pabpc4l	100	89.189	ENSRNOG00000029749	Pabpc4l	100	89.189	Rattus_norvegicus
ENSMAUG00000016313	Pabpc4l	100	80.541	ENSRBIG00000030229	PABPC4L	100	80.541	Rhinopithecus_bieti
ENSMAUG00000016313	Pabpc4l	100	80.270	ENSRROG00000020367	PABPC4L	100	80.270	Rhinopithecus_roxellana
ENSMAUG00000016313	Pabpc4l	100	81.892	ENSSBOG00000016382	PABPC4L	100	81.892	Saimiri_boliviensis_boliviensis
ENSMAUG00000016313	Pabpc4l	99	74.526	ENSSSCG00000009067	PABPC4L	99	74.526	Sus_scrofa
ENSMAUG00000016313	Pabpc4l	99	79.404	ENSUAMG00000001289	PABPC4L	99	79.404	Ursus_americanus
ENSMAUG00000016313	Pabpc4l	99	79.404	ENSUMAG00000014887	PABPC4L	99	79.404	Ursus_maritimus
ENSMAUG00000016313	Pabpc4l	89	70.122	ENSVVUG00000011060	-	75	70.122	Vulpes_vulpes