EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000016428 (Gene tree)
Gene ID: 101830017
Gene Symbol: Fubp1
Alias: -
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 26440 bases
Position: chrKB708279.1:3415297-3441736
Accession: 101830017
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000017744	KH_1	PF00013.29	1.3e-69	1	4
ENSMAUP00000017744	KH_1	PF00013.29	1.3e-69	2	4
ENSMAUP00000017744	KH_1	PF00013.29	1.3e-69	3	4
ENSMAUP00000017744	KH_1	PF00013.29	1.3e-69	4	4
ENSMAUP00000017726	KH_1	PF00013.29	1.6e-69	1	4
ENSMAUP00000017726	KH_1	PF00013.29	1.6e-69	2	4
ENSMAUP00000017726	KH_1	PF00013.29	1.6e-69	3	4
ENSMAUP00000017726	KH_1	PF00013.29	1.6e-69	4	4
ENSMAUP00000017753	KH_1	PF00013.29	6.4e-17	1	1
ENSMAUP00000017744	KH_2	PF07650.17	1.4e-22	1	2
ENSMAUP00000017744	KH_2	PF07650.17	1.4e-22	2	2
ENSMAUP00000017726	KH_2	PF07650.17	1.7e-22	1	2
ENSMAUP00000017726	KH_2	PF07650.17	1.7e-22	2	2
ENSMAUP00000017753	KH_2	PF07650.17	1.7e-06	1	1
ENSMAUP00000017744	DUF1897	PF09005.10	5.2e-12	1	2
ENSMAUP00000017744	DUF1897	PF09005.10	5.2e-12	2	2
ENSMAUP00000017726	DUF1897	PF09005.10	5.9e-12	1	2
ENSMAUP00000017726	DUF1897	PF09005.10	5.9e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000021698	-	1899	-	ENSMAUP00000017744	632 (aa)	-	-
ENSMAUT00000021680	-	6725	XM_005083616	ENSMAUP00000017726	658 (aa)	XP_005083673	A0A1U7QYD7
ENSMAUT00000021707	-	447	-	ENSMAUP00000017753	149 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000016428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000016428's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000016428	Fubp1	92	53.734	ENSMAUG00000012513	Fubp3	87	46.897
ENSMAUG00000016428	Fubp1	90	59.713	ENSMAUG00000018966	Khsrp	61	67.529
ENSMAUG00000016428	Fubp1	60	34.524	ENSMAUG00000021064	Pcbp4	74	34.524
ENSMAUG00000016428	Fubp1	57	33.333	ENSMAUG00000007036	Pcbp3	66	31.858
ENSMAUG00000016428	Fubp1	51	30.667	ENSMAUG00000008302	Igf2bp2	53	30.263

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000016428	Fubp1	100	98.784	ENSG00000162613	FUBP1	100	98.784	Homo_sapiens
ENSMAUG00000016428	Fubp1	100	69.369	ENSAPOG00000014845	fubp1	70	75.652	Acanthochromis_polyacanthus
ENSMAUG00000016428	Fubp1	98	99.315	ENSAMEG00000007372	FUBP1	99	95.516	Ailuropoda_melanoleuca
ENSMAUG00000016428	Fubp1	98	70.946	ENSACIG00000020024	fubp1	69	73.904	Amphilophus_citrinellus
ENSMAUG00000016428	Fubp1	98	70.946	ENSAPEG00000012232	fubp1	72	76.856	Amphiprion_percula
ENSMAUG00000016428	Fubp1	99	71.667	ENSATEG00000018619	fubp1	70	77.974	Anabas_testudineus
ENSMAUG00000016428	Fubp1	98	96.599	ENSAPLG00000005965	FUBP1	100	96.700	Anas_platyrhynchos
ENSMAUG00000016428	Fubp1	98	95.918	ENSACAG00000006310	FUBP1	96	86.754	Anolis_carolinensis
ENSMAUG00000016428	Fubp1	98	71.450	ENSACLG00000006708	fubp1	72	78.194	Astatotilapia_calliptera
ENSMAUG00000016428	Fubp1	100	78.000	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSMAUG00000016428	Fubp1	100	98.632	ENSCJAG00000007062	FUBP1	100	98.632	Callithrix_jacchus
ENSMAUG00000016428	Fubp1	98	99.315	ENSCAFG00000020361	FUBP1	99	98.916	Canis_familiaris
ENSMAUG00000016428	Fubp1	98	98.630	ENSTSYG00000000148	FUBP1	100	98.382	Carlito_syrichta
ENSMAUG00000016428	Fubp1	57	98.851	ENSCAPG00000011052	-	67	98.535	Cavia_aperea
ENSMAUG00000016428	Fubp1	100	99.329	ENSCPOG00000002757	FUBP1	100	99.329	Cavia_porcellus
ENSMAUG00000016428	Fubp1	98	97.744	ENSCCAG00000036537	FUBP1	100	84.393	Cebus_capucinus
ENSMAUG00000016428	Fubp1	100	98.632	ENSCATG00000042126	FUBP1	100	98.632	Cercocebus_atys
ENSMAUG00000016428	Fubp1	100	98.480	ENSCLAG00000005621	FUBP1	100	99.359	Chinchilla_lanigera
ENSMAUG00000016428	Fubp1	98	99.315	ENSCSAG00000001402	FUBP1	99	98.762	Chlorocebus_sabaeus
ENSMAUG00000016428	Fubp1	100	98.632	ENSCHOG00000008177	FUBP1	100	98.632	Choloepus_hoffmanni
ENSMAUG00000016428	Fubp1	100	98.632	ENSCGRG00001007103	Fubp1	100	98.632	Cricetulus_griseus_chok1gshd
ENSMAUG00000016428	Fubp1	100	99.329	ENSCGRG00000003372	Fubp1	100	99.353	Cricetulus_griseus_crigri
ENSMAUG00000016428	Fubp1	98	70.946	ENSCSEG00000021412	fubp1	70	76.535	Cynoglossus_semilaevis
ENSMAUG00000016428	Fubp1	98	70.946	ENSCVAG00000014487	fubp1	60	84.986	Cyprinodon_variegatus
ENSMAUG00000016428	Fubp1	100	71.812	ENSDARG00000029248	fubp1	70	76.989	Danio_rerio
ENSMAUG00000016428	Fubp1	69	73.077	ENSDNOG00000034565	-	83	72.093	Dasypus_novemcinctus
ENSMAUG00000016428	Fubp1	100	98.784	ENSDORG00000016534	Fubp1	100	98.784	Dipodomys_ordii
ENSMAUG00000016428	Fubp1	77	97.695	ENSETEG00000000948	-	62	97.695	Echinops_telfairi
ENSMAUG00000016428	Fubp1	84	46.691	ENSEBUG00000016143	fubp1	64	65.152	Eptatretus_burgeri
ENSMAUG00000016428	Fubp1	98	99.315	ENSEEUG00000001287	FUBP1	100	85.106	Erinaceus_europaeus
ENSMAUG00000016428	Fubp1	98	78.231	ENSELUG00000007990	fubp1	70	74.514	Esox_lucius
ENSMAUG00000016428	Fubp1	98	96.599	ENSFALG00000005768	FUBP1	98	95.370	Ficedula_albicollis
ENSMAUG00000016428	Fubp1	100	98.176	ENSFDAG00000014210	FUBP1	100	99.315	Fukomys_damarensis
ENSMAUG00000016428	Fubp1	98	71.472	ENSFHEG00000005230	fubp1	70	78.603	Fundulus_heteroclitus
ENSMAUG00000016428	Fubp1	98	66.616	ENSGMOG00000003370	fubp1	70	70.175	Gadus_morhua
ENSMAUG00000016428	Fubp1	100	94.667	ENSGALG00000008939	FUBP1	99	95.988	Gallus_gallus
ENSMAUG00000016428	Fubp1	98	70.946	ENSGAFG00000020972	fubp1	91	78.005	Gambusia_affinis
ENSMAUG00000016428	Fubp1	98	70.274	ENSGACG00000016563	fubp1	70	76.096	Gasterosteus_aculeatus
ENSMAUG00000016428	Fubp1	98	70.946	ENSHBUG00000009835	fubp1	85	76.923	Haplochromis_burtoni
ENSMAUG00000016428	Fubp1	100	98.784	ENSHGLG00000008415	-	100	99.359	Heterocephalus_glaber_female
ENSMAUG00000016428	Fubp1	99	80.560	ENSHGLG00000002808	-	72	90.789	Heterocephalus_glaber_female
ENSMAUG00000016428	Fubp1	100	98.784	ENSHGLG00100003417	-	100	98.784	Heterocephalus_glaber_male
ENSMAUG00000016428	Fubp1	99	81.182	ENSHGLG00100001414	-	72	91.447	Heterocephalus_glaber_male
ENSMAUG00000016428	Fubp1	98	70.270	ENSHCOG00000000910	fubp1	70	74.947	Hippocampus_comes
ENSMAUG00000016428	Fubp1	98	79.592	ENSIPUG00000009896	fubp1	70	77.056	Ictalurus_punctatus
ENSMAUG00000016428	Fubp1	100	99.392	ENSSTOG00000014312	FUBP1	100	99.392	Ictidomys_tridecemlineatus
ENSMAUG00000016428	Fubp1	98	99.315	ENSJJAG00000020069	Fubp1	100	99.315	Jaculus_jaculus
ENSMAUG00000016428	Fubp1	98	70.946	ENSKMAG00000018897	fubp1	69	76.432	Kryptolebias_marmoratus
ENSMAUG00000016428	Fubp1	98	70.270	ENSLBEG00000012700	fubp1	72	75.000	Labrus_bergylta
ENSMAUG00000016428	Fubp1	94	82.270	ENSLOCG00000003745	fubp1	92	74.180	Lepisosteus_oculatus
ENSMAUG00000016428	Fubp1	98	99.315	ENSLAFG00000003273	FUBP1	100	99.295	Loxodonta_africana
ENSMAUG00000016428	Fubp1	100	98.632	ENSMFAG00000031825	FUBP1	100	98.632	Macaca_fascicularis
ENSMAUG00000016428	Fubp1	100	98.632	ENSMMUG00000002899	FUBP1	100	98.632	Macaca_mulatta
ENSMAUG00000016428	Fubp1	100	98.632	ENSMNEG00000045212	FUBP1	100	98.632	Macaca_nemestrina
ENSMAUG00000016428	Fubp1	98	72.109	ENSMAMG00000007489	fubp1	75	54.658	Mastacembelus_armatus
ENSMAUG00000016428	Fubp1	98	71.516	ENSMZEG00005024298	fubp1	70	78.603	Maylandia_zebra
ENSMAUG00000016428	Fubp1	98	96.599	ENSMGAG00000009424	FUBP1	99	96.217	Meleagris_gallopavo
ENSMAUG00000016428	Fubp1	100	98.784	ENSMOCG00000014751	Fubp1	100	98.784	Microtus_ochrogaster
ENSMAUG00000016428	Fubp1	94	73.818	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSMAUG00000016428	Fubp1	100	85.799	ENSMODG00000020804	FUBP1	100	90.141	Monodelphis_domestica
ENSMAUG00000016428	Fubp1	98	70.946	ENSMALG00000015173	fubp1	70	77.074	Monopterus_albus
ENSMAUG00000016428	Fubp1	100	99.329	MGP_CAROLIEiJ_G0025740	Fubp1	100	99.329	Mus_caroli
ENSMAUG00000016428	Fubp1	100	98.658	ENSMUSG00000028034	Fubp1	100	98.658	Mus_musculus
ENSMAUG00000016428	Fubp1	100	99.329	MGP_PahariEiJ_G0027191	Fubp1	100	99.329	Mus_pahari
ENSMAUG00000016428	Fubp1	100	99.329	MGP_SPRETEiJ_G0026693	Fubp1	100	99.329	Mus_spretus
ENSMAUG00000016428	Fubp1	98	99.315	ENSMLUG00000014802	FUBP1	99	94.925	Myotis_lucifugus
ENSMAUG00000016428	Fubp1	100	98.658	ENSNGAG00000014302	Fubp1	100	98.658	Nannospalax_galili
ENSMAUG00000016428	Fubp1	98	70.946	ENSNBRG00000015099	fubp1	72	78.194	Neolamprologus_brichardi
ENSMAUG00000016428	Fubp1	98	99.315	ENSNLEG00000009772	FUBP1	100	94.848	Nomascus_leucogenys
ENSMAUG00000016428	Fubp1	90	97.674	ENSMEUG00000007917	-	79	97.674	Notamacropus_eugenii
ENSMAUG00000016428	Fubp1	90	98.630	ENSOPRG00000001175	FUBP1	91	98.630	Ochotona_princeps
ENSMAUG00000016428	Fubp1	98	68.493	ENSODEG00000003657	-	99	65.736	Octodon_degus
ENSMAUG00000016428	Fubp1	100	98.328	ENSODEG00000002600	-	100	99.315	Octodon_degus
ENSMAUG00000016428	Fubp1	98	70.946	ENSONIG00000018381	fubp1	69	78.603	Oreochromis_niloticus
ENSMAUG00000016428	Fubp1	98	98.630	ENSOANG00000009777	FUBP1	99	91.776	Ornithorhynchus_anatinus
ENSMAUG00000016428	Fubp1	98	69.505	ENSORLG00000003540	fubp1	71	77.974	Oryzias_latipes
ENSMAUG00000016428	Fubp1	98	68.824	ENSORLG00020005908	fubp1	70	77.313	Oryzias_latipes_hni
ENSMAUG00000016428	Fubp1	98	70.743	ENSORLG00015008779	fubp1	70	77.313	Oryzias_latipes_hsok
ENSMAUG00000016428	Fubp1	98	69.085	ENSOMEG00000021943	fubp1	70	76.211	Oryzias_melastigma
ENSMAUG00000016428	Fubp1	98	99.315	ENSOGAG00000014233	FUBP1	99	95.231	Otolemur_garnettii
ENSMAUG00000016428	Fubp1	100	97.987	ENSOARG00000013259	FUBP1	99	95.495	Ovis_aries
ENSMAUG00000016428	Fubp1	100	98.936	ENSPPRG00000000413	FUBP1	100	98.936	Panthera_pardus
ENSMAUG00000016428	Fubp1	100	98.936	ENSPTIG00000019450	FUBP1	100	98.936	Panthera_tigris_altaica
ENSMAUG00000016428	Fubp1	98	96.599	ENSPSIG00000012965	FUBP1	99	95.966	Pelodiscus_sinensis
ENSMAUG00000016428	Fubp1	98	71.429	ENSPMGG00000009060	fubp1	71	76.957	Periophthalmus_magnuspinnatus
ENSMAUG00000016428	Fubp1	100	98.024	ENSPEMG00000021802	Fubp1	100	98.630	Peromyscus_maniculatus_bairdii
ENSMAUG00000016428	Fubp1	56	62.821	ENSPMAG00000001644	-	90	63.964	Petromyzon_marinus
ENSMAUG00000016428	Fubp1	98	70.946	ENSPFOG00000000238	fubp1	75	53.659	Poecilia_formosa
ENSMAUG00000016428	Fubp1	98	70.946	ENSPLAG00000021170	fubp1	72	78.603	Poecilia_latipinna
ENSMAUG00000016428	Fubp1	98	72.685	ENSPMEG00000004747	fubp1	73	78.603	Poecilia_mexicana
ENSMAUG00000016428	Fubp1	97	75.139	ENSPREG00000017911	fubp1	70	78.603	Poecilia_reticulata
ENSMAUG00000016428	Fubp1	75	99.134	ENSPPYG00000001219	-	70	99.134	Pongo_abelii
ENSMAUG00000016428	Fubp1	100	98.176	ENSPCAG00000012617	FUBP1	100	98.176	Procavia_capensis
ENSMAUG00000016428	Fubp1	100	98.936	ENSPCOG00000024974	FUBP1	100	98.936	Propithecus_coquereli
ENSMAUG00000016428	Fubp1	100	94.529	ENSPVAG00000014637	FUBP1	100	94.529	Pteropus_vampyrus
ENSMAUG00000016428	Fubp1	98	71.494	ENSPNYG00000004552	fubp1	73	78.634	Pundamilia_nyererei
ENSMAUG00000016428	Fubp1	98	80.272	ENSPNAG00000016207	fubp1	87	77.440	Pygocentrus_nattereri
ENSMAUG00000016428	Fubp1	98	99.315	ENSRNOG00000043370	Fubp1	99	98.297	Rattus_norvegicus
ENSMAUG00000016428	Fubp1	98	99.315	ENSRBIG00000042950	FUBP1	99	98.762	Rhinopithecus_bieti
ENSMAUG00000016428	Fubp1	98	99.315	ENSRROG00000043534	FUBP1	99	98.762	Rhinopithecus_roxellana
ENSMAUG00000016428	Fubp1	100	98.632	ENSSBOG00000027299	FUBP1	100	98.632	Saimiri_boliviensis_boliviensis
ENSMAUG00000016428	Fubp1	100	97.315	ENSSHAG00000005367	FUBP1	99	98.370	Sarcophilus_harrisii
ENSMAUG00000016428	Fubp1	98	78.231	ENSSFOG00015010213	fubp1	70	79.386	Scleropages_formosus
ENSMAUG00000016428	Fubp1	98	70.946	ENSSDUG00000007383	fubp1	68	76.546	Seriola_dumerili
ENSMAUG00000016428	Fubp1	98	70.946	ENSSLDG00000022863	fubp1	72	76.754	Seriola_lalandi_dorsalis
ENSMAUG00000016428	Fubp1	100	96.774	ENSSARG00000011730	FUBP1	57	100.000	Sorex_araneus
ENSMAUG00000016428	Fubp1	98	87.556	ENSSPUG00000008389	FUBP1	99	85.423	Sphenodon_punctatus
ENSMAUG00000016428	Fubp1	98	72.419	ENSSPAG00000010161	fubp1	69	77.974	Stegastes_partitus
ENSMAUG00000016428	Fubp1	98	92.810	ENSTGUG00000006841	FUBP1	100	95.588	Taeniopygia_guttata
ENSMAUG00000016428	Fubp1	98	70.548	ENSTRUG00000004615	fubp1	65	77.948	Takifugu_rubripes
ENSMAUG00000016428	Fubp1	51	84.459	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSMAUG00000016428	Fubp1	82	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSMAUG00000016428	Fubp1	100	98.784	ENSTTRG00000000096	FUBP1	100	98.784	Tursiops_truncatus
ENSMAUG00000016428	Fubp1	100	97.987	ENSVPAG00000004709	FUBP1	100	98.775	Vicugna_pacos
ENSMAUG00000016428	Fubp1	98	68.606	ENSXCOG00000019354	fubp1	72	76.856	Xiphophorus_couchianus
ENSMAUG00000016428	Fubp1	97	75.235	ENSXMAG00000007168	fubp1	73	78.384	Xiphophorus_maculatus