EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAUG00000016436 (Gene tree)
Gene ID
101842160
Gene Symbol
Rbms3
Alias
-
Full Name
RNA binding motif single stranded interacting protein 3
Gene Type
protein_coding
Species
Mesocricetus_auratus
Status
putative
Strand
Minus strand
Length
777884 bases
Position
chrKB708177.1:11638835-12416718
Accession
101842160
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAUP00000017675RRM_1PF00076.226.9e-3212
ENSMAUP00000017675RRM_1PF00076.226.9e-3222
ENSMAUP00000017706RRM_1PF00076.227.6e-3212
ENSMAUP00000017706RRM_1PF00076.227.6e-3222
ENSMAUP00000017704RRM_1PF00076.228.5e-3212
ENSMAUP00000017704RRM_1PF00076.228.5e-3222
ENSMAUP00000017702RRM_1PF00076.229.1e-3212
ENSMAUP00000017702RRM_1PF00076.229.1e-3222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAUT00000021660-1248XM_005075046ENSMAUP00000017706415 (aa)XP_005075103UPI00035A022C
ENSMAUT00000021656-1341XM_013116931ENSMAUP00000017702446 (aa)XP_012972385-
ENSMAUT00000021637-558-ENSMAUP00000017683185 (aa)--
ENSMAUT00000021629-1209XM_005075051ENSMAUP00000017675402 (aa)XP_005075108A0A1U7QB00
ENSMAUT00000021658-1296XM_005075041ENSMAUP00000017704431 (aa)XP_005075098A0A1U7QJ84
Gene Model
Click here to download ENSMAUG00000016436's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000016436's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAUG00000016436Rbms36855.634ENSMAUG00000016984Rbms210055.634
ENSMAUG00000016436Rbms35335.714ENSMAUG00000011955Elavl27037.766
ENSMAUG00000016436Rbms37139.474ENSMAUG00000007850Celf39239.474
ENSMAUG00000016436Rbms35142.105ENSMAUG00000012641Celf65242.105
ENSMAUG00000016436Rbms39972.170ENSMAUG00000008550Rbms110069.740
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAUG00000016436Rbms310094.774ENSG00000144642RBMS310096.970Homo_sapiens
ENSMAUG00000016436Rbms39986.506ENSAPOG00000003432-9986.506Acanthochromis_polyacanthus
ENSMAUG00000016436Rbms39975.426ENSAPOG00000007266rbms39379.740Acanthochromis_polyacanthus
ENSMAUG00000016436Rbms37095.050ENSAMEG00000005947RBMS310095.050Ailuropoda_melanoleuca
ENSMAUG00000016436Rbms38872.629ENSACIG00000021113RBMS39671.545Amphilophus_citrinellus
ENSMAUG00000016436Rbms38184.969ENSACIG00000006987-8190.541Amphilophus_citrinellus
ENSMAUG00000016436Rbms39585.965ENSAOCG00000024104-9981.236Amphiprion_ocellaris
ENSMAUG00000016436Rbms39978.089ENSAOCG00000021274rbms310076.923Amphiprion_ocellaris
ENSMAUG00000016436Rbms39981.752ENSAPEG00000009481-9981.752Amphiprion_percula
ENSMAUG00000016436Rbms39075.132ENSAPEG00000016299rbms38683.742Amphiprion_percula
ENSMAUG00000016436Rbms39978.689ENSATEG00000024295rbms310077.752Anabas_testudineus
ENSMAUG00000016436Rbms39986.265ENSATEG00000008433-9986.265Anabas_testudineus
ENSMAUG00000016436Rbms39988.631ENSAPLG00000012270RBMS310087.935Anas_platyrhynchos
ENSMAUG00000016436Rbms39990.931ENSACAG00000028664RBMS39989.737Anolis_carolinensis
ENSMAUG00000016436Rbms310094.737ENSANAG00000021899RBMS310092.906Aotus_nancymaae
ENSMAUG00000016436Rbms39586.216ENSACLG00000008976-9481.507Astatotilapia_calliptera
ENSMAUG00000016436Rbms39978.169ENSACLG00000018506rbms310077.230Astatotilapia_calliptera
ENSMAUG00000016436Rbms36483.012ENSAMXG00000043770-10083.012Astyanax_mexicanus
ENSMAUG00000016436Rbms39985.167ENSAMXG00000020388rbms310085.167Astyanax_mexicanus
ENSMAUG00000016436Rbms39993.810ENSBTAG00000044062RBMS310092.143Bos_taurus
ENSMAUG00000016436Rbms310094.737ENSCJAG00000004312RBMS310092.677Callithrix_jacchus
ENSMAUG00000016436Rbms310094.737ENSCAFG00000005464RBMS310092.906Canis_familiaris
ENSMAUG00000016436Rbms39994.725ENSCAFG00020024980RBMS310092.890Canis_lupus_dingo
ENSMAUG00000016436Rbms310093.824ENSCHIG00000009144RBMS310092.162Capra_hircus
ENSMAUG00000016436Rbms37795.509ENSTSYG00000002615RBMS310096.215Carlito_syrichta
ENSMAUG00000016436Rbms39989.213ENSCAPG00000017783RBMS310089.213Cavia_aperea
ENSMAUG00000016436Rbms310095.673ENSCPOG00000006457RBMS310095.673Cavia_porcellus
ENSMAUG00000016436Rbms310094.737ENSCCAG00000008671RBMS310092.677Cebus_capucinus
ENSMAUG00000016436Rbms310094.966ENSCATG00000013222RBMS310094.966Cercocebus_atys
ENSMAUG00000016436Rbms310095.012ENSCLAG00000005866RBMS310095.012Chinchilla_lanigera
ENSMAUG00000016436Rbms36594.834ENSCSAG00000009655RBMS310094.834Chlorocebus_sabaeus
ENSMAUG00000016436Rbms38896.045ENSCHOG00000000758RBMS38796.045Choloepus_hoffmanni
ENSMAUG00000016436Rbms39991.408ENSCPBG00000022678RBMS39891.223Chrysemys_picta_bellii
ENSMAUG00000016436Rbms310095.195ENSCANG00000032137RBMS310095.195Colobus_angolensis_palliatus
ENSMAUG00000016436Rbms3100100.000ENSCGRG00001007243Rbms3100100.000Cricetulus_griseus_chok1gshd
ENSMAUG00000016436Rbms3100100.000ENSCGRG00000004599Rbms3100100.000Cricetulus_griseus_crigri
ENSMAUG00000016436Rbms39977.804ENSCSEG00000010011RBMS310077.570Cynoglossus_semilaevis
ENSMAUG00000016436Rbms39985.646ENSCSEG00000014677-9591.393Cynoglossus_semilaevis
ENSMAUG00000016436Rbms39978.723ENSCVAG00000022354rbms310077.541Cyprinodon_variegatus
ENSMAUG00000016436Rbms39985.577ENSCVAG00000022814-9985.817Cyprinodon_variegatus
ENSMAUG00000016436Rbms39986.538ENSDARG00000044574rbms39097.674Danio_rerio
ENSMAUG00000016436Rbms310095.423ENSDNOG00000016645RBMS310095.423Dasypus_novemcinctus
ENSMAUG00000016436Rbms310094.062ENSDORG00000007220Rbms310092.637Dipodomys_ordii
ENSMAUG00000016436Rbms38787.500ENSETEG00000009485-8687.500Echinops_telfairi
ENSMAUG00000016436Rbms37054.804ENSEBUG00000005830rbms38357.198Eptatretus_burgeri
ENSMAUG00000016436Rbms310094.299ENSEASG00005006152RBMS310092.637Equus_asinus_asinus
ENSMAUG00000016436Rbms310094.299ENSECAG00000017871RBMS310092.637Equus_caballus
ENSMAUG00000016436Rbms39687.532ENSEEUG00000014337RBMS310085.242Erinaceus_europaeus
ENSMAUG00000016436Rbms39978.169ENSELUG00000002862rbms310077.700Esox_lucius
ENSMAUG00000016436Rbms39982.426ENSELUG00000006905-9891.803Esox_lucius
ENSMAUG00000016436Rbms310094.299ENSFCAG00000002130RBMS310092.874Felis_catus
ENSMAUG00000016436Rbms39991.647ENSFALG00000009165RBMS39990.453Ficedula_albicollis
ENSMAUG00000016436Rbms310094.469ENSFDAG00000008278RBMS310092.874Fukomys_damarensis
ENSMAUG00000016436Rbms39667.407ENSFHEG00000004787RBMS39570.461Fundulus_heteroclitus
ENSMAUG00000016436Rbms39079.597ENSGMOG00000002600-9380.670Gadus_morhua
ENSMAUG00000016436Rbms39991.647ENSGALG00000011439RBMS39990.453Gallus_gallus
ENSMAUG00000016436Rbms39978.774ENSGAFG00000000168rbms310075.708Gambusia_affinis
ENSMAUG00000016436Rbms39986.298ENSGAFG00000003329-9986.298Gambusia_affinis
ENSMAUG00000016436Rbms36590.406ENSGAGG00000004039RBMS310090.406Gopherus_agassizii
ENSMAUG00000016436Rbms310094.737ENSGGOG00000007228RBMS310092.677Gorilla_gorilla
ENSMAUG00000016436Rbms36583.704ENSHBUG00000021196rbms39483.704Haplochromis_burtoni
ENSMAUG00000016436Rbms310084.211ENSHBUG00000019785-9684.211Haplochromis_burtoni
ENSMAUG00000016436Rbms310094.537ENSHGLG00000002170RBMS310093.112Heterocephalus_glaber_female
ENSMAUG00000016436Rbms310094.537ENSHGLG00100014278RBMS310093.112Heterocephalus_glaber_male
ENSMAUG00000016436Rbms39985.817ENSHCOG00000007894-9985.817Hippocampus_comes
ENSMAUG00000016436Rbms39985.167ENSIPUG00000017680rbms310085.167Ictalurus_punctatus
ENSMAUG00000016436Rbms310095.575ENSSTOG00000006324RBMS310095.012Ictidomys_tridecemlineatus
ENSMAUG00000016436Rbms310092.018ENSJJAG00000014708Rbms310091.055Jaculus_jaculus
ENSMAUG00000016436Rbms39977.442ENSKMAG00000020500rbms310077.442Kryptolebias_marmoratus
ENSMAUG00000016436Rbms39986.265ENSKMAG00000012586-9986.265Kryptolebias_marmoratus
ENSMAUG00000016436Rbms36567.500ENSLBEG00000006677rbms39672.201Labrus_bergylta
ENSMAUG00000016436Rbms39985.749ENSLBEG00000027388-9985.749Labrus_bergylta
ENSMAUG00000016436Rbms39991.148ENSLACG00000010581RBMS310089.234Latimeria_chalumnae
ENSMAUG00000016436Rbms37086.348ENSLOCG00000002328rbms310086.348Lepisosteus_oculatus
ENSMAUG00000016436Rbms39994.495ENSLAFG00000000354RBMS310092.661Loxodonta_africana
ENSMAUG00000016436Rbms310095.249ENSMFAG00000033300RBMS310095.249Macaca_fascicularis
ENSMAUG00000016436Rbms310095.249ENSMMUG00000004404RBMS310095.249Macaca_mulatta
ENSMAUG00000016436Rbms310095.195ENSMNEG00000035839RBMS310095.285Macaca_nemestrina
ENSMAUG00000016436Rbms310094.966ENSMLEG00000029464RBMS310094.966Mandrillus_leucophaeus
ENSMAUG00000016436Rbms39684.910ENSMAMG00000002176-8388.533Mastacembelus_armatus
ENSMAUG00000016436Rbms39978.972ENSMAMG00000024043rbms310078.037Mastacembelus_armatus
ENSMAUG00000016436Rbms39978.169ENSMZEG00005006308rbms310077.230Maylandia_zebra
ENSMAUG00000016436Rbms310084.259ENSMZEG00005026469-9684.368Maylandia_zebra
ENSMAUG00000016436Rbms310094.508ENSMICG00000049249RBMS310092.906Microcebus_murinus
ENSMAUG00000016436Rbms310098.840ENSMOCG00000006997Rbms310098.840Microtus_ochrogaster
ENSMAUG00000016436Rbms38877.686ENSMMOG00000008471RBMS38884.663Mola_mola
ENSMAUG00000016436Rbms39986.375ENSMMOG00000015071-9986.375Mola_mola
ENSMAUG00000016436Rbms39983.857ENSMODG00000015125RBMS39983.408Monodelphis_domestica
ENSMAUG00000016436Rbms39986.265ENSMALG00000009155-9986.265Monopterus_albus
ENSMAUG00000016436Rbms39978.505ENSMALG00000019536RBMS310077.570Monopterus_albus
ENSMAUG00000016436Rbms310098.144MGP_CAROLIEiJ_G0032783Rbms310098.341Mus_caroli
ENSMAUG00000016436Rbms310098.840ENSMUSG00000039607Rbms310099.517Mus_musculus
ENSMAUG00000016436Rbms310098.611MGP_PahariEiJ_G0015650Rbms310099.517Mus_pahari
ENSMAUG00000016436Rbms310098.840MGP_SPRETEiJ_G0033930Rbms310099.517Mus_spretus
ENSMAUG00000016436Rbms39994.495ENSMPUG00000011956RBMS310092.661Mustela_putorius_furo
ENSMAUG00000016436Rbms39994.524ENSMLUG00000000659RBMS310093.095Myotis_lucifugus
ENSMAUG00000016436Rbms310097.460ENSNGAG00000014039Rbms310097.460Nannospalax_galili
ENSMAUG00000016436Rbms39986.506ENSNBRG00000018065-9986.506Neolamprologus_brichardi
ENSMAUG00000016436Rbms310094.737ENSNLEG00000004129RBMS310092.677Nomascus_leucogenys
ENSMAUG00000016436Rbms39981.422ENSMEUG00000004772RBMS310079.128Notamacropus_eugenii
ENSMAUG00000016436Rbms39994.483ENSOPRG00000006808RBMS38592.414Ochotona_princeps
ENSMAUG00000016436Rbms310095.012ENSODEG00000003651RBMS310095.012Octodon_degus
ENSMAUG00000016436Rbms39973.585ENSONIG00000007172rbms310070.991Oreochromis_niloticus
ENSMAUG00000016436Rbms39989.220ENSOANG00000010529RBMS39987.156Ornithorhynchus_anatinus
ENSMAUG00000016436Rbms310093.822ENSOCUG00000004840RBMS310091.533Oryctolagus_cuniculus
ENSMAUG00000016436Rbms39986.747ENSORLG00000002306-9986.747Oryzias_latipes
ENSMAUG00000016436Rbms39978.723ENSORLG00000005370RBMS310075.414Oryzias_latipes
ENSMAUG00000016436Rbms39986.506ENSORLG00020008496-9986.506Oryzias_latipes_hni
ENSMAUG00000016436Rbms39978.251ENSORLG00020022674RBMS310074.941Oryzias_latipes_hni
ENSMAUG00000016436Rbms39978.960ENSORLG00015005509rbms310075.414Oryzias_latipes_hsok
ENSMAUG00000016436Rbms39986.506ENSORLG00015015719-9986.506Oryzias_latipes_hsok
ENSMAUG00000016436Rbms39979.433ENSOMEG00000014805RBMS310075.887Oryzias_melastigma
ENSMAUG00000016436Rbms39186.877ENSOMEG00000007677-9687.432Oryzias_melastigma
ENSMAUG00000016436Rbms310094.279ENSOARG00000014684RBMS310092.220Ovis_aries
ENSMAUG00000016436Rbms310094.737ENSPPAG00000036519RBMS310092.677Pan_paniscus
ENSMAUG00000016436Rbms310094.050ENSPPRG00000002761RBMS310092.677Panthera_pardus
ENSMAUG00000016436Rbms310094.050ENSPTIG00000011568RBMS310092.677Panthera_tigris_altaica
ENSMAUG00000016436Rbms310094.774ENSPTRG00000014709RBMS310093.112Pan_troglodytes
ENSMAUG00000016436Rbms310094.966ENSPANG00000010234RBMS310090.300Papio_anubis
ENSMAUG00000016436Rbms35292.857ENSPKIG00000016025-7492.857Paramormyrops_kingsleyae
ENSMAUG00000016436Rbms36488.417ENSPKIG00000007989-10088.417Paramormyrops_kingsleyae
ENSMAUG00000016436Rbms39990.931ENSPSIG00000005269RBMS39989.737Pelodiscus_sinensis
ENSMAUG00000016436Rbms38876.164ENSPMGG00000021544rbms38582.822Periophthalmus_magnuspinnatus
ENSMAUG00000016436Rbms39187.402ENSPMGG00000021683-9687.978Periophthalmus_magnuspinnatus
ENSMAUG00000016436Rbms39996.270ENSPEMG00000001117Rbms310096.270Peromyscus_maniculatus_bairdii
ENSMAUG00000016436Rbms38791.525ENSPCIG00000006106RBMS39088.889Phascolarctos_cinereus
ENSMAUG00000016436Rbms39978.538ENSPFOG00000017887rbms310075.472Poecilia_formosa
ENSMAUG00000016436Rbms37779.439ENSPLAG00000016866-8378.193Poecilia_latipinna
ENSMAUG00000016436Rbms39986.538ENSPMEG00000002993-9986.538Poecilia_mexicana
ENSMAUG00000016436Rbms38986.667ENSPREG00000018221-9888.281Poecilia_reticulata
ENSMAUG00000016436Rbms39977.381ENSPREG00000011880rbms39976.190Poecilia_reticulata
ENSMAUG00000016436Rbms310081.236ENSPPYG00000014050RBMS38379.176Pongo_abelii
ENSMAUG00000016436Rbms310070.938ENSPCAG00000006307RBMS310069.565Procavia_capensis
ENSMAUG00000016436Rbms39994.483ENSPCOG00000017136RBMS310092.414Propithecus_coquereli
ENSMAUG00000016436Rbms310083.982ENSPVAG00000014037RBMS310083.982Pteropus_vampyrus
ENSMAUG00000016436Rbms39978.169ENSPNYG00000010546rbms310077.230Pundamilia_nyererei
ENSMAUG00000016436Rbms39986.747ENSPNYG00000012624-9986.747Pundamilia_nyererei
ENSMAUG00000016436Rbms39984.928ENSPNAG00000001800rbms310084.928Pygocentrus_nattereri
ENSMAUG00000016436Rbms39998.837ENSRNOG00000025881Rbms310098.837Rattus_norvegicus
ENSMAUG00000016436Rbms310095.195ENSRBIG00000035863RBMS310095.195Rhinopithecus_bieti
ENSMAUG00000016436Rbms39495.388ENSRROG00000027512RBMS310095.939Rhinopithecus_roxellana
ENSMAUG00000016436Rbms310094.737ENSSBOG00000020232RBMS310092.677Saimiri_boliviensis_boliviensis
ENSMAUG00000016436Rbms38886.301ENSSHAG00000002411RBMS39486.301Sarcophilus_harrisii
ENSMAUG00000016436Rbms39985.472ENSSFOG00015008578rbms39984.988Scleropages_formosus
ENSMAUG00000016436Rbms39974.592ENSSMAG00000004997rbms39978.049Scophthalmus_maximus
ENSMAUG00000016436Rbms39684.655ENSSMAG00000020065-9388.267Scophthalmus_maximus
ENSMAUG00000016436Rbms39978.505ENSSDUG00000013656RBMS310077.570Seriola_dumerili
ENSMAUG00000016436Rbms39986.506ENSSDUG00000019287-9986.506Seriola_dumerili
ENSMAUG00000016436Rbms39978.190ENSSLDG00000020276RBMS310077.262Seriola_lalandi_dorsalis
ENSMAUG00000016436Rbms39986.506ENSSLDG00000013224-9986.506Seriola_lalandi_dorsalis
ENSMAUG00000016436Rbms39083.152ENSSARG00000000695RBMS310083.152Sorex_araneus
ENSMAUG00000016436Rbms36989.384ENSSPUG00000017197RBMS39888.215Sphenodon_punctatus
ENSMAUG00000016436Rbms39585.965ENSSPAG00000003983-9980.645Stegastes_partitus
ENSMAUG00000016436Rbms39977.622ENSSPAG00000020693rbms310076.923Stegastes_partitus
ENSMAUG00000016436Rbms310094.299ENSSSCG00000036381RBMS310092.637Sus_scrofa
ENSMAUG00000016436Rbms37788.922ENSTGUG00000003572RBMS310088.922Taeniopygia_guttata
ENSMAUG00000016436Rbms39978.037ENSTRUG00000021719RBMS310077.336Takifugu_rubripes
ENSMAUG00000016436Rbms39977.143ENSTRUG00000007482-9976.794Takifugu_rubripes
ENSMAUG00000016436Rbms38492.330ENSTBEG00000005362RBMS310091.576Tupaia_belangeri
ENSMAUG00000016436Rbms39994.023ENSTTRG00000006202RBMS310091.954Tursiops_truncatus
ENSMAUG00000016436Rbms310094.737ENSUMAG00000000263RBMS310092.906Ursus_maritimus
ENSMAUG00000016436Rbms38984.334ENSVPAG00000003842RBMS39383.029Vicugna_pacos
ENSMAUG00000016436Rbms38896.073ENSVVUG00000004660RBMS39997.391Vulpes_vulpes
ENSMAUG00000016436Rbms37184.691ENSXETG00000032055RBMS39984.691Xenopus_tropicalis
ENSMAUG00000016436Rbms39172.165ENSXCOG00000019600-9572.118Xiphophorus_couchianus
ENSMAUG00000016436Rbms39986.298ENSXMAG00000014382-9986.298Xiphophorus_maculatus
ENSMAUG00000016436Rbms39977.176ENSXMAG00000021783rbms310076.000Xiphophorus_maculatus

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