EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000016467 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein Sm D1-like
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 336 bases
Position: chrAPMT01207135.1:28792-29127
Accession: 101831029
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000017648	LSM	PF01423.22	5.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000021601	-	336	XM_013126605	ENSMAUP00000017648	111 (aa)	XP_012982059	UPI00035A0DC0

Gene Model

Click here to download ENSMAUG00000016467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000016467's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000016467	-	87	80.412	ENSMAUG00000006829	-	59	84.444
ENSMAUG00000016467	-	100	100.000	ENSMAUG00000016502	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000016467	-	86	83.333	ENSG00000167088	SNRPD1	81	83.333	Homo_sapiens
ENSMAUG00000016467	-	86	79.167	ENSAPOG00000019446	snrpd1	52	79.167	Acanthochromis_polyacanthus
ENSMAUG00000016467	-	85	81.915	ENSAMEG00000002576	SNRPD1	80	81.915	Ailuropoda_melanoleuca
ENSMAUG00000016467	-	78	81.609	ENSACIG00000011263	snrpd1	78	81.609	Amphilophus_citrinellus
ENSMAUG00000016467	-	86	79.167	ENSAOCG00000007406	snrpd1	81	79.167	Amphiprion_ocellaris
ENSMAUG00000016467	-	86	75.000	ENSAPEG00000014961	snrpd1	80	75.000	Amphiprion_percula
ENSMAUG00000016467	-	78	81.609	ENSAPEG00000012539	SNRPD1	78	81.609	Amphiprion_percula
ENSMAUG00000016467	-	86	79.167	ENSATEG00000014399	snrpd1	81	79.167	Anabas_testudineus
ENSMAUG00000016467	-	83	83.696	ENSAPLG00000012256	SNRPD1	77	83.696	Anas_platyrhynchos
ENSMAUG00000016467	-	86	83.333	ENSACAG00000006364	SNRPD1	81	83.333	Anolis_carolinensis
ENSMAUG00000016467	-	86	83.333	ENSANAG00000025641	SNRPD1	81	83.333	Aotus_nancymaae
ENSMAUG00000016467	-	78	81.609	ENSACLG00000017406	snrpd1	78	81.609	Astatotilapia_calliptera
ENSMAUG00000016467	-	86	80.208	ENSAMXG00000004589	snrpd1	81	80.208	Astyanax_mexicanus
ENSMAUG00000016467	-	85	79.787	ENSBTAG00000055316	-	81	79.787	Bos_taurus
ENSMAUG00000016467	-	86	83.333	ENSBTAG00000008292	SNRPD1	81	83.333	Bos_taurus
ENSMAUG00000016467	-	86	80.208	ENSBTAG00000047266	-	81	80.208	Bos_taurus
ENSMAUG00000016467	-	86	83.333	ENSBTAG00000012376	-	72	83.333	Bos_taurus
ENSMAUG00000016467	-	79	64.773	WBGene00004916	snr-3	76	61.458	Caenorhabditis_elegans
ENSMAUG00000016467	-	86	83.333	ENSCJAG00000042955	SNRPD1	81	83.333	Callithrix_jacchus
ENSMAUG00000016467	-	86	83.333	ENSCAFG00000018247	SNRPD1	81	83.333	Canis_familiaris
ENSMAUG00000016467	-	86	83.158	ENSCAFG00020015914	SNRPD1	74	83.158	Canis_lupus_dingo
ENSMAUG00000016467	-	86	81.250	ENSCHIG00000005557	SNRPD1	79	82.979	Capra_hircus
ENSMAUG00000016467	-	86	83.333	ENSTSYG00000030028	SNRPD1	81	83.333	Carlito_syrichta
ENSMAUG00000016467	-	83	82.609	ENSCAPG00000008103	SNRPD1	79	82.609	Cavia_aperea
ENSMAUG00000016467	-	86	83.333	ENSCPOG00000004679	SNRPD1	81	83.333	Cavia_porcellus
ENSMAUG00000016467	-	86	83.333	ENSCCAG00000032658	SNRPD1	81	83.333	Cebus_capucinus
ENSMAUG00000016467	-	86	83.333	ENSCCAG00000020611	-	81	83.333	Cebus_capucinus
ENSMAUG00000016467	-	86	82.292	ENSCCAG00000005390	-	81	82.292	Cebus_capucinus
ENSMAUG00000016467	-	86	79.167	ENSCCAG00000016652	-	81	79.167	Cebus_capucinus
ENSMAUG00000016467	-	86	83.333	ENSCATG00000039978	SNRPD1	81	83.333	Cercocebus_atys
ENSMAUG00000016467	-	86	83.333	ENSCLAG00000008691	SNRPD1	81	83.333	Chinchilla_lanigera
ENSMAUG00000016467	-	86	83.333	ENSCSAG00000017654	SNRPD1	81	83.333	Chlorocebus_sabaeus
ENSMAUG00000016467	-	86	83.333	ENSCPBG00000023143	SNRPD1	81	83.333	Chrysemys_picta_bellii
ENSMAUG00000016467	-	77	72.093	ENSCING00000024100	-	76	67.368	Ciona_intestinalis
ENSMAUG00000016467	-	78	70.115	ENSCSAVG00000004578	-	70	70.115	Ciona_savignyi
ENSMAUG00000016467	-	86	83.333	ENSCGRG00001021055	-	81	83.333	Cricetulus_griseus_chok1gshd
ENSMAUG00000016467	-	86	63.542	ENSCGRG00001009945	-	85	63.542	Cricetulus_griseus_chok1gshd
ENSMAUG00000016467	-	86	83.333	ENSCGRG00000000490	-	81	83.333	Cricetulus_griseus_crigri
ENSMAUG00000016467	-	86	63.542	ENSCGRG00000006224	-	85	63.542	Cricetulus_griseus_crigri
ENSMAUG00000016467	-	86	77.895	ENSCSEG00000018141	snrpd1	81	78.125	Cynoglossus_semilaevis
ENSMAUG00000016467	-	86	79.167	ENSCVAG00000000534	snrpd1	81	79.167	Cyprinodon_variegatus
ENSMAUG00000016467	-	86	80.208	ENSDARG00000011648	snrpd1	95	81.111	Danio_rerio
ENSMAUG00000016467	-	86	83.333	ENSDNOG00000040310	SNRPD1	81	83.333	Dasypus_novemcinctus
ENSMAUG00000016467	-	86	83.333	ENSDORG00000008349	Snrpd1	81	83.333	Dipodomys_ordii
ENSMAUG00000016467	-	85	68.085	FBgn0261933	SmD1	76	68.085	Drosophila_melanogaster
ENSMAUG00000016467	-	59	87.692	ENSETEG00000011689	SNRPD1	55	87.692	Echinops_telfairi
ENSMAUG00000016467	-	91	73.267	ENSEBUG00000003170	snrpd1	93	76.596	Eptatretus_burgeri
ENSMAUG00000016467	-	78	86.207	ENSEASG00005002433	SNRPD1	78	86.207	Equus_asinus_asinus
ENSMAUG00000016467	-	78	86.207	ENSECAG00000014373	SNRPD1	78	86.207	Equus_caballus
ENSMAUG00000016467	-	80	84.270	ENSEEUG00000004987	SNRPD1	100	84.270	Erinaceus_europaeus
ENSMAUG00000016467	-	89	77.778	ENSELUG00000000088	snrpd1	79	79.787	Esox_lucius
ENSMAUG00000016467	-	86	83.333	ENSFCAG00000012352	SNRPD1	81	83.333	Felis_catus
ENSMAUG00000016467	-	78	86.207	ENSFALG00000002646	SNRPD1	78	86.207	Ficedula_albicollis
ENSMAUG00000016467	-	86	80.208	ENSGMOG00000015607	snrpd1	81	80.208	Gadus_morhua
ENSMAUG00000016467	-	86	83.333	ENSGALG00000041334	SNRPD1	81	83.333	Gallus_gallus
ENSMAUG00000016467	-	86	79.167	ENSGAFG00000011171	snrpd1	81	79.167	Gambusia_affinis
ENSMAUG00000016467	-	86	80.208	ENSGACG00000005201	SNRPD1	81	80.208	Gasterosteus_aculeatus
ENSMAUG00000016467	-	86	83.333	ENSGAGG00000011197	SNRPD1	81	83.333	Gopherus_agassizii
ENSMAUG00000016467	-	86	80.208	ENSGGOG00000026706	-	80	80.208	Gorilla_gorilla
ENSMAUG00000016467	-	86	83.333	ENSGGOG00000041053	SNRPD1	81	83.333	Gorilla_gorilla
ENSMAUG00000016467	-	86	79.167	ENSHBUG00000003236	snrpd1	81	79.167	Haplochromis_burtoni
ENSMAUG00000016467	-	86	83.333	ENSHGLG00000007152	SNRPD1	81	83.333	Heterocephalus_glaber_female
ENSMAUG00000016467	-	86	83.333	ENSHGLG00100008618	SNRPD1	81	83.333	Heterocephalus_glaber_male
ENSMAUG00000016467	-	86	79.167	ENSIPUG00000003576	snrpd1	81	79.167	Ictalurus_punctatus
ENSMAUG00000016467	-	86	83.333	ENSSTOG00000000485	SNRPD1	81	83.333	Ictidomys_tridecemlineatus
ENSMAUG00000016467	-	86	83.333	ENSJJAG00000017698	Snrpd1	81	83.333	Jaculus_jaculus
ENSMAUG00000016467	-	86	79.167	ENSKMAG00000005987	snrpd1	81	79.167	Kryptolebias_marmoratus
ENSMAUG00000016467	-	86	79.167	ENSLBEG00000003327	snrpd1	81	79.167	Labrus_bergylta
ENSMAUG00000016467	-	86	83.333	ENSLACG00000001955	SNRPD1	81	83.333	Latimeria_chalumnae
ENSMAUG00000016467	-	85	80.851	ENSLOCG00000002003	snrpd1	80	80.851	Lepisosteus_oculatus
ENSMAUG00000016467	-	86	82.105	ENSLAFG00000005819	SNRPD1	81	82.105	Loxodonta_africana
ENSMAUG00000016467	-	86	83.333	ENSMFAG00000042080	SNRPD1	81	83.333	Macaca_fascicularis
ENSMAUG00000016467	-	82	83.516	ENSMMUG00000003992	SNRPD1	78	83.516	Macaca_mulatta
ENSMAUG00000016467	-	86	83.333	ENSMNEG00000041296	SNRPD1	81	83.333	Macaca_nemestrina
ENSMAUG00000016467	-	86	83.333	ENSMLEG00000028659	SNRPD1	81	83.333	Mandrillus_leucophaeus
ENSMAUG00000016467	-	86	79.167	ENSMAMG00000012971	snrpd1	81	79.167	Mastacembelus_armatus
ENSMAUG00000016467	-	86	79.167	ENSMZEG00005004685	snrpd1	81	79.167	Maylandia_zebra
ENSMAUG00000016467	-	83	83.696	ENSMGAG00000011598	SNRPD1	76	83.696	Meleagris_gallopavo
ENSMAUG00000016467	-	86	83.333	ENSMICG00000044066	SNRPD1	81	83.333	Microcebus_murinus
ENSMAUG00000016467	-	86	83.333	ENSMOCG00000017367	Snrpd1	81	83.333	Microtus_ochrogaster
ENSMAUG00000016467	-	86	79.167	ENSMMOG00000019089	snrpd1	81	79.167	Mola_mola
ENSMAUG00000016467	-	86	83.333	ENSMODG00000021487	SNRPD1	81	83.333	Monodelphis_domestica
ENSMAUG00000016467	-	86	79.167	ENSMALG00000014459	snrpd1	81	79.167	Monopterus_albus
ENSMAUG00000016467	-	86	83.333	MGP_CAROLIEiJ_G0021994	Snrpd1	81	83.333	Mus_caroli
ENSMAUG00000016467	-	86	83.333	ENSMUSG00000002477	Snrpd1	81	83.333	Mus_musculus
ENSMAUG00000016467	-	86	83.333	MGP_PahariEiJ_G0018731	Snrpd1	81	83.333	Mus_pahari
ENSMAUG00000016467	-	86	83.333	MGP_SPRETEiJ_G0022910	Snrpd1	81	83.333	Mus_spretus
ENSMAUG00000016467	-	85	81.915	ENSMPUG00000005567	-	80	81.915	Mustela_putorius_furo
ENSMAUG00000016467	-	86	82.292	ENSMPUG00000020041	-	81	82.292	Mustela_putorius_furo
ENSMAUG00000016467	-	85	82.979	ENSMLUG00000009124	SNRPD1	73	82.979	Myotis_lucifugus
ENSMAUG00000016467	-	86	83.333	ENSNGAG00000023946	Snrpd1	81	83.333	Nannospalax_galili
ENSMAUG00000016467	-	85	79.787	ENSNBRG00000012119	snrpd1	78	79.787	Neolamprologus_brichardi
ENSMAUG00000016467	-	86	80.208	ENSNLEG00000031430	SNRPD1	80	80.208	Nomascus_leucogenys
ENSMAUG00000016467	-	86	83.333	ENSODEG00000005764	SNRPD1	81	83.333	Octodon_degus
ENSMAUG00000016467	-	86	79.167	ENSONIG00000002486	snrpd1	81	79.167	Oreochromis_niloticus
ENSMAUG00000016467	-	81	75.556	ENSOANG00000004638	-	76	75.556	Ornithorhynchus_anatinus
ENSMAUG00000016467	-	86	83.333	ENSOCUG00000014399	-	81	83.333	Oryctolagus_cuniculus
ENSMAUG00000016467	-	85	81.915	ENSOCUG00000023761	-	80	81.915	Oryctolagus_cuniculus
ENSMAUG00000016467	-	78	81.609	ENSORLG00000012516	snrpd1	78	81.609	Oryzias_latipes
ENSMAUG00000016467	-	86	79.167	ENSORLG00020005743	snrpd1	81	79.167	Oryzias_latipes_hni
ENSMAUG00000016467	-	86	79.167	ENSORLG00015013402	snrpd1	81	79.167	Oryzias_latipes_hsok
ENSMAUG00000016467	-	86	79.167	ENSOMEG00000011571	snrpd1	81	79.167	Oryzias_melastigma
ENSMAUG00000016467	-	85	81.915	ENSOGAG00000007833	SNRPD1	79	81.915	Otolemur_garnettii
ENSMAUG00000016467	-	86	83.333	ENSOARG00000003413	-	72	83.333	Ovis_aries
ENSMAUG00000016467	-	86	83.333	ENSPPAG00000042593	SNRPD1	81	83.333	Pan_paniscus
ENSMAUG00000016467	-	86	58.333	ENSPPRG00000005009	-	75	58.333	Panthera_pardus
ENSMAUG00000016467	-	86	83.333	ENSPPRG00000002399	SNRPD1	81	83.333	Panthera_pardus
ENSMAUG00000016467	-	82	83.516	ENSPTIG00000013206	SNRPD1	80	83.516	Panthera_tigris_altaica
ENSMAUG00000016467	-	87	83.505	ENSPTRG00000009909	SNRPD1	81	83.333	Pan_troglodytes
ENSMAUG00000016467	-	86	78.125	ENSPTRG00000050159	-	82	78.125	Pan_troglodytes
ENSMAUG00000016467	-	86	83.333	ENSPANG00000023478	SNRPD1	81	83.333	Papio_anubis
ENSMAUG00000016467	-	86	80.208	ENSPKIG00000003985	SNRPD1	81	80.208	Paramormyrops_kingsleyae
ENSMAUG00000016467	-	78	80.460	ENSPKIG00000021610	snrpd1	77	81.395	Paramormyrops_kingsleyae
ENSMAUG00000016467	-	86	79.167	ENSPMGG00000001862	snrpd1	81	79.167	Periophthalmus_magnuspinnatus
ENSMAUG00000016467	-	86	83.333	ENSPEMG00000014773	-	81	83.333	Peromyscus_maniculatus_bairdii
ENSMAUG00000016467	-	85	70.833	ENSPMAG00000003938	-	79	70.833	Petromyzon_marinus
ENSMAUG00000016467	-	86	83.333	ENSPCIG00000020320	SNRPD1	81	83.333	Phascolarctos_cinereus
ENSMAUG00000016467	-	86	79.167	ENSPFOG00000012448	SNRPD1	85	79.167	Poecilia_formosa
ENSMAUG00000016467	-	86	79.167	ENSPLAG00000006738	snrpd1	85	79.167	Poecilia_latipinna
ENSMAUG00000016467	-	86	79.167	ENSPMEG00000021942	snrpd1	85	79.167	Poecilia_mexicana
ENSMAUG00000016467	-	86	79.167	ENSPREG00000007094	snrpd1	81	79.167	Poecilia_reticulata
ENSMAUG00000016467	-	86	83.333	ENSPPYG00000025874	SNRPD1	81	83.333	Pongo_abelii
ENSMAUG00000016467	-	86	83.333	ENSPCOG00000013327	SNRPD1	81	83.333	Propithecus_coquereli
ENSMAUG00000016467	-	86	83.333	ENSPVAG00000005511	SNRPD1	64	83.333	Pteropus_vampyrus
ENSMAUG00000016467	-	86	79.167	ENSPNAG00000017824	snrpd1	81	79.167	Pygocentrus_nattereri
ENSMAUG00000016467	-	86	83.333	ENSRNOG00000013714	Snrpd1	81	83.333	Rattus_norvegicus
ENSMAUG00000016467	-	86	83.333	ENSRBIG00000022996	SNRPD1	81	83.333	Rhinopithecus_bieti
ENSMAUG00000016467	-	86	83.333	ENSRROG00000027640	SNRPD1	81	83.333	Rhinopithecus_roxellana
ENSMAUG00000016467	-	86	83.333	ENSSBOG00000020998	SNRPD1	81	83.333	Saimiri_boliviensis_boliviensis
ENSMAUG00000016467	-	86	83.333	ENSSHAG00000011791	SNRPD1	81	83.333	Sarcophilus_harrisii
ENSMAUG00000016467	-	86	78.125	ENSSFOG00015022253	-	81	78.125	Scleropages_formosus
ENSMAUG00000016467	-	86	78.125	ENSSFOG00015008809	-	81	78.125	Scleropages_formosus
ENSMAUG00000016467	-	86	78.125	ENSSMAG00000008765	snrpd1	81	78.125	Scophthalmus_maximus
ENSMAUG00000016467	-	83	78.261	ENSSDUG00000010521	snrpd1	78	78.261	Seriola_dumerili
ENSMAUG00000016467	-	86	79.167	ENSSLDG00000011858	snrpd1	81	79.167	Seriola_lalandi_dorsalis
ENSMAUG00000016467	-	60	80.597	ENSSARG00000004271	SNRPD1	100	80.597	Sorex_araneus
ENSMAUG00000016467	-	86	83.333	ENSSPUG00000002824	SNRPD1	81	83.333	Sphenodon_punctatus
ENSMAUG00000016467	-	78	81.609	ENSSPAG00000015229	snrpd1	78	81.609	Stegastes_partitus
ENSMAUG00000016467	-	86	83.333	ENSSSCG00000003701	SNRPD1	81	83.333	Sus_scrofa
ENSMAUG00000016467	-	83	83.696	ENSTGUG00000005095	SNRPD1	77	83.696	Taeniopygia_guttata
ENSMAUG00000016467	-	78	81.609	ENSTRUG00000008977	snrpd1	78	81.609	Takifugu_rubripes
ENSMAUG00000016467	-	69	80.519	ENSTNIG00000001224	snrpd1	74	80.519	Tetraodon_nigroviridis
ENSMAUG00000016467	-	59	87.692	ENSTBEG00000013776	SNRPD1	74	87.692	Tupaia_belangeri
ENSMAUG00000016467	-	83	83.696	ENSTTRG00000002654	SNRPD1	80	83.696	Tursiops_truncatus
ENSMAUG00000016467	-	85	84.043	ENSUAMG00000013431	SNRPD1	91	87.059	Ursus_americanus
ENSMAUG00000016467	-	86	83.333	ENSUMAG00000019740	SNRPD1	81	83.333	Ursus_maritimus
ENSMAUG00000016467	-	86	83.333	ENSVPAG00000010056	SNRPD1	64	83.333	Vicugna_pacos
ENSMAUG00000016467	-	78	86.207	ENSVVUG00000004009	SNRPD1	78	86.207	Vulpes_vulpes
ENSMAUG00000016467	-	86	81.250	ENSXETG00000027354	snrpd1	81	81.250	Xenopus_tropicalis
ENSMAUG00000016467	-	86	79.167	ENSXCOG00000020108	snrpd1	81	79.167	Xiphophorus_couchianus
ENSMAUG00000016467	-	86	79.167	ENSXMAG00000003368	snrpd1	81	79.167	Xiphophorus_maculatus