EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000016512 (Gene tree)
Gene ID: 101828047
Gene Symbol: Upf2
Alias: -
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 99693 bases
Position: chrKB708238.1:988541-1088233
Accession: 101828047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000017756	Upf2	PF04050.14	7.1e-33	1	1
ENSMAUP00000017756	MIF4G	PF02854.19	5.6e-74	1	3
ENSMAUP00000017756	MIF4G	PF02854.19	5.6e-74	2	3
ENSMAUP00000017756	MIF4G	PF02854.19	5.6e-74	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000021710	-	3723	XM_013121357	ENSMAUP00000017756	1240 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000016512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000016512's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000016512	Upf2	100	94.969	ENSG00000151461	UPF2	100	94.969	Homo_sapiens
ENSMAUG00000016512	Upf2	99	76.567	ENSAPOG00000015837	UPF2	100	76.411	Acanthochromis_polyacanthus
ENSMAUG00000016512	Upf2	100	95.830	ENSAMEG00000004586	UPF2	100	95.830	Ailuropoda_melanoleuca
ENSMAUG00000016512	Upf2	99	80.219	ENSACIG00000018078	UPF2	100	80.141	Amphilophus_citrinellus
ENSMAUG00000016512	Upf2	100	80.577	ENSAOCG00000016766	UPF2	100	80.577	Amphiprion_ocellaris
ENSMAUG00000016512	Upf2	100	80.655	ENSAPEG00000019084	UPF2	100	80.655	Amphiprion_percula
ENSMAUG00000016512	Upf2	100	80.404	ENSATEG00000021677	UPF2	99	80.374	Anabas_testudineus
ENSMAUG00000016512	Upf2	100	84.894	ENSAPLG00000010287	UPF2	90	89.130	Anas_platyrhynchos
ENSMAUG00000016512	Upf2	100	89.929	ENSACAG00000009259	UPF2	100	89.614	Anolis_carolinensis
ENSMAUG00000016512	Upf2	99	88.853	ENSANAG00000028451	UPF2	99	87.249	Aotus_nancymaae
ENSMAUG00000016512	Upf2	100	78.532	ENSACLG00000012696	UPF2	100	80.406	Astatotilapia_calliptera
ENSMAUG00000016512	Upf2	99	81.441	ENSAMXG00000013700	UPF2	99	81.519	Astyanax_mexicanus
ENSMAUG00000016512	Upf2	100	95.515	ENSBTAG00000000288	UPF2	100	95.515	Bos_taurus
ENSMAUG00000016512	Upf2	100	95.047	ENSCJAG00000020685	UPF2	100	95.047	Callithrix_jacchus
ENSMAUG00000016512	Upf2	100	95.909	ENSCAFG00000004839	UPF2	100	95.909	Canis_familiaris
ENSMAUG00000016512	Upf2	99	93.612	ENSCAFG00020005882	UPF2	100	93.612	Canis_lupus_dingo
ENSMAUG00000016512	Upf2	100	95.594	ENSCHIG00000020359	UPF2	100	95.594	Capra_hircus
ENSMAUG00000016512	Upf2	100	94.807	ENSTSYG00000000935	UPF2	97	99.435	Carlito_syrichta
ENSMAUG00000016512	Upf2	91	85.201	ENSCAPG00000016658	UPF2	94	85.689	Cavia_aperea
ENSMAUG00000016512	Upf2	99	93.899	ENSCPOG00000008809	UPF2	100	93.899	Cavia_porcellus
ENSMAUG00000016512	Upf2	100	87.893	ENSCCAG00000035991	UPF2	100	88.434	Cebus_capucinus
ENSMAUG00000016512	Upf2	100	95.204	ENSCATG00000032679	UPF2	100	95.204	Cercocebus_atys
ENSMAUG00000016512	Upf2	100	95.515	ENSCLAG00000011434	UPF2	100	95.515	Chinchilla_lanigera
ENSMAUG00000016512	Upf2	100	95.204	ENSCSAG00000013372	UPF2	100	95.204	Chlorocebus_sabaeus
ENSMAUG00000016512	Upf2	87	95.367	ENSCHOG00000000422	UPF2	89	95.367	Choloepus_hoffmanni
ENSMAUG00000016512	Upf2	99	90.071	ENSCPBG00000027823	UPF2	100	90.780	Chrysemys_picta_bellii
ENSMAUG00000016512	Upf2	78	47.250	ENSCSAVG00000007772	-	99	46.238	Ciona_savignyi
ENSMAUG00000016512	Upf2	99	89.132	ENSCANG00000040396	UPF2	100	88.898	Colobus_angolensis_palliatus
ENSMAUG00000016512	Upf2	100	97.557	ENSCGRG00001019347	Upf2	100	97.557	Cricetulus_griseus_chok1gshd
ENSMAUG00000016512	Upf2	100	97.557	ENSCGRG00000017993	Upf2	100	97.557	Cricetulus_griseus_crigri
ENSMAUG00000016512	Upf2	91	78.411	ENSCSEG00000003520	UPF2	91	77.864	Cynoglossus_semilaevis
ENSMAUG00000016512	Upf2	99	80.189	ENSCVAG00000006167	UPF2	100	79.796	Cyprinodon_variegatus
ENSMAUG00000016512	Upf2	100	95.594	ENSDNOG00000018160	UPF2	100	95.594	Dasypus_novemcinctus
ENSMAUG00000016512	Upf2	100	95.827	ENSDORG00000002478	Upf2	100	95.827	Dipodomys_ordii
ENSMAUG00000016512	Upf2	88	35.149	FBgn0029992	Upf2	82	43.750	Drosophila_melanogaster
ENSMAUG00000016512	Upf2	72	100.000	ENSETEG00000011583	-	66	100.000	Echinops_telfairi
ENSMAUG00000016512	Upf2	68	64.723	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSMAUG00000016512	Upf2	100	95.594	ENSEASG00005019274	UPF2	100	98.148	Equus_asinus_asinus
ENSMAUG00000016512	Upf2	100	95.673	ENSECAG00000017022	UPF2	100	95.673	Equus_caballus
ENSMAUG00000016512	Upf2	81	92.652	ENSEEUG00000007819	UPF2	82	92.332	Erinaceus_europaeus
ENSMAUG00000016512	Upf2	99	78.951	ENSELUG00000012014	UPF2	100	79.922	Esox_lucius
ENSMAUG00000016512	Upf2	100	98.895	ENSFCAG00000005785	UPF2	100	95.594	Felis_catus
ENSMAUG00000016512	Upf2	100	90.716	ENSFALG00000001889	UPF2	98	91.188	Ficedula_albicollis
ENSMAUG00000016512	Upf2	100	95.433	ENSFDAG00000014348	UPF2	100	95.433	Fukomys_damarensis
ENSMAUG00000016512	Upf2	99	80.745	ENSFHEG00000009826	UPF2	99	80.428	Fundulus_heteroclitus
ENSMAUG00000016512	Upf2	90	81.574	ENSGMOG00000005557	UPF2	100	78.499	Gadus_morhua
ENSMAUG00000016512	Upf2	100	91.274	ENSGALG00000033772	UPF2	100	91.745	Gallus_gallus
ENSMAUG00000016512	Upf2	100	77.361	ENSGAFG00000020867	UPF2	100	79.157	Gambusia_affinis
ENSMAUG00000016512	Upf2	90	81.865	ENSGACG00000001080	UPF2	100	80.297	Gasterosteus_aculeatus
ENSMAUG00000016512	Upf2	100	91.581	ENSGAGG00000002700	UPF2	100	91.424	Gopherus_agassizii
ENSMAUG00000016512	Upf2	100	94.969	ENSGGOG00000001479	UPF2	100	94.969	Gorilla_gorilla
ENSMAUG00000016512	Upf2	100	78.376	ENSHBUG00000004249	UPF2	100	80.375	Haplochromis_burtoni
ENSMAUG00000016512	Upf2	99	84.676	ENSHGLG00000003822	-	99	82.530	Heterocephalus_glaber_female
ENSMAUG00000016512	Upf2	100	95.358	ENSHGLG00000015176	-	100	95.358	Heterocephalus_glaber_female
ENSMAUG00000016512	Upf2	99	92.035	ENSHGLG00100010036	UPF2	89	94.874	Heterocephalus_glaber_male
ENSMAUG00000016512	Upf2	100	78.649	ENSHCOG00000004025	UPF2	99	78.399	Hippocampus_comes
ENSMAUG00000016512	Upf2	100	80.406	ENSIPUG00000015524	UPF2	100	80.703	Ictalurus_punctatus
ENSMAUG00000016512	Upf2	100	95.906	ENSSTOG00000013075	UPF2	100	95.906	Ictidomys_tridecemlineatus
ENSMAUG00000016512	Upf2	100	94.961	ENSJJAG00000004913	Upf2	100	94.961	Jaculus_jaculus
ENSMAUG00000016512	Upf2	98	80.553	ENSKMAG00000001071	UPF2	99	80.507	Kryptolebias_marmoratus
ENSMAUG00000016512	Upf2	79	80.236	ENSLBEG00000000728	-	93	80.236	Labrus_bergylta
ENSMAUG00000016512	Upf2	100	81.026	ENSLBEG00000016394	-	99	80.841	Labrus_bergylta
ENSMAUG00000016512	Upf2	99	77.882	ENSLACG00000015945	UPF2	100	77.804	Latimeria_chalumnae
ENSMAUG00000016512	Upf2	99	83.688	ENSLOCG00000015698	UPF2	100	84.003	Lepisosteus_oculatus
ENSMAUG00000016512	Upf2	100	95.126	ENSMFAG00000043865	UPF2	100	95.126	Macaca_fascicularis
ENSMAUG00000016512	Upf2	100	95.126	ENSMMUG00000008241	UPF2	100	95.126	Macaca_mulatta
ENSMAUG00000016512	Upf2	80	93.951	ENSMNEG00000008062	UPF2	100	93.951	Macaca_nemestrina
ENSMAUG00000016512	Upf2	95	99.034	ENSMLEG00000036120	UPF2	100	99.034	Mandrillus_leucophaeus
ENSMAUG00000016512	Upf2	100	80.093	ENSMAMG00000018276	UPF2	100	80.218	Mastacembelus_armatus
ENSMAUG00000016512	Upf2	100	78.532	ENSMZEG00005021595	UPF2	100	80.406	Maylandia_zebra
ENSMAUG00000016512	Upf2	99	90.630	ENSMGAG00000004573	UPF2	99	91.102	Meleagris_gallopavo
ENSMAUG00000016512	Upf2	95	98.469	ENSMICG00000001716	UPF2	99	98.469	Microcebus_murinus
ENSMAUG00000016512	Upf2	100	96.612	ENSMOCG00000008263	Upf2	100	96.612	Microtus_ochrogaster
ENSMAUG00000016512	Upf2	99	78.404	ENSMMOG00000006528	UPF2	100	76.724	Mola_mola
ENSMAUG00000016512	Upf2	100	93.784	ENSMODG00000016794	UPF2	100	93.784	Monodelphis_domestica
ENSMAUG00000016512	Upf2	99	79.984	ENSMALG00000002663	UPF2	100	80.266	Monopterus_albus
ENSMAUG00000016512	Upf2	100	96.375	MGP_CAROLIEiJ_G0023157	Upf2	100	99.427	Mus_caroli
ENSMAUG00000016512	Upf2	100	96.375	ENSMUSG00000043241	Upf2	99	98.855	Mus_musculus
ENSMAUG00000016512	Upf2	100	96.217	MGP_PahariEiJ_G0019217	Upf2	100	98.473	Mus_pahari
ENSMAUG00000016512	Upf2	100	96.612	MGP_SPRETEiJ_G0024075	Upf2	100	98.855	Mus_spretus
ENSMAUG00000016512	Upf2	100	95.909	ENSMPUG00000001064	UPF2	100	95.909	Mustela_putorius_furo
ENSMAUG00000016512	Upf2	99	95.051	ENSMLUG00000000228	UPF2	100	95.051	Myotis_lucifugus
ENSMAUG00000016512	Upf2	100	78.532	ENSNBRG00000013629	UPF2	100	80.406	Neolamprologus_brichardi
ENSMAUG00000016512	Upf2	100	95.126	ENSNLEG00000012058	UPF2	100	95.126	Nomascus_leucogenys
ENSMAUG00000016512	Upf2	55	97.409	ENSMEUG00000002180	-	52	97.409	Notamacropus_eugenii
ENSMAUG00000016512	Upf2	81	99.296	ENSOPRG00000006801	-	82	99.296	Ochotona_princeps
ENSMAUG00000016512	Upf2	100	95.201	ENSODEG00000001290	UPF2	100	95.201	Octodon_degus
ENSMAUG00000016512	Upf2	100	78.454	ENSONIG00000017991	UPF2	100	80.328	Oreochromis_niloticus
ENSMAUG00000016512	Upf2	99	94.749	ENSOCUG00000006230	UPF2	100	94.749	Oryctolagus_cuniculus
ENSMAUG00000016512	Upf2	100	78.833	ENSORLG00000017189	UPF2	100	79.641	Oryzias_latipes
ENSMAUG00000016512	Upf2	100	78.833	ENSORLG00020005969	UPF2	100	79.641	Oryzias_latipes_hni
ENSMAUG00000016512	Upf2	100	78.833	ENSORLG00015005713	UPF2	100	79.641	Oryzias_latipes_hsok
ENSMAUG00000016512	Upf2	99	75.351	ENSOMEG00000023420	UPF2	98	76.779	Oryzias_melastigma
ENSMAUG00000016512	Upf2	100	95.594	ENSOGAG00000005796	UPF2	100	95.594	Otolemur_garnettii
ENSMAUG00000016512	Upf2	100	95.444	ENSOARG00000014587	UPF2	100	95.444	Ovis_aries
ENSMAUG00000016512	Upf2	99	91.236	ENSPPAG00000037953	UPF2	100	91.962	Pan_paniscus
ENSMAUG00000016512	Upf2	100	95.594	ENSPPRG00000000690	UPF2	100	95.594	Panthera_pardus
ENSMAUG00000016512	Upf2	100	95.594	ENSPTIG00000008867	UPF2	100	95.594	Panthera_tigris_altaica
ENSMAUG00000016512	Upf2	100	94.969	ENSPTRG00000002291	UPF2	100	94.969	Pan_troglodytes
ENSMAUG00000016512	Upf2	100	95.126	ENSPANG00000023399	UPF2	100	95.126	Papio_anubis
ENSMAUG00000016512	Upf2	100	79.313	ENSPKIG00000025502	UPF2	100	79.001	Paramormyrops_kingsleyae
ENSMAUG00000016512	Upf2	58	88.845	ENSPSIG00000015158	UPF2	95	88.845	Pelodiscus_sinensis
ENSMAUG00000016512	Upf2	99	77.848	ENSPMGG00000005259	UPF2	100	78.381	Periophthalmus_magnuspinnatus
ENSMAUG00000016512	Upf2	93	98.834	ENSPEMG00000015731	Upf2	99	98.834	Peromyscus_maniculatus_bairdii
ENSMAUG00000016512	Upf2	100	93.470	ENSPCIG00000006656	UPF2	100	93.470	Phascolarctos_cinereus
ENSMAUG00000016512	Upf2	100	77.440	ENSPFOG00000017118	UPF2	100	79.625	Poecilia_formosa
ENSMAUG00000016512	Upf2	100	77.440	ENSPLAG00000005094	UPF2	100	79.625	Poecilia_latipinna
ENSMAUG00000016512	Upf2	100	77.440	ENSPMEG00000017009	UPF2	100	79.625	Poecilia_mexicana
ENSMAUG00000016512	Upf2	99	77.351	ENSPREG00000021880	UPF2	100	79.969	Poecilia_reticulata
ENSMAUG00000016512	Upf2	65	95.096	ENSPPYG00000002089	-	100	95.096	Pongo_abelii
ENSMAUG00000016512	Upf2	100	81.275	ENSPCAG00000000684	UPF2	100	81.275	Procavia_capensis
ENSMAUG00000016512	Upf2	99	92.114	ENSPCOG00000021656	UPF2	100	92.114	Propithecus_coquereli
ENSMAUG00000016512	Upf2	100	87.736	ENSPVAG00000017286	UPF2	100	87.736	Pteropus_vampyrus
ENSMAUG00000016512	Upf2	99	77.435	ENSPNYG00000017096	UPF2	100	79.335	Pundamilia_nyererei
ENSMAUG00000016512	Upf2	100	81.889	ENSPNAG00000009357	UPF2	100	82.123	Pygocentrus_nattereri
ENSMAUG00000016512	Upf2	99	90.723	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSMAUG00000016512	Upf2	99	94.322	ENSRBIG00000037780	UPF2	100	94.322	Rhinopithecus_bieti
ENSMAUG00000016512	Upf2	100	95.201	ENSRROG00000043547	UPF2	100	95.201	Rhinopithecus_roxellana
ENSMAUG00000016512	Upf2	100	95.122	ENSSBOG00000020012	UPF2	100	95.122	Saimiri_boliviensis_boliviensis
ENSMAUG00000016512	Upf2	100	79.034	ENSSFOG00015023788	upf2	100	80.592	Scleropages_formosus
ENSMAUG00000016512	Upf2	90	80.469	ENSSMAG00000007637	UPF2	100	76.899	Scophthalmus_maximus
ENSMAUG00000016512	Upf2	100	80.718	ENSSDUG00000017244	UPF2	99	80.655	Seriola_dumerili
ENSMAUG00000016512	Upf2	99	79.059	ENSSLDG00000016866	UPF2	82	81.613	Seriola_lalandi_dorsalis
ENSMAUG00000016512	Upf2	100	93.312	ENSSARG00000008615	UPF2	100	93.312	Sorex_araneus
ENSMAUG00000016512	Upf2	99	88.268	ENSSPUG00000014544	UPF2	99	87.874	Sphenodon_punctatus
ENSMAUG00000016512	Upf2	68	95.052	ENSSSCG00000011117	-	100	95.052	Sus_scrofa
ENSMAUG00000016512	Upf2	99	91.246	ENSTGUG00000002163	-	100	91.167	Taeniopygia_guttata
ENSMAUG00000016512	Upf2	100	80.062	ENSTRUG00000007519	UPF2	99	80.109	Takifugu_rubripes
ENSMAUG00000016512	Upf2	100	77.683	ENSTNIG00000004453	UPF2	94	81.570	Tetraodon_nigroviridis
ENSMAUG00000016512	Upf2	93	88.380	ENSTBEG00000012679	UPF2	93	88.380	Tupaia_belangeri
ENSMAUG00000016512	Upf2	100	95.358	ENSTTRG00000016388	UPF2	100	95.358	Tursiops_truncatus
ENSMAUG00000016512	Upf2	94	99.306	ENSUAMG00000023560	UPF2	100	95.175	Ursus_americanus
ENSMAUG00000016512	Upf2	100	95.751	ENSUMAG00000012953	UPF2	95	95.751	Ursus_maritimus
ENSMAUG00000016512	Upf2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSMAUG00000016512	Upf2	100	95.830	ENSVVUG00000006166	UPF2	100	95.830	Vulpes_vulpes
ENSMAUG00000016512	Upf2	100	81.216	ENSXETG00000033103	UPF2	91	86.592	Xenopus_tropicalis
ENSMAUG00000016512	Upf2	99	77.091	ENSXCOG00000011604	UPF2	100	79.281	Xiphophorus_couchianus
ENSMAUG00000016512	Upf2	100	77.283	ENSXMAG00000017209	UPF2	100	79.313	Xiphophorus_maculatus