EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000016624 (Gene tree)
Gene ID: 101830225
Gene Symbol: Lsm10
Alias: -
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 2414 bases
Position: chrAPMT01215896.1:3366-5779
Accession: 101830225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000017876	LSM	PF01423.22	1.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000021831	-	862	XM_013126967	ENSMAUP00000017876	122 (aa)	XP_012982421	A0A1U8CSD3

Gene Model

Click here to download ENSMAUG00000016624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000016624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000016624	Lsm10	56	31.429	ENSMAUG00000021966	Lsm2	74	31.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000016624	Lsm10	98	90.833	ENSG00000181817	LSM10	98	90.833	Homo_sapiens
ENSMAUG00000016624	Lsm10	99	89.256	ENSAMEG00000019854	LSM10	98	89.256	Ailuropoda_melanoleuca
ENSMAUG00000016624	Lsm10	97	67.797	ENSACIG00000015420	oscp1a	78	67.797	Amphilophus_citrinellus
ENSMAUG00000016624	Lsm10	94	70.435	ENSAOCG00000014654	-	95	70.435	Amphiprion_ocellaris
ENSMAUG00000016624	Lsm10	91	67.568	ENSAOCG00000015607	LSM10	86	67.568	Amphiprion_ocellaris
ENSMAUG00000016624	Lsm10	94	70.435	ENSAOCG00000015618	LSM10	95	70.435	Amphiprion_ocellaris
ENSMAUG00000016624	Lsm10	94	70.435	ENSAPEG00000021845	-	95	70.435	Amphiprion_percula
ENSMAUG00000016624	Lsm10	91	67.568	ENSAPEG00000021851	LSM10	86	67.568	Amphiprion_percula
ENSMAUG00000016624	Lsm10	92	64.286	ENSATEG00000006310	oscp1a	83	64.286	Anabas_testudineus
ENSMAUG00000016624	Lsm10	96	70.940	ENSACAG00000001231	LSM10	95	70.940	Anolis_carolinensis
ENSMAUG00000016624	Lsm10	98	91.667	ENSANAG00000018759	-	98	91.667	Aotus_nancymaae
ENSMAUG00000016624	Lsm10	98	90.000	ENSANAG00000031489	-	98	90.000	Aotus_nancymaae
ENSMAUG00000016624	Lsm10	95	68.103	ENSACLG00000004728	oscp1a	94	68.103	Astatotilapia_calliptera
ENSMAUG00000016624	Lsm10	97	67.797	ENSAMXG00000025301	oscp1a	98	67.797	Astyanax_mexicanus
ENSMAUG00000016624	Lsm10	98	88.333	ENSBTAG00000024096	LSM10	98	88.333	Bos_taurus
ENSMAUG00000016624	Lsm10	98	90.833	ENSCJAG00000044880	LSM10	98	90.833	Callithrix_jacchus
ENSMAUG00000016624	Lsm10	99	92.562	ENSCAFG00000003382	LSM10	98	92.562	Canis_familiaris
ENSMAUG00000016624	Lsm10	99	92.562	ENSCAFG00020008920	LSM10	98	92.562	Canis_lupus_dingo
ENSMAUG00000016624	Lsm10	98	88.333	ENSCHIG00000009398	LSM10	98	88.333	Capra_hircus
ENSMAUG00000016624	Lsm10	99	88.430	ENSCAPG00000012567	LSM10	98	88.430	Cavia_aperea
ENSMAUG00000016624	Lsm10	99	88.430	ENSCPOG00000039302	LSM10	98	88.430	Cavia_porcellus
ENSMAUG00000016624	Lsm10	98	91.667	ENSCCAG00000018913	-	98	91.667	Cebus_capucinus
ENSMAUG00000016624	Lsm10	98	88.333	ENSCCAG00000008378	-	98	88.333	Cebus_capucinus
ENSMAUG00000016624	Lsm10	98	92.500	ENSCATG00000006589	LSM10	98	92.500	Cercocebus_atys
ENSMAUG00000016624	Lsm10	99	90.083	ENSCLAG00000008633	LSM10	98	90.083	Chinchilla_lanigera
ENSMAUG00000016624	Lsm10	98	92.500	ENSCSAG00000000134	LSM10	98	92.500	Chlorocebus_sabaeus
ENSMAUG00000016624	Lsm10	100	88.710	ENSCHOG00000008615	LSM10	99	88.710	Choloepus_hoffmanni
ENSMAUG00000016624	Lsm10	84	32.353	ENSCSAVG00000001896	-	87	32.353	Ciona_savignyi
ENSMAUG00000016624	Lsm10	98	92.500	ENSCANG00000019928	LSM10	98	92.500	Colobus_angolensis_palliatus
ENSMAUG00000016624	Lsm10	100	97.541	ENSCGRG00001004317	-	100	97.541	Cricetulus_griseus_chok1gshd
ENSMAUG00000016624	Lsm10	95	86.441	ENSCGRG00001022673	-	95	86.441	Cricetulus_griseus_chok1gshd
ENSMAUG00000016624	Lsm10	100	97.541	ENSCGRG00000014935	-	100	97.541	Cricetulus_griseus_crigri
ENSMAUG00000016624	Lsm10	95	86.441	ENSCGRG00000015514	-	95	86.441	Cricetulus_griseus_crigri
ENSMAUG00000016624	Lsm10	95	63.793	ENSCSEG00000010374	oscp1a	77	64.348	Cynoglossus_semilaevis
ENSMAUG00000016624	Lsm10	98	65.546	ENSCVAG00000001536	oscp1a	90	65.546	Cyprinodon_variegatus
ENSMAUG00000016624	Lsm10	99	71.074	ENSDARG00000101222	oscp1a	100	71.074	Danio_rerio
ENSMAUG00000016624	Lsm10	70	71.765	ENSDARG00000109563	CABZ01074453.1	99	71.765	Danio_rerio
ENSMAUG00000016624	Lsm10	98	92.500	ENSDNOG00000036662	LSM10	98	92.500	Dasypus_novemcinctus
ENSMAUG00000016624	Lsm10	100	90.984	ENSDORG00000007579	Lsm10	99	90.984	Dipodomys_ordii
ENSMAUG00000016624	Lsm10	99	89.256	ENSETEG00000005703	LSM10	98	89.256	Echinops_telfairi
ENSMAUG00000016624	Lsm10	99	53.719	ENSEBUG00000001312	oscp1a	99	53.719	Eptatretus_burgeri
ENSMAUG00000016624	Lsm10	99	92.562	ENSEASG00005012194	LSM10	98	92.562	Equus_asinus_asinus
ENSMAUG00000016624	Lsm10	99	93.388	ENSECAG00000005071	LSM10	98	93.388	Equus_caballus
ENSMAUG00000016624	Lsm10	99	90.909	ENSEEUG00000012032	LSM10	98	90.909	Erinaceus_europaeus
ENSMAUG00000016624	Lsm10	99	67.769	ENSELUG00000007452	oscp1a	99	67.769	Esox_lucius
ENSMAUG00000016624	Lsm10	96	74.359	ENSFALG00000000851	LSM10	95	74.359	Ficedula_albicollis
ENSMAUG00000016624	Lsm10	99	86.777	ENSFDAG00000021056	LSM10	98	86.777	Fukomys_damarensis
ENSMAUG00000016624	Lsm10	89	68.182	ENSFHEG00000001058	oscp1a	95	68.182	Fundulus_heteroclitus
ENSMAUG00000016624	Lsm10	87	66.981	ENSGMOG00000019832	oscp1a	89	66.981	Gadus_morhua
ENSMAUG00000016624	Lsm10	97	76.271	ENSGALG00000002127	LSM10	96	76.271	Gallus_gallus
ENSMAUG00000016624	Lsm10	96	60.833	ENSGAFG00000016445	oscp1a	96	60.833	Gambusia_affinis
ENSMAUG00000016624	Lsm10	95	65.517	ENSGACG00000002329	oscp1a	95	65.517	Gasterosteus_aculeatus
ENSMAUG00000016624	Lsm10	99	73.554	ENSGAGG00000024848	LSM10	98	73.554	Gopherus_agassizii
ENSMAUG00000016624	Lsm10	98	92.500	ENSGGOG00000003556	LSM10	98	92.500	Gorilla_gorilla
ENSMAUG00000016624	Lsm10	95	68.103	ENSHBUG00000001722	oscp1a	94	68.103	Haplochromis_burtoni
ENSMAUG00000016624	Lsm10	99	87.603	ENSHGLG00000011625	LSM10	98	87.603	Heterocephalus_glaber_female
ENSMAUG00000016624	Lsm10	99	87.603	ENSHGLG00100001769	LSM10	98	87.603	Heterocephalus_glaber_male
ENSMAUG00000016624	Lsm10	86	69.524	ENSIPUG00000005808	oscp1a	91	69.524	Ictalurus_punctatus
ENSMAUG00000016624	Lsm10	99	90.909	ENSSTOG00000000606	LSM10	98	90.909	Ictidomys_tridecemlineatus
ENSMAUG00000016624	Lsm10	95	65.517	ENSKMAG00000012143	oscp1a	96	65.517	Kryptolebias_marmoratus
ENSMAUG00000016624	Lsm10	98	65.833	ENSLBEG00000017764	oscp1a	98	65.833	Labrus_bergylta
ENSMAUG00000016624	Lsm10	99	72.727	ENSLACG00000015904	LSM10	93	72.727	Latimeria_chalumnae
ENSMAUG00000016624	Lsm10	98	70.833	ENSLOCG00000018277	oscp1a	98	70.833	Lepisosteus_oculatus
ENSMAUG00000016624	Lsm10	98	93.333	ENSLAFG00000009600	LSM10	98	93.333	Loxodonta_africana
ENSMAUG00000016624	Lsm10	98	92.500	ENSMFAG00000009115	LSM10	98	92.500	Macaca_fascicularis
ENSMAUG00000016624	Lsm10	98	92.500	ENSMMUG00000017338	LSM10	98	92.500	Macaca_mulatta
ENSMAUG00000016624	Lsm10	98	92.500	ENSMNEG00000020023	LSM10	98	92.500	Macaca_nemestrina
ENSMAUG00000016624	Lsm10	98	92.500	ENSMLEG00000025150	LSM10	98	92.500	Mandrillus_leucophaeus
ENSMAUG00000016624	Lsm10	98	65.000	ENSMAMG00000004427	oscp1a	98	65.000	Mastacembelus_armatus
ENSMAUG00000016624	Lsm10	95	68.103	ENSMZEG00005026307	oscp1a	94	68.103	Maylandia_zebra
ENSMAUG00000016624	Lsm10	99	73.554	ENSMGAG00000015707	LSM10	98	73.554	Meleagris_gallopavo
ENSMAUG00000016624	Lsm10	99	98.347	ENSMOCG00000021943	Lsm10	99	98.347	Microtus_ochrogaster
ENSMAUG00000016624	Lsm10	91	68.468	ENSMMOG00000013597	oscp1a	83	68.468	Mola_mola
ENSMAUG00000016624	Lsm10	99	83.471	ENSMODG00000023328	LSM10	98	83.471	Monodelphis_domestica
ENSMAUG00000016624	Lsm10	57	60.811	ENSMALG00000012661	oscp1a	58	60.811	Monopterus_albus
ENSMAUG00000016624	Lsm10	99	94.215	MGP_CAROLIEiJ_G0026467	Lsm10	99	94.215	Mus_caroli
ENSMAUG00000016624	Lsm10	99	95.041	ENSMUSG00000050188	Lsm10	99	95.041	Mus_musculus
ENSMAUG00000016624	Lsm10	99	95.041	MGP_PahariEiJ_G0028798	Lsm10	99	95.041	Mus_pahari
ENSMAUG00000016624	Lsm10	99	95.041	MGP_SPRETEiJ_G0027446	Lsm10	99	95.041	Mus_spretus
ENSMAUG00000016624	Lsm10	99	92.562	ENSMPUG00000018593	LSM10	98	92.562	Mustela_putorius_furo
ENSMAUG00000016624	Lsm10	99	86.777	ENSMLUG00000023895	LSM10	98	86.777	Myotis_lucifugus
ENSMAUG00000016624	Lsm10	99	94.215	ENSNGAG00000015011	Lsm10	98	94.215	Nannospalax_galili
ENSMAUG00000016624	Lsm10	95	68.966	ENSNBRG00000014306	oscp1a	94	68.966	Neolamprologus_brichardi
ENSMAUG00000016624	Lsm10	98	92.500	ENSNLEG00000033754	LSM10	98	92.500	Nomascus_leucogenys
ENSMAUG00000016624	Lsm10	99	83.471	ENSMEUG00000006313	LSM10	98	83.471	Notamacropus_eugenii
ENSMAUG00000016624	Lsm10	99	90.909	ENSOPRG00000001699	LSM10	98	90.909	Ochotona_princeps
ENSMAUG00000016624	Lsm10	99	90.083	ENSODEG00000019161	LSM10	98	90.083	Octodon_degus
ENSMAUG00000016624	Lsm10	95	68.966	ENSONIG00000020904	oscp1a	95	68.966	Oreochromis_niloticus
ENSMAUG00000016624	Lsm10	99	76.860	ENSOANG00000002066	LSM10	98	76.860	Ornithorhynchus_anatinus
ENSMAUG00000016624	Lsm10	99	89.256	ENSOCUG00000005333	LSM10	98	89.256	Oryctolagus_cuniculus
ENSMAUG00000016624	Lsm10	96	67.521	ENSORLG00000009504	oscp1a	97	67.521	Oryzias_latipes
ENSMAUG00000016624	Lsm10	96	67.521	ENSORLG00020016201	oscp1a	97	67.521	Oryzias_latipes_hni
ENSMAUG00000016624	Lsm10	96	67.521	ENSORLG00015007794	oscp1a	97	67.521	Oryzias_latipes_hsok
ENSMAUG00000016624	Lsm10	99	90.083	ENSOGAG00000002653	LSM10	98	90.083	Otolemur_garnettii
ENSMAUG00000016624	Lsm10	98	88.333	ENSOARG00000009596	LSM10	98	88.333	Ovis_aries
ENSMAUG00000016624	Lsm10	98	90.833	ENSPPAG00000023465	LSM10	98	90.833	Pan_paniscus
ENSMAUG00000016624	Lsm10	99	92.562	ENSPPRG00000014619	LSM10	98	92.562	Panthera_pardus
ENSMAUG00000016624	Lsm10	99	92.562	ENSPTIG00000004613	LSM10	98	92.562	Panthera_tigris_altaica
ENSMAUG00000016624	Lsm10	98	90.833	ENSPTRG00000000539	LSM10	98	90.833	Pan_troglodytes
ENSMAUG00000016624	Lsm10	98	92.500	ENSPANG00000023172	LSM10	98	92.500	Papio_anubis
ENSMAUG00000016624	Lsm10	98	65.833	ENSPKIG00000003728	oscp1a	97	65.833	Paramormyrops_kingsleyae
ENSMAUG00000016624	Lsm10	99	72.727	ENSPSIG00000000590	LSM10	98	72.727	Pelodiscus_sinensis
ENSMAUG00000016624	Lsm10	62	65.789	ENSPMGG00000015718	oscp1a	99	65.789	Periophthalmus_magnuspinnatus
ENSMAUG00000016624	Lsm10	100	76.230	ENSPCIG00000014865	LSM10	88	76.230	Phascolarctos_cinereus
ENSMAUG00000016624	Lsm10	92	68.750	ENSPFOG00000020490	oscp1a	95	68.750	Poecilia_formosa
ENSMAUG00000016624	Lsm10	92	68.750	ENSPLAG00000016537	oscp1a	85	68.750	Poecilia_latipinna
ENSMAUG00000016624	Lsm10	89	69.444	ENSPMEG00000000174	oscp1a	94	69.444	Poecilia_mexicana
ENSMAUG00000016624	Lsm10	92	67.857	ENSPREG00000009899	oscp1a	85	67.857	Poecilia_reticulata
ENSMAUG00000016624	Lsm10	98	91.667	ENSPPYG00000001539	LSM10	98	91.667	Pongo_abelii
ENSMAUG00000016624	Lsm10	97	91.525	ENSPCAG00000002520	LSM10	97	91.525	Procavia_capensis
ENSMAUG00000016624	Lsm10	99	87.603	ENSPVAG00000008644	LSM10	98	87.603	Pteropus_vampyrus
ENSMAUG00000016624	Lsm10	95	68.103	ENSPNYG00000003138	oscp1a	94	68.103	Pundamilia_nyererei
ENSMAUG00000016624	Lsm10	96	67.521	ENSPNAG00000028829	oscp1a	97	67.521	Pygocentrus_nattereri
ENSMAUG00000016624	Lsm10	99	95.868	ENSRNOG00000025716	Lsm10	99	95.868	Rattus_norvegicus
ENSMAUG00000016624	Lsm10	98	92.500	ENSRBIG00000001561	LSM10	98	92.500	Rhinopithecus_bieti
ENSMAUG00000016624	Lsm10	98	92.500	ENSRROG00000011414	LSM10	98	92.500	Rhinopithecus_roxellana
ENSMAUG00000016624	Lsm10	98	91.667	ENSSBOG00000036413	-	98	91.667	Saimiri_boliviensis_boliviensis
ENSMAUG00000016624	Lsm10	99	82.645	ENSSHAG00000018056	LSM10	98	82.645	Sarcophilus_harrisii
ENSMAUG00000016624	Lsm10	99	64.463	ENSSFOG00015019954	lsm10	99	64.463	Scleropages_formosus
ENSMAUG00000016624	Lsm10	94	66.957	ENSSMAG00000001297	oscp1a	98	66.957	Scophthalmus_maximus
ENSMAUG00000016624	Lsm10	95	64.655	ENSSDUG00000007090	oscp1a	94	64.655	Seriola_dumerili
ENSMAUG00000016624	Lsm10	95	65.517	ENSSLDG00000000800	oscp1a	96	65.517	Seriola_lalandi_dorsalis
ENSMAUG00000016624	Lsm10	99	87.805	ENSSARG00000004211	LSM10	98	89.431	Sorex_araneus
ENSMAUG00000016624	Lsm10	95	67.241	ENSSPAG00000009229	oscp1a	96	67.241	Stegastes_partitus
ENSMAUG00000016624	Lsm10	98	89.167	ENSSSCG00000038916	LSM10	98	89.167	Sus_scrofa
ENSMAUG00000016624	Lsm10	99	72.727	ENSTGUG00000001602	-	99	72.727	Taeniopygia_guttata
ENSMAUG00000016624	Lsm10	99	72.727	ENSTGUG00000001600	-	99	72.727	Taeniopygia_guttata
ENSMAUG00000016624	Lsm10	95	66.379	ENSTRUG00000010531	oscp1a	94	66.379	Takifugu_rubripes
ENSMAUG00000016624	Lsm10	98	93.333	ENSTBEG00000016674	LSM10	98	93.333	Tupaia_belangeri
ENSMAUG00000016624	Lsm10	99	90.083	ENSUAMG00000020265	LSM10	98	90.083	Ursus_americanus
ENSMAUG00000016624	Lsm10	99	90.083	ENSUMAG00000001438	LSM10	56	90.083	Ursus_maritimus
ENSMAUG00000016624	Lsm10	99	92.562	ENSVVUG00000023209	LSM10	98	92.562	Vulpes_vulpes
ENSMAUG00000016624	Lsm10	99	67.769	ENSXETG00000027631	lsm10	98	67.769	Xenopus_tropicalis
ENSMAUG00000016624	Lsm10	94	65.217	ENSXCOG00000018776	oscp1a	72	65.217	Xiphophorus_couchianus
ENSMAUG00000016624	Lsm10	96	64.167	ENSXMAG00000019963	oscp1a	96	64.167	Xiphophorus_maculatus