EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000016976 (Gene tree)
Gene ID: 101824347
Gene Symbol: Lsg1
Alias: D16Bwg1547e
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 24335 bases
Position: chrKB708155.1:9767398-9791732
Accession: 101824347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000018430	MMR_HSR1	PF01926.23	4.5e-14	1	1
ENSMAUP00000018420	MMR_HSR1	PF01926.23	4.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000022390	-	1863	-	ENSMAUP00000018430	620 (aa)	-	-
ENSMAUT00000022380	-	1893	XM_013114427	ENSMAUP00000018420	630 (aa)	XP_012969881	-

Gene Model

Click here to download ENSMAUG00000016976's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000016976's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000016976	Lsg1	93	80.597	ENSG00000041802	LSG1	98	91.477	Homo_sapiens
ENSMAUG00000016976	Lsg1	92	64.334	ENSAPOG00000009694	lsg1	91	64.757	Acanthochromis_polyacanthus
ENSMAUG00000016976	Lsg1	93	78.808	ENSAMEG00000009343	LSG1	91	78.146	Ailuropoda_melanoleuca
ENSMAUG00000016976	Lsg1	90	64.912	ENSACIG00000012406	lsg1	91	63.317	Amphilophus_citrinellus
ENSMAUG00000016976	Lsg1	92	63.543	ENSAOCG00000016066	lsg1	91	63.951	Amphiprion_ocellaris
ENSMAUG00000016976	Lsg1	91	65.165	ENSAPEG00000003252	lsg1	91	64.471	Amphiprion_percula
ENSMAUG00000016976	Lsg1	97	61.889	ENSATEG00000011794	lsg1	99	64.796	Anabas_testudineus
ENSMAUG00000016976	Lsg1	87	66.075	ENSACAG00000004222	LSG1	90	65.187	Anolis_carolinensis
ENSMAUG00000016976	Lsg1	93	81.758	ENSANAG00000021153	LSG1	91	80.929	Aotus_nancymaae
ENSMAUG00000016976	Lsg1	93	63.167	ENSACLG00000000520	lsg1	91	61.111	Astatotilapia_calliptera
ENSMAUG00000016976	Lsg1	94	62.295	ENSAMXG00000008271	lsg1	93	61.639	Astyanax_mexicanus
ENSMAUG00000016976	Lsg1	93	80.737	ENSBTAG00000008461	LSG1	91	80.067	Bos_taurus
ENSMAUG00000016976	Lsg1	73	48.792	WBGene00016907	C53H9.2	95	53.571	Caenorhabditis_elegans
ENSMAUG00000016976	Lsg1	93	81.924	ENSCJAG00000013962	LSG1	91	81.095	Callithrix_jacchus
ENSMAUG00000016976	Lsg1	87	79.754	ENSCAFG00000013445	LSG1	91	79.049	Canis_familiaris
ENSMAUG00000016976	Lsg1	93	78.642	ENSCAFG00020002216	LSG1	90	79.078	Canis_lupus_dingo
ENSMAUG00000016976	Lsg1	93	80.905	ENSCHIG00000015769	LSG1	91	81.072	Capra_hircus
ENSMAUG00000016976	Lsg1	98	79.624	ENSTSYG00000001447	LSG1	96	78.694	Carlito_syrichta
ENSMAUG00000016976	Lsg1	87	75.725	ENSCAPG00000009856	LSG1	90	74.275	Cavia_aperea
ENSMAUG00000016976	Lsg1	93	82.747	ENSCCAG00000035744	LSG1	91	82.747	Cebus_capucinus
ENSMAUG00000016976	Lsg1	93	81.095	ENSCATG00000042060	LSG1	91	79.602	Cercocebus_atys
ENSMAUG00000016976	Lsg1	93	81.924	ENSCSAG00000008796	LSG1	84	81.592	Chlorocebus_sabaeus
ENSMAUG00000016976	Lsg1	99	64.319	ENSCPBG00000015941	LSG1	76	66.942	Chrysemys_picta_bellii
ENSMAUG00000016976	Lsg1	74	61.579	ENSCING00000007079	-	99	61.579	Ciona_intestinalis
ENSMAUG00000016976	Lsg1	70	62.500	ENSCSAVG00000002514	-	88	61.224	Ciona_savignyi
ENSMAUG00000016976	Lsg1	93	80.929	ENSCANG00000030709	LSG1	91	80.265	Colobus_angolensis_palliatus
ENSMAUG00000016976	Lsg1	93	95.478	ENSCGRG00001019846	Lsg1	91	95.478	Cricetulus_griseus_chok1gshd
ENSMAUG00000016976	Lsg1	93	94.416	ENSCGRG00000014617	Lsg1	91	94.416	Cricetulus_griseus_crigri
ENSMAUG00000016976	Lsg1	90	63.465	ENSCSEG00000008522	lsg1	91	60.656	Cynoglossus_semilaevis
ENSMAUG00000016976	Lsg1	90	67.376	ENSCVAG00000002484	lsg1	96	64.182	Cyprinodon_variegatus
ENSMAUG00000016976	Lsg1	94	64.842	ENSDARG00000015352	lsg1	93	64.677	Danio_rerio
ENSMAUG00000016976	Lsg1	96	77.990	ENSDNOG00000006224	LSG1	95	77.033	Dasypus_novemcinctus
ENSMAUG00000016976	Lsg1	86	87.013	ENSETEG00000003888	LSG1	86	87.013	Echinops_telfairi
ENSMAUG00000016976	Lsg1	80	56.309	ENSEBUG00000003119	lsg1	76	56.167	Eptatretus_burgeri
ENSMAUG00000016976	Lsg1	98	78.370	ENSEASG00005000678	LSG1	96	78.370	Equus_asinus_asinus
ENSMAUG00000016976	Lsg1	98	78.370	ENSECAG00000017659	LSG1	96	78.370	Equus_caballus
ENSMAUG00000016976	Lsg1	80	74.138	ENSEEUG00000015217	LSG1	78	74.138	Erinaceus_europaeus
ENSMAUG00000016976	Lsg1	99	59.295	ENSELUG00000023973	lsg1	95	59.677	Esox_lucius
ENSMAUG00000016976	Lsg1	93	80.597	ENSFCAG00000024957	LSG1	91	80.597	Felis_catus
ENSMAUG00000016976	Lsg1	97	59.528	ENSFALG00000007210	LSG1	96	58.740	Ficedula_albicollis
ENSMAUG00000016976	Lsg1	93	78.024	ENSFDAG00000017373	LSG1	91	77.172	Fukomys_damarensis
ENSMAUG00000016976	Lsg1	90	65.018	ENSFHEG00000003680	lsg1	91	62.479	Fundulus_heteroclitus
ENSMAUG00000016976	Lsg1	90	60.633	ENSGMOG00000015834	lsg1	81	69.008	Gadus_morhua
ENSMAUG00000016976	Lsg1	98	58.114	ENSGALG00000007058	LSG1	86	62.927	Gallus_gallus
ENSMAUG00000016976	Lsg1	90	67.806	ENSGAFG00000015831	lsg1	90	67.422	Gambusia_affinis
ENSMAUG00000016976	Lsg1	90	63.066	ENSGACG00000009323	lsg1	91	62.309	Gasterosteus_aculeatus
ENSMAUG00000016976	Lsg1	93	80.763	ENSGGOG00000000520	LSG1	91	80.100	Gorilla_gorilla
ENSMAUG00000016976	Lsg1	93	63.912	ENSHBUG00000005659	lsg1	91	63.069	Haplochromis_burtoni
ENSMAUG00000016976	Lsg1	93	77.853	ENSHGLG00000017390	LSG1	91	78.876	Heterocephalus_glaber_female
ENSMAUG00000016976	Lsg1	93	77.853	ENSHGLG00100018587	LSG1	91	78.876	Heterocephalus_glaber_male
ENSMAUG00000016976	Lsg1	90	64.488	ENSHCOG00000016848	lsg1	91	63.699	Hippocampus_comes
ENSMAUG00000016976	Lsg1	94	63.744	ENSIPUG00000008631	lsg1	93	63.591	Ictalurus_punctatus
ENSMAUG00000016976	Lsg1	73	78.261	ENSSTOG00000010234	LSG1	88	77.803	Ictidomys_tridecemlineatus
ENSMAUG00000016976	Lsg1	93	80.750	ENSJJAG00000015513	Lsg1	91	80.579	Jaculus_jaculus
ENSMAUG00000016976	Lsg1	95	61.809	ENSKMAG00000009681	lsg1	95	61.601	Kryptolebias_marmoratus
ENSMAUG00000016976	Lsg1	97	60.099	ENSLBEG00000024261	lsg1	97	59.744	Labrus_bergylta
ENSMAUG00000016976	Lsg1	93	63.235	ENSLACG00000013399	LSG1	91	63.072	Latimeria_chalumnae
ENSMAUG00000016976	Lsg1	93	62.097	ENSLOCG00000004918	lsg1	95	63.507	Lepisosteus_oculatus
ENSMAUG00000016976	Lsg1	94	79.801	ENSLAFG00000012919	-	93	79.305	Loxodonta_africana
ENSMAUG00000016976	Lsg1	93	81.426	ENSMFAG00000039903	LSG1	91	79.934	Macaca_fascicularis
ENSMAUG00000016976	Lsg1	93	81.592	ENSMMUG00000010708	LSG1	91	80.929	Macaca_mulatta
ENSMAUG00000016976	Lsg1	93	81.592	ENSMNEG00000031538	LSG1	91	80.100	Macaca_nemestrina
ENSMAUG00000016976	Lsg1	93	81.260	ENSMLEG00000041184	LSG1	91	80.597	Mandrillus_leucophaeus
ENSMAUG00000016976	Lsg1	93	63.884	ENSMAMG00000000470	lsg1	90	63.311	Mastacembelus_armatus
ENSMAUG00000016976	Lsg1	93	64.081	ENSMZEG00005017865	lsg1	91	63.238	Maylandia_zebra
ENSMAUG00000016976	Lsg1	84	60.682	ENSMGAG00000007050	LSG1	93	63.636	Meleagris_gallopavo
ENSMAUG00000016976	Lsg1	93	81.500	ENSMICG00000049087	LSG1	91	81.000	Microcebus_murinus
ENSMAUG00000016976	Lsg1	93	90.460	ENSMOCG00000022136	Lsg1	91	90.290	Microtus_ochrogaster
ENSMAUG00000016976	Lsg1	76	74.026	ENSMMOG00000008884	lsg1	90	63.014	Mola_mola
ENSMAUG00000016976	Lsg1	92	57.843	ENSMODG00000019828	LSG1	91	57.096	Monodelphis_domestica
ENSMAUG00000016976	Lsg1	97	83.736	MGP_CAROLIEiJ_G0020648	Lsg1	96	83.736	Mus_caroli
ENSMAUG00000016976	Lsg1	97	84.380	ENSMUSG00000022538	Lsg1	96	84.380	Mus_musculus
ENSMAUG00000016976	Lsg1	95	84.117	MGP_PahariEiJ_G0016352	Lsg1	96	84.102	Mus_pahari
ENSMAUG00000016976	Lsg1	97	84.102	MGP_SPRETEiJ_G0021544	Lsg1	96	84.102	Mus_spretus
ENSMAUG00000016976	Lsg1	93	78.275	ENSMPUG00000003734	LSG1	91	77.612	Mustela_putorius_furo
ENSMAUG00000016976	Lsg1	93	83.752	ENSMLUG00000012548	LSG1	91	83.082	Myotis_lucifugus
ENSMAUG00000016976	Lsg1	93	85.908	ENSNGAG00000021872	Lsg1	91	85.908	Nannospalax_galili
ENSMAUG00000016976	Lsg1	93	81.095	ENSNLEG00000008293	LSG1	91	80.431	Nomascus_leucogenys
ENSMAUG00000016976	Lsg1	67	72.165	ENSMEUG00000009041	-	80	72.165	Notamacropus_eugenii
ENSMAUG00000016976	Lsg1	93	63.317	ENSONIG00000002635	lsg1	91	63.149	Oreochromis_niloticus
ENSMAUG00000016976	Lsg1	90	70.968	ENSOANG00000012742	LSG1	94	69.949	Ornithorhynchus_anatinus
ENSMAUG00000016976	Lsg1	93	82.090	ENSOCUG00000004817	LSG1	91	82.587	Oryctolagus_cuniculus
ENSMAUG00000016976	Lsg1	90	64.937	ENSORLG00000007695	lsg1	90	63.918	Oryzias_latipes
ENSMAUG00000016976	Lsg1	90	65.271	ENSORLG00020016286	lsg1	90	63.605	Oryzias_latipes_hni
ENSMAUG00000016976	Lsg1	90	65.832	ENSORLG00015012025	lsg1	90	65.157	Oryzias_latipes_hsok
ENSMAUG00000016976	Lsg1	90	63.826	ENSOMEG00000022379	lsg1	91	63.855	Oryzias_melastigma
ENSMAUG00000016976	Lsg1	93	80.725	ENSOGAG00000003475	LSG1	91	80.560	Otolemur_garnettii
ENSMAUG00000016976	Lsg1	93	79.564	ENSOARG00000020403	LSG1	91	79.766	Ovis_aries
ENSMAUG00000016976	Lsg1	93	80.431	ENSPPAG00000029271	LSG1	91	79.768	Pan_paniscus
ENSMAUG00000016976	Lsg1	93	79.672	ENSPPRG00000010281	LSG1	91	79.672	Panthera_pardus
ENSMAUG00000016976	Lsg1	93	80.763	ENSPTIG00000010789	LSG1	91	80.763	Panthera_tigris_altaica
ENSMAUG00000016976	Lsg1	93	80.265	ENSPTRG00000015760	LSG1	91	79.602	Pan_troglodytes
ENSMAUG00000016976	Lsg1	93	81.592	ENSPANG00000018249	LSG1	91	80.100	Papio_anubis
ENSMAUG00000016976	Lsg1	96	60.720	ENSPKIG00000002895	lsg1	97	60.572	Paramormyrops_kingsleyae
ENSMAUG00000016976	Lsg1	88	64.225	ENSPSIG00000009821	LSG1	91	62.437	Pelodiscus_sinensis
ENSMAUG00000016976	Lsg1	87	65.392	ENSPMGG00000000931	lsg1	90	65.392	Periophthalmus_magnuspinnatus
ENSMAUG00000016976	Lsg1	93	90.219	ENSPEMG00000012082	-	91	88.870	Peromyscus_maniculatus_bairdii
ENSMAUG00000016976	Lsg1	96	58.176	ENSPMAG00000007451	lsg1	95	57.547	Petromyzon_marinus
ENSMAUG00000016976	Lsg1	93	68.182	ENSPCIG00000013890	LSG1	76	68.182	Phascolarctos_cinereus
ENSMAUG00000016976	Lsg1	90	66.200	ENSPFOG00000021882	lsg1	91	65.535	Poecilia_formosa
ENSMAUG00000016976	Lsg1	90	66.903	ENSPLAG00000019536	lsg1	91	65.986	Poecilia_latipinna
ENSMAUG00000016976	Lsg1	90	65.445	ENSPMEG00000017281	lsg1	91	64.805	Poecilia_mexicana
ENSMAUG00000016976	Lsg1	90	56.446	ENSPREG00000006048	lsg1	90	56.250	Poecilia_reticulata
ENSMAUG00000016976	Lsg1	93	80.960	ENSPPYG00000014425	LSG1	99	79.636	Pongo_abelii
ENSMAUG00000016976	Lsg1	82	87.013	ENSPCAG00000005511	LSG1	72	87.013	Procavia_capensis
ENSMAUG00000016976	Lsg1	97	79.683	ENSPCOG00000012360	LSG1	96	79.683	Propithecus_coquereli
ENSMAUG00000016976	Lsg1	93	63.167	ENSPNYG00000021994	lsg1	91	61.111	Pundamilia_nyererei
ENSMAUG00000016976	Lsg1	96	63.107	ENSPNAG00000015533	lsg1	94	62.825	Pygocentrus_nattereri
ENSMAUG00000016976	Lsg1	97	84.810	ENSRNOG00000001727	Lsg1	96	84.494	Rattus_norvegicus
ENSMAUG00000016976	Lsg1	93	80.265	ENSRBIG00000029053	LSG1	91	79.768	Rhinopithecus_bieti
ENSMAUG00000016976	Lsg1	93	80.265	ENSRROG00000037702	LSG1	91	79.768	Rhinopithecus_roxellana
ENSMAUG00000016976	Lsg1	83	41.002	YGL099W	LSG1	70	56.886	Saccharomyces_cerevisiae
ENSMAUG00000016976	Lsg1	93	82.090	ENSSBOG00000034938	LSG1	91	81.260	Saimiri_boliviensis_boliviensis
ENSMAUG00000016976	Lsg1	74	63.872	ENSSHAG00000003487	LSG1	96	63.200	Sarcophilus_harrisii
ENSMAUG00000016976	Lsg1	90	63.368	ENSSFOG00015008955	lsg1	91	62.606	Scleropages_formosus
ENSMAUG00000016976	Lsg1	90	64.089	ENSSDUG00000004622	lsg1	91	63.559	Seriola_dumerili
ENSMAUG00000016976	Lsg1	90	64.675	ENSSLDG00000010869	lsg1	91	63.761	Seriola_lalandi_dorsalis
ENSMAUG00000016976	Lsg1	75	79.505	ENSSARG00000012981	LSG1	72	79.505	Sorex_araneus
ENSMAUG00000016976	Lsg1	96	64.184	ENSSPUG00000016347	LSG1	95	64.115	Sphenodon_punctatus
ENSMAUG00000016976	Lsg1	92	64.200	ENSSPAG00000005508	lsg1	90	65.324	Stegastes_partitus
ENSMAUG00000016976	Lsg1	93	80.235	ENSSSCG00000011827	LSG1	91	78.912	Sus_scrofa
ENSMAUG00000016976	Lsg1	87	60.172	ENSTGUG00000009068	LSG1	96	59.760	Taeniopygia_guttata
ENSMAUG00000016976	Lsg1	90	62.433	ENSTRUG00000017380	lsg1	90	61.525	Takifugu_rubripes
ENSMAUG00000016976	Lsg1	90	63.339	ENSTNIG00000015570	lsg1	91	63.776	Tetraodon_nigroviridis
ENSMAUG00000016976	Lsg1	83	81.227	ENSTTRG00000000559	LSG1	82	79.740	Tursiops_truncatus
ENSMAUG00000016976	Lsg1	94	79.672	ENSUAMG00000012454	LSG1	99	79.016	Ursus_americanus
ENSMAUG00000016976	Lsg1	93	80.100	ENSUMAG00000000855	LSG1	91	79.436	Ursus_maritimus
ENSMAUG00000016976	Lsg1	87	74.296	ENSVPAG00000012400	LSG1	91	74.296	Vicugna_pacos
ENSMAUG00000016976	Lsg1	87	80.714	ENSVVUG00000008956	LSG1	91	78.041	Vulpes_vulpes
ENSMAUG00000016976	Lsg1	97	62.440	ENSXETG00000003451	lsg1	97	62.205	Xenopus_tropicalis
ENSMAUG00000016976	Lsg1	90	67.082	ENSXCOG00000003239	lsg1	91	66.897	Xiphophorus_couchianus
ENSMAUG00000016976	Lsg1	90	66.786	ENSXMAG00000005536	lsg1	90	65.685	Xiphophorus_maculatus