EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000017032 (Gene tree)
Gene ID: 101827860
Gene Symbol: Zc3hc1
Alias: 1110054L24Rik|HSPC216|Nipa
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 18277 bases
Position: chrKB708206.1:11213638-11231914
Accession: 101827860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000018469	zf-C3HC	PF07967.13	9.3e-14	1	1
ENSMAUP00000018469	Rsm1	PF08600.10	1e-18	1	2
ENSMAUP00000018469	Rsm1	PF08600.10	1e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000022429	-	1317	XM_005078113	ENSMAUP00000018469	438 (aa)	XP_005078170	-

Gene Model

Click here to download ENSMAUG00000017032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000017032's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000017032	Zc3hc1	91	81.884	ENSG00000091732	ZC3HC1	85	81.884	Homo_sapiens
ENSMAUG00000017032	Zc3hc1	90	41.038	ENSAPOG00000009078	zc3hc1	82	40.566	Acanthochromis_polyacanthus
ENSMAUG00000017032	Zc3hc1	92	80.723	ENSAMEG00000005425	ZC3HC1	81	80.723	Ailuropoda_melanoleuca
ENSMAUG00000017032	Zc3hc1	90	40.662	ENSACIG00000019513	zc3hc1	81	40.189	Amphilophus_citrinellus
ENSMAUG00000017032	Zc3hc1	90	41.509	ENSAOCG00000024310	zc3hc1	82	41.176	Amphiprion_ocellaris
ENSMAUG00000017032	Zc3hc1	90	41.509	ENSAPEG00000004907	zc3hc1	82	41.176	Amphiprion_percula
ENSMAUG00000017032	Zc3hc1	85	42.714	ENSATEG00000016898	zc3hc1	79	42.211	Anabas_testudineus
ENSMAUG00000017032	Zc3hc1	91	54.217	ENSAPLG00000003832	ZC3HC1	91	54.217	Anas_platyrhynchos
ENSMAUG00000017032	Zc3hc1	92	57.412	ENSACAG00000001638	ZC3HC1	82	57.412	Anolis_carolinensis
ENSMAUG00000017032	Zc3hc1	92	81.446	ENSANAG00000022213	ZC3HC1	99	84.878	Aotus_nancymaae
ENSMAUG00000017032	Zc3hc1	90	40.941	ENSACLG00000025033	zc3hc1	89	40.706	Astatotilapia_calliptera
ENSMAUG00000017032	Zc3hc1	90	41.063	ENSAMXG00000036792	zc3hc1	83	41.063	Astyanax_mexicanus
ENSMAUG00000017032	Zc3hc1	92	79.759	ENSBTAG00000011247	ZC3HC1	82	79.759	Bos_taurus
ENSMAUG00000017032	Zc3hc1	92	81.446	ENSCJAG00000010536	ZC3HC1	99	84.878	Callithrix_jacchus
ENSMAUG00000017032	Zc3hc1	92	82.169	ENSCAFG00000029401	-	81	82.169	Canis_familiaris
ENSMAUG00000017032	Zc3hc1	92	82.169	ENSCAFG00000001499	-	80	82.169	Canis_familiaris
ENSMAUG00000017032	Zc3hc1	92	82.169	ENSCAFG00000031850	-	82	82.169	Canis_familiaris
ENSMAUG00000017032	Zc3hc1	92	82.169	ENSCAFG00000028735	-	82	82.169	Canis_familiaris
ENSMAUG00000017032	Zc3hc1	92	82.169	ENSCAFG00020006829	-	82	82.169	Canis_lupus_dingo
ENSMAUG00000017032	Zc3hc1	92	82.169	ENSCAFG00020023333	-	81	82.169	Canis_lupus_dingo
ENSMAUG00000017032	Zc3hc1	92	81.281	ENSCHIG00000014103	ZC3HC1	84	81.281	Capra_hircus
ENSMAUG00000017032	Zc3hc1	92	78.313	ENSTSYG00000002843	ZC3HC1	82	78.313	Carlito_syrichta
ENSMAUG00000017032	Zc3hc1	92	60.688	ENSCAPG00000016300	ZC3HC1	88	63.717	Cavia_aperea
ENSMAUG00000017032	Zc3hc1	92	75.422	ENSCPOG00000014034	ZC3HC1	82	75.422	Cavia_porcellus
ENSMAUG00000017032	Zc3hc1	66	85.616	ENSCCAG00000020384	ZC3HC1	100	86.784	Cebus_capucinus
ENSMAUG00000017032	Zc3hc1	92	81.928	ENSCATG00000023130	ZC3HC1	96	81.081	Cercocebus_atys
ENSMAUG00000017032	Zc3hc1	92	61.194	ENSCLAG00000008260	ZC3HC1	88	58.696	Chinchilla_lanigera
ENSMAUG00000017032	Zc3hc1	84	81.351	ENSCSAG00000009881	ZC3HC1	96	81.351	Chlorocebus_sabaeus
ENSMAUG00000017032	Zc3hc1	91	79.661	ENSCHOG00000011846	ZC3HC1	90	79.661	Choloepus_hoffmanni
ENSMAUG00000017032	Zc3hc1	92	62.350	ENSCPBG00000017519	ZC3HC1	82	62.350	Chrysemys_picta_bellii
ENSMAUG00000017032	Zc3hc1	92	81.928	ENSCANG00000029091	ZC3HC1	99	84.878	Colobus_angolensis_palliatus
ENSMAUG00000017032	Zc3hc1	92	87.198	ENSCGRG00001018805	Zc3hc1	82	87.198	Cricetulus_griseus_chok1gshd
ENSMAUG00000017032	Zc3hc1	92	87.198	ENSCGRG00000017114	Zc3hc1	82	87.198	Cricetulus_griseus_crigri
ENSMAUG00000017032	Zc3hc1	91	40.793	ENSCSEG00000009284	zc3hc1	80	40.326	Cynoglossus_semilaevis
ENSMAUG00000017032	Zc3hc1	90	40.476	ENSCVAG00000011566	zc3hc1	81	40.000	Cyprinodon_variegatus
ENSMAUG00000017032	Zc3hc1	90	44.391	ENSDARG00000062651	zc3hc1	82	43.914	Danio_rerio
ENSMAUG00000017032	Zc3hc1	92	80.723	ENSDNOG00000045016	ZC3HC1	82	80.723	Dasypus_novemcinctus
ENSMAUG00000017032	Zc3hc1	95	74.942	ENSDORG00000008697	Zc3hc1	92	74.942	Dipodomys_ordii
ENSMAUG00000017032	Zc3hc1	93	80.851	ENSEASG00005008789	ZC3HC1	90	80.851	Equus_asinus_asinus
ENSMAUG00000017032	Zc3hc1	92	80.964	ENSECAG00000017886	ZC3HC1	82	80.964	Equus_caballus
ENSMAUG00000017032	Zc3hc1	73	80.247	ENSEEUG00000003123	ZC3HC1	65	80.247	Erinaceus_europaeus
ENSMAUG00000017032	Zc3hc1	90	42.191	ENSELUG00000023168	zc3hc1	82	43.256	Esox_lucius
ENSMAUG00000017032	Zc3hc1	92	80.482	ENSFCAG00000010429	ZC3HC1	87	80.482	Felis_catus
ENSMAUG00000017032	Zc3hc1	92	53.396	ENSFALG00000005006	ZC3HC1	90	53.396	Ficedula_albicollis
ENSMAUG00000017032	Zc3hc1	92	78.072	ENSFDAG00000019897	ZC3HC1	82	78.072	Fukomys_damarensis
ENSMAUG00000017032	Zc3hc1	92	40.698	ENSFHEG00000020149	zc3hc1	83	40.233	Fundulus_heteroclitus
ENSMAUG00000017032	Zc3hc1	90	40.670	ENSGMOG00000002914	zc3hc1	83	40.191	Gadus_morhua
ENSMAUG00000017032	Zc3hc1	91	56.280	ENSGALG00000008003	ZC3HC1	82	56.280	Gallus_gallus
ENSMAUG00000017032	Zc3hc1	92	41.218	ENSGAFG00000016095	zc3hc1	83	40.749	Gambusia_affinis
ENSMAUG00000017032	Zc3hc1	91	41.549	ENSGACG00000019706	zc3hc1	83	41.315	Gasterosteus_aculeatus
ENSMAUG00000017032	Zc3hc1	87	62.155	ENSGAGG00000016106	ZC3HC1	100	62.155	Gopherus_agassizii
ENSMAUG00000017032	Zc3hc1	91	81.643	ENSGGOG00000015504	ZC3HC1	98	85.784	Gorilla_gorilla
ENSMAUG00000017032	Zc3hc1	90	41.176	ENSHBUG00000008347	zc3hc1	82	40.941	Haplochromis_burtoni
ENSMAUG00000017032	Zc3hc1	92	79.518	ENSHGLG00000005085	ZC3HC1	82	79.518	Heterocephalus_glaber_female
ENSMAUG00000017032	Zc3hc1	92	79.277	ENSHGLG00100011395	ZC3HC1	82	79.277	Heterocephalus_glaber_male
ENSMAUG00000017032	Zc3hc1	90	40.767	ENSHCOG00000014309	zc3hc1	81	40.865	Hippocampus_comes
ENSMAUG00000017032	Zc3hc1	92	80.482	ENSSTOG00000023599	-	82	80.482	Ictidomys_tridecemlineatus
ENSMAUG00000017032	Zc3hc1	92	41.570	ENSKMAG00000015315	zc3hc1	78	41.109	Kryptolebias_marmoratus
ENSMAUG00000017032	Zc3hc1	90	41.589	ENSLBEG00000017325	zc3hc1	87	41.121	Labrus_bergylta
ENSMAUG00000017032	Zc3hc1	70	50.769	ENSLACG00000013032	ZC3HC1	77	49.408	Latimeria_chalumnae
ENSMAUG00000017032	Zc3hc1	90	46.411	ENSLOCG00000015963	zc3hc1	82	47.255	Lepisosteus_oculatus
ENSMAUG00000017032	Zc3hc1	92	78.657	ENSLAFG00000001292	ZC3HC1	81	78.657	Loxodonta_africana
ENSMAUG00000017032	Zc3hc1	92	82.169	ENSMFAG00000030176	ZC3HC1	97	81.351	Macaca_fascicularis
ENSMAUG00000017032	Zc3hc1	92	82.169	ENSMMUG00000006155	ZC3HC1	98	81.351	Macaca_mulatta
ENSMAUG00000017032	Zc3hc1	92	82.410	ENSMNEG00000011833	ZC3HC1	100	87.264	Macaca_nemestrina
ENSMAUG00000017032	Zc3hc1	92	82.169	ENSMLEG00000027328	ZC3HC1	99	85.366	Mandrillus_leucophaeus
ENSMAUG00000017032	Zc3hc1	90	41.509	ENSMAMG00000010691	zc3hc1	82	40.888	Mastacembelus_armatus
ENSMAUG00000017032	Zc3hc1	90	40.941	ENSMZEG00005007142	zc3hc1	82	40.706	Maylandia_zebra
ENSMAUG00000017032	Zc3hc1	91	55.904	ENSMGAG00000002977	ZC3HC1	81	56.627	Meleagris_gallopavo
ENSMAUG00000017032	Zc3hc1	92	80.241	ENSMICG00000009167	ZC3HC1	82	80.241	Microcebus_murinus
ENSMAUG00000017032	Zc3hc1	92	85.749	ENSMOCG00000015239	Zc3hc1	82	85.749	Microtus_ochrogaster
ENSMAUG00000017032	Zc3hc1	92	39.120	ENSMMOG00000002204	zc3hc1	94	38.657	Mola_mola
ENSMAUG00000017032	Zc3hc1	80	67.120	ENSMODG00000014630	ZC3HC1	77	67.120	Monodelphis_domestica
ENSMAUG00000017032	Zc3hc1	90	42.280	ENSMALG00000014447	zc3hc1	82	41.647	Monopterus_albus
ENSMAUG00000017032	Zc3hc1	92	83.575	MGP_CAROLIEiJ_G0028183	Zc3hc1	82	83.575	Mus_caroli
ENSMAUG00000017032	Zc3hc1	92	83.816	ENSMUSG00000039130	Zc3hc1	82	83.816	Mus_musculus
ENSMAUG00000017032	Zc3hc1	92	82.544	MGP_PahariEiJ_G0021941	Zc3hc1	81	82.544	Mus_pahari
ENSMAUG00000017032	Zc3hc1	92	83.575	MGP_SPRETEiJ_G0029183	Zc3hc1	82	83.575	Mus_spretus
ENSMAUG00000017032	Zc3hc1	86	79.592	ENSMPUG00000005297	ZC3HC1	77	79.592	Mustela_putorius_furo
ENSMAUG00000017032	Zc3hc1	92	78.365	ENSMLUG00000000063	-	81	78.365	Myotis_lucifugus
ENSMAUG00000017032	Zc3hc1	77	78.363	ENSMLUG00000029228	-	99	78.363	Myotis_lucifugus
ENSMAUG00000017032	Zc3hc1	92	81.928	ENSNGAG00000019014	Zc3hc1	82	81.928	Nannospalax_galili
ENSMAUG00000017032	Zc3hc1	90	40.521	ENSNBRG00000004577	zc3hc1	81	40.284	Neolamprologus_brichardi
ENSMAUG00000017032	Zc3hc1	91	81.159	ENSNLEG00000012698	ZC3HC1	97	80.217	Nomascus_leucogenys
ENSMAUG00000017032	Zc3hc1	92	70.602	ENSMEUG00000011023	ZC3HC1	82	70.602	Notamacropus_eugenii
ENSMAUG00000017032	Zc3hc1	92	75.663	ENSODEG00000014604	ZC3HC1	82	75.663	Octodon_degus
ENSMAUG00000017032	Zc3hc1	90	41.274	ENSONIG00000011644	zc3hc1	82	41.038	Oreochromis_niloticus
ENSMAUG00000017032	Zc3hc1	92	65.550	ENSOANG00000011460	ZC3HC1	90	65.550	Ornithorhynchus_anatinus
ENSMAUG00000017032	Zc3hc1	92	76.386	ENSOCUG00000017137	ZC3HC1	81	76.386	Oryctolagus_cuniculus
ENSMAUG00000017032	Zc3hc1	90	41.487	ENSORLG00000014409	zc3hc1	81	40.767	Oryzias_latipes
ENSMAUG00000017032	Zc3hc1	90	42.005	ENSORLG00020015874	zc3hc1	81	41.289	Oryzias_latipes_hni
ENSMAUG00000017032	Zc3hc1	90	41.007	ENSORLG00015014641	zc3hc1	81	40.288	Oryzias_latipes_hsok
ENSMAUG00000017032	Zc3hc1	90	43.415	ENSOMEG00000000215	zc3hc1	81	42.651	Oryzias_melastigma
ENSMAUG00000017032	Zc3hc1	90	43.415	ENSOMEG00000020604	zc3hc1	82	42.019	Oryzias_melastigma
ENSMAUG00000017032	Zc3hc1	91	75.550	ENSOGAG00000026193	ZC3HC1	81	75.550	Otolemur_garnettii
ENSMAUG00000017032	Zc3hc1	92	80.482	ENSOARG00000004907	ZC3HC1	80	80.482	Ovis_aries
ENSMAUG00000017032	Zc3hc1	91	81.884	ENSPPAG00000043172	ZC3HC1	98	85.784	Pan_paniscus
ENSMAUG00000017032	Zc3hc1	92	79.759	ENSPPRG00000001004	ZC3HC1	87	79.759	Panthera_pardus
ENSMAUG00000017032	Zc3hc1	92	80.241	ENSPTIG00000007823	ZC3HC1	87	80.241	Panthera_tigris_altaica
ENSMAUG00000017032	Zc3hc1	91	81.884	ENSPTRG00000019685	ZC3HC1	98	85.784	Pan_troglodytes
ENSMAUG00000017032	Zc3hc1	92	82.169	ENSPANG00000014229	ZC3HC1	99	85.366	Papio_anubis
ENSMAUG00000017032	Zc3hc1	90	43.826	ENSPKIG00000007172	zc3hc1	81	43.341	Paramormyrops_kingsleyae
ENSMAUG00000017032	Zc3hc1	92	56.501	ENSPSIG00000016646	ZC3HC1	82	56.501	Pelodiscus_sinensis
ENSMAUG00000017032	Zc3hc1	85	39.547	ENSPMGG00000003548	zc3hc1	84	34.644	Periophthalmus_magnuspinnatus
ENSMAUG00000017032	Zc3hc1	92	85.990	ENSPEMG00000000514	Zc3hc1	82	85.990	Peromyscus_maniculatus_bairdii
ENSMAUG00000017032	Zc3hc1	91	70.803	ENSPCIG00000020619	ZC3HC1	100	70.051	Phascolarctos_cinereus
ENSMAUG00000017032	Zc3hc1	92	41.452	ENSPFOG00000003466	zc3hc1	83	41.218	Poecilia_formosa
ENSMAUG00000017032	Zc3hc1	92	40.706	ENSPLAG00000022211	zc3hc1	83	40.471	Poecilia_latipinna
ENSMAUG00000017032	Zc3hc1	92	41.452	ENSPMEG00000001458	zc3hc1	89	41.218	Poecilia_mexicana
ENSMAUG00000017032	Zc3hc1	92	41.218	ENSPREG00000004004	zc3hc1	83	40.749	Poecilia_reticulata
ENSMAUG00000017032	Zc3hc1	91	75.062	ENSPPYG00000017998	ZC3HC1	82	74.519	Pongo_abelii
ENSMAUG00000017032	Zc3hc1	92	75.904	ENSPCAG00000001182	ZC3HC1	89	75.904	Procavia_capensis
ENSMAUG00000017032	Zc3hc1	92	81.841	ENSPCOG00000017354	ZC3HC1	86	81.841	Propithecus_coquereli
ENSMAUG00000017032	Zc3hc1	92	73.494	ENSPVAG00000003195	ZC3HC1	81	73.735	Pteropus_vampyrus
ENSMAUG00000017032	Zc3hc1	90	40.941	ENSPNYG00000020692	zc3hc1	82	40.706	Pundamilia_nyererei
ENSMAUG00000017032	Zc3hc1	90	41.889	ENSPNAG00000020746	zc3hc1	82	41.787	Pygocentrus_nattereri
ENSMAUG00000017032	Zc3hc1	92	82.850	ENSRNOG00000010154	Zc3hc1	81	82.850	Rattus_norvegicus
ENSMAUG00000017032	Zc3hc1	92	81.687	ENSRBIG00000029409	ZC3HC1	100	85.849	Rhinopithecus_bieti
ENSMAUG00000017032	Zc3hc1	92	81.687	ENSRROG00000041831	ZC3HC1	99	84.390	Rhinopithecus_roxellana
ENSMAUG00000017032	Zc3hc1	77	91.111	ENSSBOG00000032787	ZC3HC1	99	85.854	Saimiri_boliviensis_boliviensis
ENSMAUG00000017032	Zc3hc1	92	70.602	ENSSHAG00000002529	ZC3HC1	88	70.602	Sarcophilus_harrisii
ENSMAUG00000017032	Zc3hc1	90	47.356	ENSSFOG00015003667	zc3hc1	78	46.635	Scleropages_formosus
ENSMAUG00000017032	Zc3hc1	91	40.972	ENSSMAG00000000647	zc3hc1	74	40.972	Scophthalmus_maximus
ENSMAUG00000017032	Zc3hc1	90	42.925	ENSSDUG00000004241	zc3hc1	80	42.453	Seriola_dumerili
ENSMAUG00000017032	Zc3hc1	90	42.689	ENSSLDG00000025056	zc3hc1	80	42.217	Seriola_lalandi_dorsalis
ENSMAUG00000017032	Zc3hc1	92	76.098	ENSSARG00000012013	ZC3HC1	82	76.098	Sorex_araneus
ENSMAUG00000017032	Zc3hc1	86	53.015	ENSSPUG00000000778	ZC3HC1	77	53.015	Sphenodon_punctatus
ENSMAUG00000017032	Zc3hc1	90	42.689	ENSSPAG00000020041	zc3hc1	82	42.217	Stegastes_partitus
ENSMAUG00000017032	Zc3hc1	92	79.759	ENSSSCG00000016565	ZC3HC1	100	79.188	Sus_scrofa
ENSMAUG00000017032	Zc3hc1	54	57.563	ENSTGUG00000016262	ZC3HC1	97	57.563	Taeniopygia_guttata
ENSMAUG00000017032	Zc3hc1	93	40.559	ENSTRUG00000020077	zc3hc1	84	40.326	Takifugu_rubripes
ENSMAUG00000017032	Zc3hc1	97	40.135	ENSTNIG00000007585	zc3hc1	91	39.910	Tetraodon_nigroviridis
ENSMAUG00000017032	Zc3hc1	84	78.862	ENSTBEG00000005216	ZC3HC1	72	78.862	Tupaia_belangeri
ENSMAUG00000017032	Zc3hc1	93	78.538	ENSTTRG00000008458	ZC3HC1	87	78.538	Tursiops_truncatus
ENSMAUG00000017032	Zc3hc1	92	81.446	ENSUAMG00000020249	ZC3HC1	82	81.446	Ursus_americanus
ENSMAUG00000017032	Zc3hc1	92	81.205	ENSUMAG00000009268	ZC3HC1	82	81.205	Ursus_maritimus
ENSMAUG00000017032	Zc3hc1	66	85.714	ENSVPAG00000010846	ZC3HC1	59	85.714	Vicugna_pacos
ENSMAUG00000017032	Zc3hc1	87	80.662	ENSVVUG00000012386	ZC3HC1	80	80.662	Vulpes_vulpes
ENSMAUG00000017032	Zc3hc1	86	48.731	ENSXETG00000033900	zc3hc1	79	48.731	Xenopus_tropicalis
ENSMAUG00000017032	Zc3hc1	93	40.509	ENSXCOG00000013570	zc3hc1	87	37.561	Xiphophorus_couchianus
ENSMAUG00000017032	Zc3hc1	92	41.080	ENSXMAG00000010979	zc3hc1	89	40.610	Xiphophorus_maculatus