EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000017537 (Gene tree)
Gene ID: 101822934
Gene Symbol: Pop1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 25843 bases
Position: chrKB708161.1:16256676-16282518
Accession: 101822934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000019193	POP1	PF06978.11	9.5e-39	1	2
ENSMAUP00000019193	POP1	PF06978.11	9.5e-39	2	2
ENSMAUP00000019196	POP1	PF06978.11	1.1e-38	1	2
ENSMAUP00000019196	POP1	PF06978.11	1.1e-38	2	2
ENSMAUP00000019193	POPLD	PF08170.12	1.5e-26	1	1
ENSMAUP00000019196	POPLD	PF08170.12	1.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000023165	-	3744	XM_005072653	ENSMAUP00000019193	1006 (aa)	XP_005072710	A0A1U7QQU0
ENSMAUT00000023168	-	3111	-	ENSMAUP00000019196	1036 (aa)	-	UPI0003592836

Gene Model

Click here to download ENSMAUG00000017537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000017537's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000017537	Pop1	100	76.878	ENSG00000104356	POP1	100	84.699	Homo_sapiens
ENSMAUG00000017537	Pop1	100	47.378	ENSAPOG00000008198	pop1	100	47.283	Acanthochromis_polyacanthus
ENSMAUG00000017537	Pop1	100	73.823	ENSAMEG00000000556	POP1	100	73.823	Ailuropoda_melanoleuca
ENSMAUG00000017537	Pop1	100	46.273	ENSACIG00000004169	POP1	100	46.273	Amphilophus_citrinellus
ENSMAUG00000017537	Pop1	100	46.806	ENSAOCG00000010991	pop1	100	47.104	Amphiprion_ocellaris
ENSMAUG00000017537	Pop1	91	46.105	ENSAPEG00000007607	pop1	96	46.960	Amphiprion_percula
ENSMAUG00000017537	Pop1	100	45.420	ENSATEG00000024814	POP1	100	46.088	Anabas_testudineus
ENSMAUG00000017537	Pop1	92	61.352	ENSAPLG00000014418	POP1	99	61.352	Anas_platyrhynchos
ENSMAUG00000017537	Pop1	100	56.074	ENSACAG00000016083	POP1	100	56.019	Anolis_carolinensis
ENSMAUG00000017537	Pop1	88	86.012	ENSANAG00000026360	POP1	99	86.012	Aotus_nancymaae
ENSMAUG00000017537	Pop1	100	47.177	ENSACLG00000010951	pop1	100	47.560	Astatotilapia_calliptera
ENSMAUG00000017537	Pop1	100	46.211	ENSAMXG00000014483	POP1	100	46.211	Astyanax_mexicanus
ENSMAUG00000017537	Pop1	100	72.380	ENSBTAG00000012596	POP1	100	72.870	Bos_taurus
ENSMAUG00000017537	Pop1	100	75.512	ENSCJAG00000015567	POP1	100	75.512	Callithrix_jacchus
ENSMAUG00000017537	Pop1	100	74.063	ENSCAFG00000000469	POP1	100	74.063	Canis_familiaris
ENSMAUG00000017537	Pop1	100	73.951	ENSCAFG00020026765	POP1	100	73.951	Canis_lupus_dingo
ENSMAUG00000017537	Pop1	100	72.896	ENSCHIG00000017066	POP1	100	73.190	Capra_hircus
ENSMAUG00000017537	Pop1	100	74.732	ENSTSYG00000003097	POP1	100	74.927	Carlito_syrichta
ENSMAUG00000017537	Pop1	100	73.438	ENSCAPG00000007251	POP1	100	73.463	Cavia_aperea
ENSMAUG00000017537	Pop1	100	75.859	ENSCPOG00000002901	POP1	100	75.859	Cavia_porcellus
ENSMAUG00000017537	Pop1	100	75.536	ENSCCAG00000018939	POP1	94	81.744	Cebus_capucinus
ENSMAUG00000017537	Pop1	100	76.293	ENSCATG00000040916	POP1	100	76.293	Cercocebus_atys
ENSMAUG00000017537	Pop1	100	76.027	ENSCLAG00000007208	POP1	97	76.517	Chinchilla_lanigera
ENSMAUG00000017537	Pop1	90	76.598	ENSCSAG00000012340	POP1	99	76.598	Chlorocebus_sabaeus
ENSMAUG00000017537	Pop1	88	79.493	ENSCHOG00000011432	POP1	96	79.493	Choloepus_hoffmanni
ENSMAUG00000017537	Pop1	100	63.875	ENSCPBG00000006373	POP1	100	63.875	Chrysemys_picta_bellii
ENSMAUG00000017537	Pop1	82	36.576	ENSCING00000008323	-	88	36.576	Ciona_intestinalis
ENSMAUG00000017537	Pop1	100	76.683	ENSCANG00000001647	POP1	100	76.683	Colobus_angolensis_palliatus
ENSMAUG00000017537	Pop1	100	90.396	ENSCGRG00001017308	Pop1	100	90.891	Cricetulus_griseus_chok1gshd
ENSMAUG00000017537	Pop1	100	83.960	ENSCGRG00000010824	Pop1	100	84.455	Cricetulus_griseus_crigri
ENSMAUG00000017537	Pop1	100	45.149	ENSCSEG00000008737	POP1	100	44.957	Cynoglossus_semilaevis
ENSMAUG00000017537	Pop1	100	46.405	ENSCVAG00000022248	pop1	100	46.405	Cyprinodon_variegatus
ENSMAUG00000017537	Pop1	100	73.044	ENSDNOG00000019974	POP1	100	73.044	Dasypus_novemcinctus
ENSMAUG00000017537	Pop1	100	68.251	ENSDORG00000015384	Pop1	100	68.156	Dipodomys_ordii
ENSMAUG00000017537	Pop1	62	34.694	FBgn0026702	l(1)G0045	71	34.669	Drosophila_melanogaster
ENSMAUG00000017537	Pop1	88	68.246	ENSETEG00000007839	POP1	88	68.246	Echinops_telfairi
ENSMAUG00000017537	Pop1	100	75.220	ENSEASG00005003189	POP1	98	75.805	Equus_asinus_asinus
ENSMAUG00000017537	Pop1	100	75.365	ENSECAG00000024236	POP1	100	75.415	Equus_caballus
ENSMAUG00000017537	Pop1	66	67.763	ENSEEUG00000003050	-	70	67.763	Erinaceus_europaeus
ENSMAUG00000017537	Pop1	100	46.050	ENSELUG00000003526	pop1	100	47.047	Esox_lucius
ENSMAUG00000017537	Pop1	100	75.122	ENSFCAG00000002168	POP1	100	75.707	Felis_catus
ENSMAUG00000017537	Pop1	100	58.544	ENSFALG00000005711	POP1	100	58.641	Ficedula_albicollis
ENSMAUG00000017537	Pop1	100	75.367	ENSFDAG00000017068	POP1	100	75.855	Fukomys_damarensis
ENSMAUG00000017537	Pop1	100	46.191	ENSFHEG00000019518	pop1	100	46.577	Fundulus_heteroclitus
ENSMAUG00000017537	Pop1	92	46.058	ENSGMOG00000000659	POP1	97	46.162	Gadus_morhua
ENSMAUG00000017537	Pop1	100	46.732	ENSGAFG00000019770	POP1	100	46.732	Gambusia_affinis
ENSMAUG00000017537	Pop1	100	44.317	ENSGACG00000003499	pop1	100	44.317	Gasterosteus_aculeatus
ENSMAUG00000017537	Pop1	100	62.341	ENSGAGG00000011737	POP1	98	62.341	Gopherus_agassizii
ENSMAUG00000017537	Pop1	100	76.683	ENSGGOG00000003176	POP1	100	76.683	Gorilla_gorilla
ENSMAUG00000017537	Pop1	100	47.368	ENSHBUG00000021583	pop1	100	47.464	Haplochromis_burtoni
ENSMAUG00000017537	Pop1	100	75.657	ENSHGLG00000006029	POP1	100	75.657	Heterocephalus_glaber_female
ENSMAUG00000017537	Pop1	100	75.657	ENSHGLG00100016879	POP1	100	75.657	Heterocephalus_glaber_male
ENSMAUG00000017537	Pop1	90	48.456	ENSHCOG00000013888	pop1	96	48.456	Hippocampus_comes
ENSMAUG00000017537	Pop1	99	45.648	ENSIPUG00000018336	pop1	99	45.648	Ictalurus_punctatus
ENSMAUG00000017537	Pop1	100	78.082	ENSSTOG00000011455	POP1	97	78.082	Ictidomys_tridecemlineatus
ENSMAUG00000017537	Pop1	100	73.892	ENSJJAG00000013325	Pop1	100	74.286	Jaculus_jaculus
ENSMAUG00000017537	Pop1	100	46.647	ENSKMAG00000001346	POP1	100	46.647	Kryptolebias_marmoratus
ENSMAUG00000017537	Pop1	89	48.253	ENSLBEG00000024457	POP1	95	48.180	Labrus_bergylta
ENSMAUG00000017537	Pop1	93	55.759	ENSLACG00000012498	POP1	100	56.065	Latimeria_chalumnae
ENSMAUG00000017537	Pop1	100	50.921	ENSLOCG00000009817	POP1	100	51.841	Lepisosteus_oculatus
ENSMAUG00000017537	Pop1	100	75.402	ENSLAFG00000010770	POP1	100	75.402	Loxodonta_africana
ENSMAUG00000017537	Pop1	100	76.390	ENSMFAG00000000347	POP1	100	76.390	Macaca_fascicularis
ENSMAUG00000017537	Pop1	100	76.195	ENSMNEG00000036870	POP1	100	76.195	Macaca_nemestrina
ENSMAUG00000017537	Pop1	100	76.293	ENSMLEG00000034986	POP1	100	76.293	Mandrillus_leucophaeus
ENSMAUG00000017537	Pop1	100	45.646	ENSMAMG00000004040	pop1	100	45.802	Mastacembelus_armatus
ENSMAUG00000017537	Pop1	100	47.464	ENSMZEG00005025448	pop1	100	47.560	Maylandia_zebra
ENSMAUG00000017537	Pop1	100	57.920	ENSMGAG00000012167	POP1	100	58.341	Meleagris_gallopavo
ENSMAUG00000017537	Pop1	100	76.195	ENSMICG00000004361	POP1	100	76.195	Microcebus_murinus
ENSMAUG00000017537	Pop1	100	84.417	ENSMOCG00000006356	Pop1	100	85.086	Microtus_ochrogaster
ENSMAUG00000017537	Pop1	100	43.389	ENSMMOG00000018242	pop1	100	43.487	Mola_mola
ENSMAUG00000017537	Pop1	100	64.113	ENSMODG00000006561	POP1	100	64.113	Monodelphis_domestica
ENSMAUG00000017537	Pop1	100	46.827	ENSMALG00000012621	POP1	100	47.070	Monopterus_albus
ENSMAUG00000017537	Pop1	100	83.095	MGP_CAROLIEiJ_G0019726	Pop1	100	83.381	Mus_caroli
ENSMAUG00000017537	Pop1	100	83.095	ENSMUSG00000022325	Pop1	100	83.397	Mus_musculus
ENSMAUG00000017537	Pop1	100	83.238	MGP_PahariEiJ_G0019735	Pop1	100	83.531	Mus_pahari
ENSMAUG00000017537	Pop1	100	82.904	MGP_SPRETEiJ_G0020622	Pop1	100	83.190	Mus_spretus
ENSMAUG00000017537	Pop1	100	73.955	ENSMPUG00000015250	POP1	100	73.955	Mustela_putorius_furo
ENSMAUG00000017537	Pop1	100	71.012	ENSMLUG00000010204	POP1	100	71.012	Myotis_lucifugus
ENSMAUG00000017537	Pop1	100	80.784	ENSNGAG00000001582	Pop1	100	81.176	Nannospalax_galili
ENSMAUG00000017537	Pop1	89	48.096	ENSNBRG00000002356	pop1	94	48.280	Neolamprologus_brichardi
ENSMAUG00000017537	Pop1	100	76.511	ENSNLEG00000002541	POP1	100	76.511	Nomascus_leucogenys
ENSMAUG00000017537	Pop1	93	57.348	ENSMEUG00000003118	POP1	98	57.348	Notamacropus_eugenii
ENSMAUG00000017537	Pop1	100	71.984	ENSOPRG00000007667	POP1	100	71.984	Ochotona_princeps
ENSMAUG00000017537	Pop1	100	74.121	ENSODEG00000003984	POP1	100	74.609	Octodon_degus
ENSMAUG00000017537	Pop1	100	47.943	ENSONIG00000016445	pop1	100	48.038	Oreochromis_niloticus
ENSMAUG00000017537	Pop1	62	69.512	ENSOANG00000001278	-	94	69.512	Ornithorhynchus_anatinus
ENSMAUG00000017537	Pop1	100	73.107	ENSOCUG00000017400	POP1	100	73.107	Oryctolagus_cuniculus
ENSMAUG00000017537	Pop1	92	48.677	ENSORLG00000002839	pop1	100	46.881	Oryzias_latipes
ENSMAUG00000017537	Pop1	91	47.919	ENSORLG00020022450	POP1	98	48.085	Oryzias_latipes_hni
ENSMAUG00000017537	Pop1	92	49.364	ENSORLG00015012746	POP1	100	47.225	Oryzias_latipes_hsok
ENSMAUG00000017537	Pop1	100	46.706	ENSOMEG00000006915	pop1	99	46.660	Oryzias_melastigma
ENSMAUG00000017537	Pop1	100	73.730	ENSOGAG00000001466	POP1	100	73.730	Otolemur_garnettii
ENSMAUG00000017537	Pop1	100	76.780	ENSPPAG00000018410	POP1	100	76.780	Pan_paniscus
ENSMAUG00000017537	Pop1	100	75.244	ENSPPRG00000005002	POP1	100	75.731	Panthera_pardus
ENSMAUG00000017537	Pop1	100	75.244	ENSPTIG00000016527	POP1	100	75.828	Panthera_tigris_altaica
ENSMAUG00000017537	Pop1	100	76.878	ENSPTRG00000020458	POP1	100	76.878	Pan_troglodytes
ENSMAUG00000017537	Pop1	100	76.390	ENSPANG00000009704	POP1	100	76.390	Papio_anubis
ENSMAUG00000017537	Pop1	100	49.611	ENSPKIG00000016325	POP1	100	49.611	Paramormyrops_kingsleyae
ENSMAUG00000017537	Pop1	100	62.027	ENSPSIG00000012343	POP1	100	62.027	Pelodiscus_sinensis
ENSMAUG00000017537	Pop1	90	48.684	ENSPMGG00000022253	POP1	95	48.602	Periophthalmus_magnuspinnatus
ENSMAUG00000017537	Pop1	99	85.578	ENSPEMG00000023633	Pop1	100	85.960	Peromyscus_maniculatus_bairdii
ENSMAUG00000017537	Pop1	90	44.315	ENSPMAG00000003209	POP1	100	44.315	Petromyzon_marinus
ENSMAUG00000017537	Pop1	100	63.265	ENSPCIG00000012216	POP1	100	63.883	Phascolarctos_cinereus
ENSMAUG00000017537	Pop1	100	46.842	ENSPFOG00000012490	POP1	100	46.842	Poecilia_formosa
ENSMAUG00000017537	Pop1	100	46.744	ENSPLAG00000004646	POP1	100	46.744	Poecilia_latipinna
ENSMAUG00000017537	Pop1	100	46.842	ENSPMEG00000019592	POP1	100	46.842	Poecilia_mexicana
ENSMAUG00000017537	Pop1	100	47.133	ENSPREG00000020951	POP1	100	47.013	Poecilia_reticulata
ENSMAUG00000017537	Pop1	100	76.511	ENSPPYG00000018777	POP1	100	76.511	Pongo_abelii
ENSMAUG00000017537	Pop1	100	70.020	ENSPCAG00000016662	POP1	100	70.020	Procavia_capensis
ENSMAUG00000017537	Pop1	100	76.488	ENSPCOG00000019420	POP1	100	76.488	Propithecus_coquereli
ENSMAUG00000017537	Pop1	100	74.172	ENSPVAG00000014468	POP1	100	74.854	Pteropus_vampyrus
ENSMAUG00000017537	Pop1	89	48.468	ENSPNYG00000004476	pop1	98	47.817	Pundamilia_nyererei
ENSMAUG00000017537	Pop1	100	45.200	ENSPNAG00000000265	pop1	100	43.470	Pygocentrus_nattereri
ENSMAUG00000017537	Pop1	100	83.572	ENSRNOG00000005243	Pop1	100	83.859	Rattus_norvegicus
ENSMAUG00000017537	Pop1	100	76.488	ENSRBIG00000007996	POP1	100	76.488	Rhinopithecus_bieti
ENSMAUG00000017537	Pop1	100	76.488	ENSRROG00000012334	POP1	100	76.488	Rhinopithecus_roxellana
ENSMAUG00000017537	Pop1	99	76.209	ENSSBOG00000020830	POP1	100	76.209	Saimiri_boliviensis_boliviensis
ENSMAUG00000017537	Pop1	100	63.891	ENSSHAG00000000296	POP1	100	63.891	Sarcophilus_harrisii
ENSMAUG00000017537	Pop1	100	48.882	ENSSFOG00015007429	pop1	99	48.882	Scleropages_formosus
ENSMAUG00000017537	Pop1	87	51.227	ENSSMAG00000010467	POP1	98	46.973	Scophthalmus_maximus
ENSMAUG00000017537	Pop1	100	46.190	ENSSDUG00000007817	POP1	100	46.000	Seriola_dumerili
ENSMAUG00000017537	Pop1	100	46.044	ENSSLDG00000012565	POP1	100	46.476	Seriola_lalandi_dorsalis
ENSMAUG00000017537	Pop1	100	57.308	ENSSPUG00000003550	-	100	57.445	Sphenodon_punctatus
ENSMAUG00000017537	Pop1	90	49.125	ENSSPAG00000014955	pop1	94	49.182	Stegastes_partitus
ENSMAUG00000017537	Pop1	100	75.344	ENSSSCG00000006078	POP1	100	75.344	Sus_scrofa
ENSMAUG00000017537	Pop1	92	54.947	ENSTGUG00000012011	-	100	55.216	Taeniopygia_guttata
ENSMAUG00000017537	Pop1	89	47.530	ENSTRUG00000010856	pop1	92	47.530	Takifugu_rubripes
ENSMAUG00000017537	Pop1	93	47.222	ENSTNIG00000013297	pop1	100	47.222	Tetraodon_nigroviridis
ENSMAUG00000017537	Pop1	95	72.513	ENSTBEG00000014214	POP1	99	72.513	Tupaia_belangeri
ENSMAUG00000017537	Pop1	100	72.780	ENSTTRG00000016071	POP1	100	72.878	Tursiops_truncatus
ENSMAUG00000017537	Pop1	99	72.217	ENSUAMG00000017309	POP1	100	72.217	Ursus_americanus
ENSMAUG00000017537	Pop1	91	85.425	ENSUMAG00000016952	POP1	100	85.425	Ursus_maritimus
ENSMAUG00000017537	Pop1	83	83.577	ENSVPAG00000008278	POP1	82	83.577	Vicugna_pacos
ENSMAUG00000017537	Pop1	100	74.049	ENSVVUG00000010994	POP1	100	74.049	Vulpes_vulpes
ENSMAUG00000017537	Pop1	100	42.150	ENSXCOG00000017043	POP1	100	42.486	Xiphophorus_couchianus
ENSMAUG00000017537	Pop1	100	46.473	ENSXMAG00000002472	POP1	100	46.473	Xiphophorus_maculatus