EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000017948 (Gene tree)
Gene ID: 101833611
Gene Symbol: -
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 17116 bases
Position: chrKB708210.1:9101760-9118875
Accession: 101833611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000019738	RRM_1	PF00076.22	1.1e-29	1	3
ENSMAUP00000019738	RRM_1	PF00076.22	1.1e-29	2	3
ENSMAUP00000019738	RRM_1	PF00076.22	1.1e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000023719	-	3613	XM_005078560	ENSMAUP00000019738	744 (aa)	XP_005078617	UPI000359EBB1

Gene Model

Click here to download ENSMAUG00000017948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000017948's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000017948	-	50	49.626	ENSMAUG00000004248	Raver2	60	50.620

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000017948	-	100	88.441	ENSG00000161847	RAVER1	100	88.306	Homo_sapiens
ENSMAUG00000017948	-	78	58.235	ENSAPOG00000017267	raver1	72	57.283	Acanthochromis_polyacanthus
ENSMAUG00000017948	-	100	88.172	ENSAMEG00000011738	RAVER1	98	88.306	Ailuropoda_melanoleuca
ENSMAUG00000017948	-	78	58.228	ENSAOCG00000005128	raver1	77	57.367	Amphiprion_ocellaris
ENSMAUG00000017948	-	78	62.338	ENSAPEG00000010854	raver1	83	62.338	Amphiprion_percula
ENSMAUG00000017948	-	97	50.611	ENSATEG00000021004	raver1	81	56.757	Anabas_testudineus
ENSMAUG00000017948	-	84	60.062	ENSACAG00000008386	-	91	59.970	Anolis_carolinensis
ENSMAUG00000017948	-	100	88.710	ENSANAG00000028226	RAVER1	98	88.844	Aotus_nancymaae
ENSMAUG00000017948	-	74	87.500	ENSACLG00000018492	raver1	76	87.500	Astatotilapia_calliptera
ENSMAUG00000017948	-	76	80.000	ENSAMXG00000005132	raver1	81	75.000	Astyanax_mexicanus
ENSMAUG00000017948	-	100	87.500	ENSBTAG00000015721	RAVER1	97	91.791	Bos_taurus
ENSMAUG00000017948	-	100	88.710	ENSCJAG00000005671	RAVER1	98	88.844	Callithrix_jacchus
ENSMAUG00000017948	-	100	87.366	ENSCAFG00000017861	RAVER1	98	88.038	Canis_familiaris
ENSMAUG00000017948	-	100	87.366	ENSCAFG00020024449	RAVER1	100	88.038	Canis_lupus_dingo
ENSMAUG00000017948	-	100	86.962	ENSCHIG00000006718	RAVER1	100	87.231	Capra_hircus
ENSMAUG00000017948	-	91	83.088	ENSTSYG00000027107	RAVER1	100	82.941	Carlito_syrichta
ENSMAUG00000017948	-	90	86.885	ENSCAPG00000002269	RAVER1	100	88.077	Cavia_aperea
ENSMAUG00000017948	-	100	89.247	ENSCPOG00000001008	RAVER1	100	90.457	Cavia_porcellus
ENSMAUG00000017948	-	100	88.306	ENSCCAG00000031723	RAVER1	98	88.575	Cebus_capucinus
ENSMAUG00000017948	-	100	88.710	ENSCATG00000043863	RAVER1	98	88.978	Cercocebus_atys
ENSMAUG00000017948	-	100	90.067	ENSCLAG00000009336	RAVER1	100	90.201	Chinchilla_lanigera
ENSMAUG00000017948	-	100	88.844	ENSCSAG00000007317	RAVER1	84	89.113	Chlorocebus_sabaeus
ENSMAUG00000017948	-	96	62.003	ENSCPBG00000005349	-	96	61.183	Chrysemys_picta_bellii
ENSMAUG00000017948	-	100	88.978	ENSCANG00000008337	RAVER1	98	89.247	Colobus_angolensis_palliatus
ENSMAUG00000017948	-	100	97.849	ENSCGRG00001013260	-	100	97.849	Cricetulus_griseus_chok1gshd
ENSMAUG00000017948	-	100	97.849	ENSCGRG00000015138	-	100	97.849	Cricetulus_griseus_crigri
ENSMAUG00000017948	-	74	80.769	ENSCSEG00000021092	raver1	76	80.769	Cynoglossus_semilaevis
ENSMAUG00000017948	-	83	61.616	ENSCVAG00000013971	raver1	81	61.616	Cyprinodon_variegatus
ENSMAUG00000017948	-	100	81.209	ENSDORG00000010106	-	100	79.632	Dipodomys_ordii
ENSMAUG00000017948	-	58	87.817	ENSETEG00000008201	-	74	86.935	Echinops_telfairi
ENSMAUG00000017948	-	65	92.346	ENSEASG00005010544	-	93	88.276	Equus_asinus_asinus
ENSMAUG00000017948	-	100	90.188	ENSECAG00000024966	RAVER1	98	90.323	Equus_caballus
ENSMAUG00000017948	-	98	52.227	ENSELUG00000023287	raver1	91	52.083	Esox_lucius
ENSMAUG00000017948	-	100	89.516	ENSFCAG00000009435	RAVER1	98	89.651	Felis_catus
ENSMAUG00000017948	-	100	89.128	ENSFDAG00000015113	RAVER1	100	89.664	Fukomys_damarensis
ENSMAUG00000017948	-	81	60.825	ENSGMOG00000003649	raver1	81	60.825	Gadus_morhua
ENSMAUG00000017948	-	66	44.711	ENSGALG00000050608	-	66	39.713	Gallus_gallus
ENSMAUG00000017948	-	99	50.066	ENSGACG00000013818	raver1	97	50.408	Gasterosteus_aculeatus
ENSMAUG00000017948	-	96	63.249	ENSGAGG00000011748	-	96	76.676	Gopherus_agassizii
ENSMAUG00000017948	-	100	88.172	ENSGGOG00000006015	RAVER1	98	88.038	Gorilla_gorilla
ENSMAUG00000017948	-	74	84.314	ENSHBUG00000021210	raver1	76	84.314	Haplochromis_burtoni
ENSMAUG00000017948	-	100	89.664	ENSHGLG00000015460	RAVER1	100	89.799	Heterocephalus_glaber_female
ENSMAUG00000017948	-	100	89.664	ENSHGLG00100000812	RAVER1	100	89.799	Heterocephalus_glaber_male
ENSMAUG00000017948	-	98	52.103	ENSIPUG00000013153	raver1	81	60.784	Ictalurus_punctatus
ENSMAUG00000017948	-	100	90.860	ENSSTOG00000003241	RAVER1	100	90.323	Ictidomys_tridecemlineatus
ENSMAUG00000017948	-	100	90.872	ENSJJAG00000018219	-	100	90.738	Jaculus_jaculus
ENSMAUG00000017948	-	97	50.474	ENSKMAG00000017355	raver1	79	57.692	Kryptolebias_marmoratus
ENSMAUG00000017948	-	68	58.218	ENSLBEG00000008268	raver1	68	57.624	Labrus_bergylta
ENSMAUG00000017948	-	90	60.714	ENSLACG00000005809	-	99	60.826	Latimeria_chalumnae
ENSMAUG00000017948	-	96	56.091	ENSLOCG00000007500	raver1	92	55.645	Lepisosteus_oculatus
ENSMAUG00000017948	-	100	88.188	ENSLAFG00000003664	-	100	88.322	Loxodonta_africana
ENSMAUG00000017948	-	100	88.306	ENSMFAG00000037977	RAVER1	98	88.575	Macaca_fascicularis
ENSMAUG00000017948	-	100	88.575	ENSMMUG00000014897	RAVER1	98	88.844	Macaca_mulatta
ENSMAUG00000017948	-	100	88.575	ENSMNEG00000028390	RAVER1	98	88.844	Macaca_nemestrina
ENSMAUG00000017948	-	100	88.575	ENSMLEG00000041959	RAVER1	98	88.844	Mandrillus_leucophaeus
ENSMAUG00000017948	-	74	79.245	ENSMAMG00000012059	raver1	80	57.407	Mastacembelus_armatus
ENSMAUG00000017948	-	74	87.500	ENSMZEG00005019002	raver1	76	87.500	Maylandia_zebra
ENSMAUG00000017948	-	99	87.618	ENSMICG00000010326	RAVER1	99	87.752	Microcebus_murinus
ENSMAUG00000017948	-	100	96.640	ENSMOCG00000015553	-	100	96.640	Microtus_ochrogaster
ENSMAUG00000017948	-	99	49.799	ENSMMOG00000012093	raver1	75	87.500	Mola_mola
ENSMAUG00000017948	-	97	74.518	ENSMODG00000005584	-	89	73.967	Monodelphis_domestica
ENSMAUG00000017948	-	82	57.364	ENSMALG00000016569	raver1	80	56.863	Monopterus_albus
ENSMAUG00000017948	-	100	94.786	MGP_CAROLIEiJ_G0031860	-	100	94.920	Mus_caroli
ENSMAUG00000017948	-	100	95.053	ENSMUSG00000010205	Raver1	100	95.187	Mus_musculus
ENSMAUG00000017948	-	100	93.750	MGP_PahariEiJ_G0014726	-	100	94.814	Mus_pahari
ENSMAUG00000017948	-	100	94.920	MGP_SPRETEiJ_G0032984	-	100	95.053	Mus_spretus
ENSMAUG00000017948	-	100	88.978	ENSMPUG00000006712	RAVER1	98	89.113	Mustela_putorius_furo
ENSMAUG00000017948	-	100	86.290	ENSMLUG00000012328	RAVER1	100	86.828	Myotis_lucifugus
ENSMAUG00000017948	-	100	91.141	ENSNGAG00000001260	-	100	91.141	Nannospalax_galili
ENSMAUG00000017948	-	78	65.000	ENSNBRG00000010139	raver1	78	58.586	Neolamprologus_brichardi
ENSMAUG00000017948	-	100	88.306	ENSNLEG00000012181	RAVER1	98	88.575	Nomascus_leucogenys
ENSMAUG00000017948	-	90	73.746	ENSMEUG00000003281	-	100	72.714	Notamacropus_eugenii
ENSMAUG00000017948	-	51	84.375	ENSOPRG00000005855	-	51	84.375	Ochotona_princeps
ENSMAUG00000017948	-	100	89.262	ENSODEG00000016260	RAVER1	100	89.396	Octodon_degus
ENSMAUG00000017948	-	78	63.750	ENSONIG00000001559	raver1	99	50.887	Oreochromis_niloticus
ENSMAUG00000017948	-	100	82.527	ENSOCUG00000020918	RAVER1	100	81.183	Oryctolagus_cuniculus
ENSMAUG00000017948	-	70	62.645	ENSORLG00000005458	raver1	67	66.583	Oryzias_latipes
ENSMAUG00000017948	-	70	62.413	ENSORLG00020004392	raver1	67	66.332	Oryzias_latipes_hni
ENSMAUG00000017948	-	70	62.181	ENSORLG00015017222	raver1	67	66.080	Oryzias_latipes_hsok
ENSMAUG00000017948	-	75	83.673	ENSOMEG00000023956	raver1	67	83.673	Oryzias_melastigma
ENSMAUG00000017948	-	100	88.441	ENSOGAG00000011071	RAVER1	98	88.172	Otolemur_garnettii
ENSMAUG00000017948	-	100	85.215	ENSOARG00000015886	RAVER1	98	85.215	Ovis_aries
ENSMAUG00000017948	-	100	88.441	ENSPPAG00000002611	RAVER1	98	88.306	Pan_paniscus
ENSMAUG00000017948	-	100	89.919	ENSPPRG00000009912	RAVER1	98	90.054	Panthera_pardus
ENSMAUG00000017948	-	100	88.441	ENSPTRG00000010466	RAVER1	98	88.306	Pan_troglodytes
ENSMAUG00000017948	-	100	88.575	ENSPANG00000004122	RAVER1	98	88.844	Papio_anubis
ENSMAUG00000017948	-	100	97.181	ENSPEMG00000016411	-	100	97.181	Peromyscus_maniculatus_bairdii
ENSMAUG00000017948	-	100	76.032	ENSPCIG00000018695	-	100	74.700	Phascolarctos_cinereus
ENSMAUG00000017948	-	83	55.597	ENSPLAG00000020793	raver1	79	56.890	Poecilia_latipinna
ENSMAUG00000017948	-	90	63.527	ENSPMEG00000011220	raver1	91	50.833	Poecilia_mexicana
ENSMAUG00000017948	-	74	90.698	ENSPREG00000006864	raver1	77	90.698	Poecilia_reticulata
ENSMAUG00000017948	-	100	87.500	ENSPPYG00000010514	RAVER1	84	87.769	Pongo_abelii
ENSMAUG00000017948	-	100	88.874	ENSPCOG00000026605	RAVER1	98	89.276	Propithecus_coquereli
ENSMAUG00000017948	-	100	88.172	ENSPVAG00000003689	RAVER1	100	88.306	Pteropus_vampyrus
ENSMAUG00000017948	-	64	84.314	ENSPNYG00000013284	raver1	65	84.314	Pundamilia_nyererei
ENSMAUG00000017948	-	96	52.049	ENSPNAG00000015476	raver1	91	52.270	Pygocentrus_nattereri
ENSMAUG00000017948	-	100	95.588	ENSRNOG00000020710	Raver1	100	95.588	Rattus_norvegicus
ENSMAUG00000017948	-	100	88.710	ENSRBIG00000034702	RAVER1	98	88.844	Rhinopithecus_bieti
ENSMAUG00000017948	-	100	86.828	ENSRROG00000031186	RAVER1	98	86.559	Rhinopithecus_roxellana
ENSMAUG00000017948	-	100	86.290	ENSSBOG00000023423	RAVER1	98	85.753	Saimiri_boliviensis_boliviensis
ENSMAUG00000017948	-	90	75.110	ENSSHAG00000008181	-	90	74.374	Sarcophilus_harrisii
ENSMAUG00000017948	-	82	54.664	ENSSDUG00000021063	raver1	84	55.577	Seriola_dumerili
ENSMAUG00000017948	-	68	58.090	ENSSLDG00000014505	raver1	66	58.103	Seriola_lalandi_dorsalis
ENSMAUG00000017948	-	79	61.905	ENSSPAG00000000688	raver1	82	57.658	Stegastes_partitus
ENSMAUG00000017948	-	100	90.054	ENSSSCG00000013650	-	98	89.785	Sus_scrofa
ENSMAUG00000017948	-	97	50.474	ENSTRUG00000025641	raver1	78	60.000	Takifugu_rubripes
ENSMAUG00000017948	-	100	88.306	ENSTTRG00000009552	RAVER1	100	88.978	Tursiops_truncatus
ENSMAUG00000017948	-	100	89.785	ENSUAMG00000020385	RAVER1	98	89.919	Ursus_americanus
ENSMAUG00000017948	-	100	87.366	ENSVVUG00000028976	RAVER1	98	88.038	Vulpes_vulpes
ENSMAUG00000017948	-	100	53.927	ENSXETG00000011622	raver1	95	54.959	Xenopus_tropicalis
ENSMAUG00000017948	-	99	51.544	ENSXCOG00000016368	raver1	77	60.606	Xiphophorus_couchianus