EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000018858 (Gene tree)
Gene ID: 101823833
Gene Symbol: Hfm1
Alias: A330009G12Rik|LOC381663|Mer3|Sec63d1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 86796 bases
Position: chrKB708199.1:8574611-8661406
Accession: 101823833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000021043	ResIII	PF04851.15	1.4e-11	1	1
ENSMAUP00000021043	DEAD	PF00270.29	6.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000025037	-	4308	XM_005077384	ENSMAUP00000021043	1435 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000018858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000018858's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000018858	Hfm1	59	31.636	ENSMAUG00000011825	Snrnp200	75	31.636
ENSMAUG00000018858	Hfm1	51	35.909	ENSMAUG00000018304	Ascc3	61	35.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000018858	Hfm1	100	78.125	ENSG00000162669	HFM1	100	78.125	Homo_sapiens
ENSMAUG00000018858	Hfm1	62	64.551	ENSAPOG00000005304	hfm1	100	64.551	Acanthochromis_polyacanthus
ENSMAUG00000018858	Hfm1	100	76.960	ENSAMEG00000000432	HFM1	100	76.960	Ailuropoda_melanoleuca
ENSMAUG00000018858	Hfm1	71	58.537	ENSACIG00000021553	hfm1	91	58.052	Amphilophus_citrinellus
ENSMAUG00000018858	Hfm1	62	64.826	ENSAOCG00000022839	hfm1	100	64.826	Amphiprion_ocellaris
ENSMAUG00000018858	Hfm1	62	64.706	ENSAPEG00000014316	hfm1	100	64.706	Amphiprion_percula
ENSMAUG00000018858	Hfm1	81	52.381	ENSATEG00000019181	hfm1	80	61.768	Anabas_testudineus
ENSMAUG00000018858	Hfm1	100	58.089	ENSAPLG00000013639	HFM1	100	57.945	Anas_platyrhynchos
ENSMAUG00000018858	Hfm1	100	76.283	ENSANAG00000029513	HFM1	100	76.283	Aotus_nancymaae
ENSMAUG00000018858	Hfm1	65	62.084	ENSACLG00000009033	hfm1	97	63.723	Astatotilapia_calliptera
ENSMAUG00000018858	Hfm1	67	64.562	ENSAMXG00000006108	hfm1	73	60.617	Astyanax_mexicanus
ENSMAUG00000018858	Hfm1	100	75.728	ENSBTAG00000020856	HFM1	100	75.728	Bos_taurus
ENSMAUG00000018858	Hfm1	100	76.875	ENSCJAG00000001843	HFM1	100	76.875	Callithrix_jacchus
ENSMAUG00000018858	Hfm1	100	76.544	ENSCAFG00000020187	HFM1	100	76.544	Canis_familiaris
ENSMAUG00000018858	Hfm1	100	76.560	ENSTSYG00000014250	HFM1	100	76.560	Carlito_syrichta
ENSMAUG00000018858	Hfm1	99	73.556	ENSCPOG00000007421	HFM1	99	73.556	Cavia_porcellus
ENSMAUG00000018858	Hfm1	100	76.667	ENSCCAG00000033206	HFM1	100	76.667	Cebus_capucinus
ENSMAUG00000018858	Hfm1	100	77.569	ENSCATG00000030987	HFM1	100	77.569	Cercocebus_atys
ENSMAUG00000018858	Hfm1	100	74.527	ENSCLAG00000005173	HFM1	99	74.527	Chinchilla_lanigera
ENSMAUG00000018858	Hfm1	68	86.842	ENSCHOG00000011824	-	77	86.842	Choloepus_hoffmanni
ENSMAUG00000018858	Hfm1	100	88.219	ENSCGRG00001016995	Hfm1	100	88.219	Cricetulus_griseus_chok1gshd
ENSMAUG00000018858	Hfm1	100	92.559	ENSCGRG00000017181	Hfm1	100	92.559	Cricetulus_griseus_crigri
ENSMAUG00000018858	Hfm1	71	57.008	ENSCSEG00000017659	hfm1	94	57.211	Cynoglossus_semilaevis
ENSMAUG00000018858	Hfm1	50	66.994	ENSCVAG00000005075	hfm1	86	66.994	Cyprinodon_variegatus
ENSMAUG00000018858	Hfm1	76	53.791	ENSDARG00000104288	hfm1	96	53.791	Danio_rerio
ENSMAUG00000018858	Hfm1	100	72.776	ENSDNOG00000004776	HFM1	100	72.776	Dasypus_novemcinctus
ENSMAUG00000018858	Hfm1	100	74.176	ENSDORG00000014661	Hfm1	100	74.176	Dipodomys_ordii
ENSMAUG00000018858	Hfm1	71	81.514	ENSEASG00005015424	HFM1	97	81.514	Equus_asinus_asinus
ENSMAUG00000018858	Hfm1	100	75.825	ENSECAG00000024039	HFM1	100	75.825	Equus_caballus
ENSMAUG00000018858	Hfm1	63	65.419	ENSELUG00000018944	hfm1	97	65.419	Esox_lucius
ENSMAUG00000018858	Hfm1	100	77.462	ENSFCAG00000029116	HFM1	100	77.462	Felis_catus
ENSMAUG00000018858	Hfm1	100	57.721	ENSFALG00000001781	HFM1	100	58.040	Ficedula_albicollis
ENSMAUG00000018858	Hfm1	100	73.504	ENSFDAG00000020816	HFM1	100	73.504	Fukomys_damarensis
ENSMAUG00000018858	Hfm1	66	58.958	ENSGMOG00000017436	hfm1	99	59.143	Gadus_morhua
ENSMAUG00000018858	Hfm1	71	59.441	ENSGAFG00000018093	hfm1	94	64.277	Gambusia_affinis
ENSMAUG00000018858	Hfm1	66	59.917	ENSGACG00000015686	hfm1	99	60.146	Gasterosteus_aculeatus
ENSMAUG00000018858	Hfm1	100	77.917	ENSGGOG00000038524	HFM1	100	77.917	Gorilla_gorilla
ENSMAUG00000018858	Hfm1	65	63.158	ENSHBUG00000007309	hfm1	96	59.360	Haplochromis_burtoni
ENSMAUG00000018858	Hfm1	57	62.454	ENSHCOG00000019632	hfm1	97	62.454	Hippocampus_comes
ENSMAUG00000018858	Hfm1	71	61.100	ENSIPUG00000017020	hfm1	92	65.114	Ictalurus_punctatus
ENSMAUG00000018858	Hfm1	100	75.522	ENSJJAG00000017198	Hfm1	100	75.522	Jaculus_jaculus
ENSMAUG00000018858	Hfm1	62	61.197	ENSKMAG00000002282	hfm1	91	61.197	Kryptolebias_marmoratus
ENSMAUG00000018858	Hfm1	71	58.146	ENSLBEG00000006759	hfm1	96	63.842	Labrus_bergylta
ENSMAUG00000018858	Hfm1	66	67.528	ENSLACG00000010698	HFM1	100	64.279	Latimeria_chalumnae
ENSMAUG00000018858	Hfm1	72	63.324	ENSLOCG00000004931	hfm1	96	63.228	Lepisosteus_oculatus
ENSMAUG00000018858	Hfm1	51	85.830	ENSLAFG00000015903	-	99	85.830	Loxodonta_africana
ENSMAUG00000018858	Hfm1	100	74.965	ENSMFAG00000003649	HFM1	100	74.965	Macaca_fascicularis
ENSMAUG00000018858	Hfm1	100	77.431	ENSMMUG00000006819	HFM1	100	77.431	Macaca_mulatta
ENSMAUG00000018858	Hfm1	55	67.378	ENSMAMG00000004623	hfm1	99	71.212	Mastacembelus_armatus
ENSMAUG00000018858	Hfm1	65	62.084	ENSMZEG00005004679	hfm1	97	63.723	Maylandia_zebra
ENSMAUG00000018858	Hfm1	54	76.425	ENSMGAG00000008437	HFM1	96	76.425	Meleagris_gallopavo
ENSMAUG00000018858	Hfm1	100	76.891	ENSMICG00000037935	HFM1	100	76.891	Microcebus_murinus
ENSMAUG00000018858	Hfm1	100	86.221	ENSMOCG00000014812	Hfm1	100	86.221	Microtus_ochrogaster
ENSMAUG00000018858	Hfm1	62	62.065	ENSMMOG00000006148	hfm1	96	62.950	Mola_mola
ENSMAUG00000018858	Hfm1	65	62.260	ENSMALG00000002401	hfm1	96	63.753	Monopterus_albus
ENSMAUG00000018858	Hfm1	95	79.664	MGP_CAROLIEiJ_G0027496	Hfm1	100	79.664	Mus_caroli
ENSMAUG00000018858	Hfm1	100	84.482	ENSMUSG00000043410	Hfm1	100	84.482	Mus_musculus
ENSMAUG00000018858	Hfm1	100	84.134	MGP_PahariEiJ_G0017268	Hfm1	100	84.134	Mus_pahari
ENSMAUG00000018858	Hfm1	100	84.482	MGP_SPRETEiJ_G0028495	Hfm1	100	84.482	Mus_spretus
ENSMAUG00000018858	Hfm1	100	74.411	ENSMPUG00000004594	HFM1	100	74.411	Mustela_putorius_furo
ENSMAUG00000018858	Hfm1	100	74.688	ENSMLUG00000010200	HFM1	100	74.688	Myotis_lucifugus
ENSMAUG00000018858	Hfm1	65	59.184	ENSNBRG00000002910	hfm1	97	63.714	Neolamprologus_brichardi
ENSMAUG00000018858	Hfm1	100	74.931	ENSNLEG00000010285	HFM1	100	74.931	Nomascus_leucogenys
ENSMAUG00000018858	Hfm1	84	64.183	ENSMEUG00000015788	HFM1	84	64.183	Notamacropus_eugenii
ENSMAUG00000018858	Hfm1	84	74.455	ENSOPRG00000013916	HFM1	84	74.455	Ochotona_princeps
ENSMAUG00000018858	Hfm1	71	60.097	ENSONIG00000010590	hfm1	99	59.981	Oreochromis_niloticus
ENSMAUG00000018858	Hfm1	57	63.793	ENSORLG00000026844	hfm1	99	63.793	Oryzias_latipes
ENSMAUG00000018858	Hfm1	67	55.172	ENSORLG00020002951	hfm1	77	55.172	Oryzias_latipes_hni
ENSMAUG00000018858	Hfm1	72	57.604	ENSOMEG00000016474	hfm1	100	47.098	Oryzias_melastigma
ENSMAUG00000018858	Hfm1	85	80.179	ENSOGAG00000032369	HFM1	99	80.230	Otolemur_garnettii
ENSMAUG00000018858	Hfm1	100	76.161	ENSOARG00000015812	HFM1	100	76.161	Ovis_aries
ENSMAUG00000018858	Hfm1	92	79.759	ENSPPAG00000024582	HFM1	100	79.759	Pan_paniscus
ENSMAUG00000018858	Hfm1	100	77.393	ENSPPRG00000003270	HFM1	100	77.393	Panthera_pardus
ENSMAUG00000018858	Hfm1	100	77.254	ENSPTIG00000018881	HFM1	100	77.254	Panthera_tigris_altaica
ENSMAUG00000018858	Hfm1	100	78.056	ENSPTRG00000000948	HFM1	100	78.056	Pan_troglodytes
ENSMAUG00000018858	Hfm1	100	77.917	ENSPANG00000009838	HFM1	100	77.917	Papio_anubis
ENSMAUG00000018858	Hfm1	62	65.579	ENSPKIG00000003810	hfm1	95	66.223	Paramormyrops_kingsleyae
ENSMAUG00000018858	Hfm1	57	64.649	ENSPMGG00000011059	hfm1	100	64.649	Periophthalmus_magnuspinnatus
ENSMAUG00000018858	Hfm1	100	90.536	ENSPEMG00000022852	Hfm1	100	90.536	Peromyscus_maniculatus_bairdii
ENSMAUG00000018858	Hfm1	100	63.807	ENSPCIG00000014233	HFM1	100	63.807	Phascolarctos_cinereus
ENSMAUG00000018858	Hfm1	71	60.401	ENSPFOG00000017194	hfm1	100	60.592	Poecilia_formosa
ENSMAUG00000018858	Hfm1	71	61.143	ENSPLAG00000000571	hfm1	92	60.950	Poecilia_latipinna
ENSMAUG00000018858	Hfm1	71	61.009	ENSPMEG00000019475	hfm1	93	60.718	Poecilia_mexicana
ENSMAUG00000018858	Hfm1	71	60.721	ENSPREG00000007803	hfm1	94	63.636	Poecilia_reticulata
ENSMAUG00000018858	Hfm1	100	77.639	ENSPPYG00000001163	HFM1	100	77.639	Pongo_abelii
ENSMAUG00000018858	Hfm1	70	78.475	ENSPCAG00000004289	-	70	78.475	Procavia_capensis
ENSMAUG00000018858	Hfm1	100	68.724	ENSPVAG00000009713	HFM1	100	68.724	Pteropus_vampyrus
ENSMAUG00000018858	Hfm1	65	61.976	ENSPNYG00000001795	hfm1	97	63.723	Pundamilia_nyererei
ENSMAUG00000018858	Hfm1	58	66.429	ENSPNAG00000010865	hfm1	83	66.429	Pygocentrus_nattereri
ENSMAUG00000018858	Hfm1	100	83.438	ENSRNOG00000023299	Hfm1	100	83.438	Rattus_norvegicus
ENSMAUG00000018858	Hfm1	100	77.778	ENSRROG00000045569	HFM1	100	77.778	Rhinopithecus_roxellana
ENSMAUG00000018858	Hfm1	100	75.139	ENSSBOG00000027456	HFM1	100	75.139	Saimiri_boliviensis_boliviensis
ENSMAUG00000018858	Hfm1	59	68.092	ENSSHAG00000014616	-	98	68.092	Sarcophilus_harrisii
ENSMAUG00000018858	Hfm1	85	55.236	ENSSFOG00015020129	hfm1	82	55.359	Scleropages_formosus
ENSMAUG00000018858	Hfm1	62	64.206	ENSSMAG00000006907	hfm1	87	64.206	Scophthalmus_maximus
ENSMAUG00000018858	Hfm1	57	65.012	ENSSDUG00000011424	hfm1	93	65.012	Seriola_dumerili
ENSMAUG00000018858	Hfm1	58	65.259	ENSSLDG00000016386	hfm1	92	65.259	Seriola_lalandi_dorsalis
ENSMAUG00000018858	Hfm1	69	57.013	ENSSPAG00000001023	hfm1	94	65.066	Stegastes_partitus
ENSMAUG00000018858	Hfm1	100	73.939	ENSSSCG00000006912	HFM1	98	76.134	Sus_scrofa
ENSMAUG00000018858	Hfm1	66	73.877	ENSTGUG00000006172	HFM1	99	74.289	Taeniopygia_guttata
ENSMAUG00000018858	Hfm1	100	74.167	ENSTTRG00000013933	HFM1	100	74.167	Tursiops_truncatus
ENSMAUG00000018858	Hfm1	93	76.977	ENSVPAG00000011331	HFM1	93	76.977	Vicugna_pacos
ENSMAUG00000018858	Hfm1	71	78.876	ENSVVUG00000020760	HFM1	99	78.391	Vulpes_vulpes
ENSMAUG00000018858	Hfm1	57	65.133	ENSXMAG00000004178	hfm1	92	65.133	Xiphophorus_maculatus