EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000019086 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 1263 bases
Position: chrKB708889.1:31804-33066
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000021312	RRM_1	PF00076.22	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000025307	-	408	-	ENSMAUP00000021312	135 (aa)	-	UPI00001CF3B4

Gene Model

Click here to download ENSMAUG00000019086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000019086's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000019086	-	56	34.667	ENSMAUG00000017509	Rbm14	52	34.667
ENSMAUG00000019086	-	61	35.714	ENSMAUG00000011430	-	65	35.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000019086	-	100	98.519	ENSG00000124193	SRSF6	100	98.519	Homo_sapiens
ENSMAUG00000019086	-	58	93.590	ENSAPOG00000016635	-	52	91.566	Acanthochromis_polyacanthus
ENSMAUG00000019086	-	63	87.059	ENSACIG00000020091	-	81	87.059	Amphilophus_citrinellus
ENSMAUG00000019086	-	92	67.939	ENSAOCG00000019438	-	98	67.939	Amphiprion_ocellaris
ENSMAUG00000019086	-	100	98.519	ENSANAG00000024080	SRSF6	100	98.519	Aotus_nancymaae
ENSMAUG00000019086	-	54	89.041	ENSACLG00000024373	-	96	79.570	Astatotilapia_calliptera
ENSMAUG00000019086	-	55	91.892	ENSAMXG00000042692	-	74	75.000	Astyanax_mexicanus
ENSMAUG00000019086	-	100	99.259	ENSBTAG00000008527	SRSF6	100	99.259	Bos_taurus
ENSMAUG00000019086	-	100	98.519	ENSCJAG00000048403	SRSF6	100	98.519	Callithrix_jacchus
ENSMAUG00000019086	-	100	99.259	ENSCAFG00000009289	SRSF6	100	99.259	Canis_familiaris
ENSMAUG00000019086	-	100	99.259	ENSCAFG00020013559	SRSF6	100	99.259	Canis_lupus_dingo
ENSMAUG00000019086	-	100	99.259	ENSCHIG00000015890	-	100	99.259	Capra_hircus
ENSMAUG00000019086	-	100	98.519	ENSCPOG00000011761	SRSF6	100	98.519	Cavia_porcellus
ENSMAUG00000019086	-	100	98.519	ENSCCAG00000026018	-	100	98.519	Cebus_capucinus
ENSMAUG00000019086	-	100	98.519	ENSCATG00000030794	SRSF6	100	98.519	Cercocebus_atys
ENSMAUG00000019086	-	100	98.519	ENSCLAG00000010247	SRSF6	100	98.519	Chinchilla_lanigera
ENSMAUG00000019086	-	100	100.000	ENSCGRG00001022339	Srsf6	100	100.000	Cricetulus_griseus_chok1gshd
ENSMAUG00000019086	-	58	93.590	ENSCSEG00000019778	SRSF6	67	87.640	Cynoglossus_semilaevis
ENSMAUG00000019086	-	58	92.308	ENSCVAG00000001863	SRSF6	82	90.361	Cyprinodon_variegatus
ENSMAUG00000019086	-	55	90.541	ENSDARG00000016783	srsf6b	87	89.157	Danio_rerio
ENSMAUG00000019086	-	100	98.519	ENSDORG00000028378	Srsf6	100	98.519	Dipodomys_ordii
ENSMAUG00000019086	-	73	77.778	ENSELUG00000013506	SRSF6	88	77.778	Esox_lucius
ENSMAUG00000019086	-	98	59.286	ENSELUG00000024182	SRSF6	85	87.356	Esox_lucius
ENSMAUG00000019086	-	100	95.556	ENSGALG00000000990	SRSF6	100	95.556	Gallus_gallus
ENSMAUG00000019086	-	58	92.308	ENSGAFG00000019088	-	57	77.000	Gambusia_affinis
ENSMAUG00000019086	-	100	98.519	ENSGGOG00000009808	SRSF6	100	98.519	Gorilla_gorilla
ENSMAUG00000019086	-	100	98.519	ENSHGLG00000007348	SRSF6	100	98.519	Heterocephalus_glaber_female
ENSMAUG00000019086	-	100	98.519	ENSSTOG00000010866	SRSF6	100	98.519	Ictidomys_tridecemlineatus
ENSMAUG00000019086	-	100	98.519	ENSMFAG00000036925	SRSF6	100	98.519	Macaca_fascicularis
ENSMAUG00000019086	-	100	98.519	ENSMMUG00000006742	SRSF6	100	98.519	Macaca_mulatta
ENSMAUG00000019086	-	100	97.037	ENSMNEG00000027392	-	100	97.037	Macaca_nemestrina
ENSMAUG00000019086	-	63	87.059	ENSMAMG00000023477	-	89	87.059	Mastacembelus_armatus
ENSMAUG00000019086	-	100	98.519	ENSMICG00000008537	SRSF6	100	98.519	Microcebus_murinus
ENSMAUG00000019086	-	58	92.308	ENSMMOG00000015241	-	78	90.361	Mola_mola
ENSMAUG00000019086	-	100	100.000	MGP_CAROLIEiJ_G0024606	Srsf6	100	100.000	Mus_caroli
ENSMAUG00000019086	-	100	100.000	ENSMUSG00000016921	Srsf6	100	100.000	Mus_musculus
ENSMAUG00000019086	-	100	100.000	MGP_PahariEiJ_G0026050	Srsf6	100	100.000	Mus_pahari
ENSMAUG00000019086	-	100	100.000	MGP_SPRETEiJ_G0025528	Srsf6	100	100.000	Mus_spretus
ENSMAUG00000019086	-	100	98.519	ENSNGAG00000017560	Srsf6	100	98.519	Nannospalax_galili
ENSMAUG00000019086	-	100	98.519	ENSNLEG00000006524	SRSF6	100	98.519	Nomascus_leucogenys
ENSMAUG00000019086	-	100	98.519	ENSODEG00000016510	-	100	98.519	Octodon_degus
ENSMAUG00000019086	-	58	92.308	ENSORLG00020017506	srsf6a	59	81.250	Oryzias_latipes_hni
ENSMAUG00000019086	-	100	98.519	ENSPTRG00000044686	-	100	98.519	Pan_troglodytes
ENSMAUG00000019086	-	100	98.519	ENSPANG00000035224	SRSF6	100	98.519	Papio_anubis
ENSMAUG00000019086	-	59	75.000	ENSPKIG00000015703	-	61	75.000	Paramormyrops_kingsleyae
ENSMAUG00000019086	-	98	62.121	ENSPKIG00000018463	-	83	89.286	Paramormyrops_kingsleyae
ENSMAUG00000019086	-	58	93.590	ENSPKIG00000015603	-	60	91.667	Paramormyrops_kingsleyae
ENSMAUG00000019086	-	85	88.793	ENSPEMG00000022405	-	96	88.793	Peromyscus_maniculatus_bairdii
ENSMAUG00000019086	-	100	97.037	ENSPCIG00000003820	SRSF6	100	97.037	Phascolarctos_cinereus
ENSMAUG00000019086	-	58	92.308	ENSPLAG00000009243	srsf6a	52	89.157	Poecilia_latipinna
ENSMAUG00000019086	-	58	92.308	ENSPREG00000001040	srsf6a	66	77.000	Poecilia_reticulata
ENSMAUG00000019086	-	100	98.519	ENSPCOG00000026364	SRSF6	100	98.519	Propithecus_coquereli
ENSMAUG00000019086	-	60	91.358	ENSPNAG00000023179	-	62	91.358	Pygocentrus_nattereri
ENSMAUG00000019086	-	100	94.815	ENSRBIG00000041414	SRSF6	100	94.815	Rhinopithecus_bieti
ENSMAUG00000019086	-	100	98.519	ENSRROG00000029989	SRSF6	100	98.519	Rhinopithecus_roxellana
ENSMAUG00000019086	-	100	98.519	ENSSBOG00000033708	-	100	98.519	Saimiri_boliviensis_boliviensis
ENSMAUG00000019086	-	59	90.000	ENSSMAG00000014861	-	70	81.915	Scophthalmus_maximus
ENSMAUG00000019086	-	63	87.059	ENSSDUG00000011036	-	90	87.059	Seriola_dumerili
ENSMAUG00000019086	-	63	87.059	ENSSLDG00000014858	-	90	87.059	Seriola_lalandi_dorsalis
ENSMAUG00000019086	-	100	95.556	ENSSPUG00000004967	SRSF6	100	95.556	Sphenodon_punctatus
ENSMAUG00000019086	-	63	84.706	ENSSPAG00000021913	-	86	84.706	Stegastes_partitus
ENSMAUG00000019086	-	59	92.500	ENSTRUG00000021397	-	87	92.500	Takifugu_rubripes
ENSMAUG00000019086	-	100	99.259	ENSUAMG00000003559	SRSF6	100	99.259	Ursus_americanus
ENSMAUG00000019086	-	100	79.259	ENSVVUG00000019276	-	100	79.259	Vulpes_vulpes