EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000019131 (Gene tree)
Gene ID: 101837258
Gene Symbol: Prpf38b
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 9148 bases
Position: chrKB708191.1:9489951-9499098
Accession: 101837258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000021386	PRP38	PF03371.15	4.4e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000025381	-	3036	XM_005076655	ENSMAUP00000021386	545 (aa)	XP_005076712	A0A1U7QDC8

Gene Model

Click here to download ENSMAUG00000019131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000019131's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000019131	Prpf38b	100	92.139	ENSG00000134186	PRPF38B	100	96.335	Homo_sapiens
ENSMAUG00000019131	Prpf38b	100	90.676	ENSANAG00000028333	PRPF38B	100	96.335	Aotus_nancymaae
ENSMAUG00000019131	Prpf38b	100	97.258	ENSCGRG00001018841	Prpf38b	100	97.258	Cricetulus_griseus_chok1gshd
ENSMAUG00000019131	Prpf38b	83	97.345	ENSCGRG00000002972	Prpf38b	100	97.345	Cricetulus_griseus_crigri
ENSMAUG00000019131	Prpf38b	79	87.586	ENSDORG00000025236	-	97	88.361	Dipodomys_ordii
ENSMAUG00000019131	Prpf38b	100	89.744	ENSEEUG00000014328	PRPF38B	100	89.194	Erinaceus_europaeus
ENSMAUG00000019131	Prpf38b	100	89.031	ENSFDAG00000021009	PRPF38B	100	89.945	Fukomys_damarensis
ENSMAUG00000019131	Prpf38b	100	92.139	ENSGGOG00000011288	PRPF38B	100	96.335	Gorilla_gorilla
ENSMAUG00000019131	Prpf38b	91	85.542	ENSMGAG00000006188	PRPF38B	100	85.542	Meleagris_gallopavo
ENSMAUG00000019131	Prpf38b	100	95.229	MGP_CAROLIEiJ_G0025542	Prpf38b	99	97.849	Mus_caroli
ENSMAUG00000019131	Prpf38b	100	95.413	ENSMUSG00000027881	Prpf38b	99	98.925	Mus_musculus
ENSMAUG00000019131	Prpf38b	100	95.963	MGP_PahariEiJ_G0026988	Prpf38b	99	98.925	Mus_pahari
ENSMAUG00000019131	Prpf38b	100	95.780	MGP_SPRETEiJ_G0026492	Prpf38b	99	98.925	Mus_spretus
ENSMAUG00000019131	Prpf38b	100	92.687	ENSNLEG00000001645	-	100	96.335	Nomascus_leucogenys
ENSMAUG00000019131	Prpf38b	100	86.654	ENSNLEG00000030268	-	100	86.106	Nomascus_leucogenys
ENSMAUG00000019131	Prpf38b	100	92.139	ENSPPAG00000001260	PRPF38B	100	96.335	Pan_paniscus
ENSMAUG00000019131	Prpf38b	100	89.982	ENSPPRG00000002116	PRPF38B	98	97.354	Panthera_pardus
ENSMAUG00000019131	Prpf38b	100	92.139	ENSPTRG00000001032	PRPF38B	100	96.335	Pan_troglodytes
ENSMAUG00000019131	Prpf38b	100	91.042	ENSPANG00000007560	PRPF38B	100	96.335	Papio_anubis
ENSMAUG00000019131	Prpf38b	60	93.656	ENSPCIG00000024841	PRPF38B	60	94.833	Phascolarctos_cinereus
ENSMAUG00000019131	Prpf38b	100	89.964	ENSPVAG00000011929	-	100	91.606	Pteropus_vampyrus
ENSMAUG00000019131	Prpf38b	100	90.761	ENSSARG00000012818	-	100	91.273	Sorex_araneus
ENSMAUG00000019131	Prpf38b	77	84.507	ENSTGUG00000004594	-	96	84.116	Taeniopygia_guttata
ENSMAUG00000019131	Prpf38b	100	90.528	ENSUAMG00000023817	PRPF38B	100	88.342	Ursus_americanus