EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000019484 (Gene tree)
Gene ID: 101829518
Gene Symbol: Smg7
Alias: 9430023P16Rik
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 66724 bases
Position: chrKB708154.1:1950353-2017076
Accession: 101829518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000021931	EST1	PF10374.9	6.4e-25	1	1
ENSMAUP00000021926	EST1	PF10374.9	6.4e-25	1	1
ENSMAUP00000021925	EST1	PF10374.9	6.5e-25	1	1
ENSMAUP00000021922	EST1	PF10374.9	6.5e-25	1	1
ENSMAUP00000021931	EST1_DNA_bind	PF10373.9	8.4e-55	1	1
ENSMAUP00000021926	EST1_DNA_bind	PF10373.9	8.4e-55	1	1
ENSMAUP00000021925	EST1_DNA_bind	PF10373.9	8.5e-55	1	1
ENSMAUP00000021922	EST1_DNA_bind	PF10373.9	8.6e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000025923	-	3405	-	ENSMAUP00000021926	1134 (aa)	-	UPI0003597008
ENSMAUT00000025922	-	3423	XM_013114332	ENSMAUP00000021925	1140 (aa)	XP_012969786	UPI000359A4CB
ENSMAUT00000025919	-	4999	XM_013114331	ENSMAUP00000021922	1148 (aa)	XP_012969785	-
ENSMAUT00000025928	-	3402	-	ENSMAUP00000021931	1133 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000019484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000019484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000019484	Smg7	100	96.519	ENSG00000116698	SMG7	100	96.958	Homo_sapiens
ENSMAUG00000019484	Smg7	89	72.496	ENSAPOG00000009611	smg7	95	73.112	Acanthochromis_polyacanthus
ENSMAUG00000019484	Smg7	99	94.508	ENSAMEG00000002357	SMG7	99	94.686	Ailuropoda_melanoleuca
ENSMAUG00000019484	Smg7	97	63.758	ENSACIG00000015152	smg7	98	67.580	Amphilophus_citrinellus
ENSMAUG00000019484	Smg7	99	65.385	ENSAOCG00000013538	smg7	99	65.726	Amphiprion_ocellaris
ENSMAUG00000019484	Smg7	99	65.500	ENSAPEG00000007851	smg7	99	65.841	Amphiprion_percula
ENSMAUG00000019484	Smg7	99	64.885	ENSATEG00000006931	smg7	99	65.394	Anabas_testudineus
ENSMAUG00000019484	Smg7	100	87.314	ENSAPLG00000015811	SMG7	100	87.139	Anas_platyrhynchos
ENSMAUG00000019484	Smg7	100	84.127	ENSACAG00000014989	SMG7	100	84.211	Anolis_carolinensis
ENSMAUG00000019484	Smg7	100	95.075	ENSANAG00000028114	SMG7	100	95.075	Aotus_nancymaae
ENSMAUG00000019484	Smg7	99	64.346	ENSACLG00000022079	smg7	99	65.039	Astatotilapia_calliptera
ENSMAUG00000019484	Smg7	99	66.724	ENSAMXG00000020809	smg7	99	67.013	Astyanax_mexicanus
ENSMAUG00000019484	Smg7	100	95.213	ENSBTAG00000008003	SMG7	100	94.195	Bos_taurus
ENSMAUG00000019484	Smg7	100	96.084	ENSCJAG00000005135	SMG7	99	96.084	Callithrix_jacchus
ENSMAUG00000019484	Smg7	100	95.822	ENSCAFG00000013276	SMG7	98	95.997	Canis_familiaris
ENSMAUG00000019484	Smg7	100	95.822	ENSCAFG00020015475	SMG7	98	95.997	Canis_lupus_dingo
ENSMAUG00000019484	Smg7	99	95.272	ENSCHIG00000018192	SMG7	99	95.146	Capra_hircus
ENSMAUG00000019484	Smg7	100	95.648	ENSTSYG00000002667	SMG7	100	94.635	Carlito_syrichta
ENSMAUG00000019484	Smg7	100	96.258	ENSCPOG00000008906	SMG7	99	96.258	Cavia_porcellus
ENSMAUG00000019484	Smg7	100	95.163	ENSCCAG00000028596	SMG7	100	95.163	Cebus_capucinus
ENSMAUG00000019484	Smg7	100	96.693	ENSCATG00000011063	SMG7	100	95.515	Cercocebus_atys
ENSMAUG00000019484	Smg7	100	95.909	ENSCLAG00000010751	SMG7	100	95.909	Chinchilla_lanigera
ENSMAUG00000019484	Smg7	100	96.519	ENSCSAG00000012654	SMG7	98	96.519	Chlorocebus_sabaeus
ENSMAUG00000019484	Smg7	92	88.061	ENSCHOG00000010522	SMG7	93	88.348	Choloepus_hoffmanni
ENSMAUG00000019484	Smg7	100	90.184	ENSCPBG00000015724	SMG7	100	90.009	Chrysemys_picta_bellii
ENSMAUG00000019484	Smg7	99	95.390	ENSCANG00000015680	SMG7	99	95.390	Colobus_angolensis_palliatus
ENSMAUG00000019484	Smg7	100	99.216	ENSCGRG00001013705	Smg7	100	99.211	Cricetulus_griseus_chok1gshd
ENSMAUG00000019484	Smg7	100	99.216	ENSCGRG00000018401	Smg7	100	99.216	Cricetulus_griseus_crigri
ENSMAUG00000019484	Smg7	95	69.500	ENSCVAG00000011842	smg7	100	69.000	Cyprinodon_variegatus
ENSMAUG00000019484	Smg7	99	66.782	ENSDARG00000060767	smg7	99	66.869	Danio_rerio
ENSMAUG00000019484	Smg7	100	95.735	ENSDORG00000007331	Smg7	100	95.735	Dipodomys_ordii
ENSMAUG00000019484	Smg7	97	94.837	ENSETEG00000002654	SMG7	100	94.837	Echinops_telfairi
ENSMAUG00000019484	Smg7	100	96.670	ENSEASG00005006524	SMG7	100	96.670	Equus_asinus_asinus
ENSMAUG00000019484	Smg7	100	96.582	ENSECAG00000004313	SMG7	100	96.582	Equus_caballus
ENSMAUG00000019484	Smg7	97	94.661	ENSEEUG00000002024	SMG7	94	94.661	Erinaceus_europaeus
ENSMAUG00000019484	Smg7	99	64.851	ENSELUG00000010293	smg7	99	65.017	Esox_lucius
ENSMAUG00000019484	Smg7	100	96.231	ENSFCAG00000010900	SMG7	100	96.318	Felis_catus
ENSMAUG00000019484	Smg7	99	82.794	ENSFALG00000003047	SMG7	100	82.738	Ficedula_albicollis
ENSMAUG00000019484	Smg7	99	96.429	ENSFDAG00000012121	SMG7	99	96.429	Fukomys_damarensis
ENSMAUG00000019484	Smg7	99	64.096	ENSFHEG00000011073	smg7	99	63.551	Fundulus_heteroclitus
ENSMAUG00000019484	Smg7	89	67.153	ENSGMOG00000004916	smg7	92	67.153	Gadus_morhua
ENSMAUG00000019484	Smg7	100	88.024	ENSGALG00000004667	SMG7	100	87.850	Gallus_gallus
ENSMAUG00000019484	Smg7	99	63.801	ENSGAFG00000019000	smg7	99	63.839	Gambusia_affinis
ENSMAUG00000019484	Smg7	97	64.161	ENSGACG00000001634	smg7	99	64.454	Gasterosteus_aculeatus
ENSMAUG00000019484	Smg7	100	96.780	ENSGGOG00000002342	SMG7	100	95.602	Gorilla_gorilla
ENSMAUG00000019484	Smg7	99	64.244	ENSHBUG00000003726	smg7	97	72.589	Haplochromis_burtoni
ENSMAUG00000019484	Smg7	99	96.253	ENSHGLG00000009353	SMG7	100	96.168	Heterocephalus_glaber_female
ENSMAUG00000019484	Smg7	100	88.431	ENSHGLG00100004878	-	100	88.431	Heterocephalus_glaber_male
ENSMAUG00000019484	Smg7	100	95.251	ENSHGLG00100009637	-	100	95.251	Heterocephalus_glaber_male
ENSMAUG00000019484	Smg7	99	66.919	ENSIPUG00000016997	smg7	99	67.130	Ictalurus_punctatus
ENSMAUG00000019484	Smg7	100	96.780	ENSSTOG00000000401	SMG7	100	96.780	Ictidomys_tridecemlineatus
ENSMAUG00000019484	Smg7	100	95.351	ENSJJAG00000012351	Smg7	100	95.351	Jaculus_jaculus
ENSMAUG00000019484	Smg7	90	70.000	ENSKMAG00000004900	smg7	97	70.000	Kryptolebias_marmoratus
ENSMAUG00000019484	Smg7	99	64.691	ENSLBEG00000002983	smg7	99	64.948	Labrus_bergylta
ENSMAUG00000019484	Smg7	52	61.538	ENSLBEG00000005220	-	75	63.222	Labrus_bergylta
ENSMAUG00000019484	Smg7	99	75.347	ENSLACG00000000972	SMG7	99	75.239	Latimeria_chalumnae
ENSMAUG00000019484	Smg7	99	67.391	ENSLOCG00000002010	smg7	99	67.726	Lepisosteus_oculatus
ENSMAUG00000019484	Smg7	100	96.171	ENSLAFG00000008186	SMG7	100	96.171	Loxodonta_africana
ENSMAUG00000019484	Smg7	100	96.780	ENSMFAG00000031653	SMG7	100	96.757	Macaca_fascicularis
ENSMAUG00000019484	Smg7	100	96.693	ENSMMUG00000018458	SMG7	98	96.693	Macaca_mulatta
ENSMAUG00000019484	Smg7	100	95.515	ENSMNEG00000034798	SMG7	100	95.515	Macaca_nemestrina
ENSMAUG00000019484	Smg7	100	96.693	ENSMLEG00000037170	SMG7	100	95.515	Mandrillus_leucophaeus
ENSMAUG00000019484	Smg7	88	63.915	ENSMAMG00000018733	smg7	85	64.569	Mastacembelus_armatus
ENSMAUG00000019484	Smg7	99	64.816	ENSMZEG00005015247	smg7	99	65.039	Maylandia_zebra
ENSMAUG00000019484	Smg7	99	87.721	ENSMGAG00000001561	SMG7	99	87.544	Meleagris_gallopavo
ENSMAUG00000019484	Smg7	100	96.519	ENSMICG00000007145	SMG7	100	96.519	Microcebus_murinus
ENSMAUG00000019484	Smg7	100	98.693	ENSMOCG00000020748	Smg7	100	98.693	Microtus_ochrogaster
ENSMAUG00000019484	Smg7	99	63.983	ENSMMOG00000001524	smg7	99	64.062	Mola_mola
ENSMAUG00000019484	Smg7	92	91.556	ENSMODG00000007139	SMG7	99	91.556	Monodelphis_domestica
ENSMAUG00000019484	Smg7	99	64.721	ENSMALG00000000061	smg7	93	67.662	Monopterus_albus
ENSMAUG00000019484	Smg7	100	98.519	MGP_CAROLIEiJ_G0014704	Smg7	100	98.519	Mus_caroli
ENSMAUG00000019484	Smg7	100	98.345	ENSMUSG00000042772	Smg7	100	98.345	Mus_musculus
ENSMAUG00000019484	Smg7	100	98.432	MGP_PahariEiJ_G0027940	Smg7	100	98.432	Mus_pahari
ENSMAUG00000019484	Smg7	100	98.432	MGP_SPRETEiJ_G0015511	Smg7	100	98.432	Mus_spretus
ENSMAUG00000019484	Smg7	99	95.807	ENSMPUG00000011732	SMG7	97	95.986	Mustela_putorius_furo
ENSMAUG00000019484	Smg7	99	95.450	ENSMLUG00000015417	SMG7	99	95.322	Myotis_lucifugus
ENSMAUG00000019484	Smg7	100	97.125	ENSNGAG00000009836	Smg7	100	97.125	Nannospalax_galili
ENSMAUG00000019484	Smg7	98	60.382	ENSNBRG00000024343	smg7	98	70.476	Neolamprologus_brichardi
ENSMAUG00000019484	Smg7	100	96.693	ENSNLEG00000018018	SMG7	100	95.515	Nomascus_leucogenys
ENSMAUG00000019484	Smg7	77	85.431	ENSMEUG00000004681	SMG7	73	91.463	Notamacropus_eugenii
ENSMAUG00000019484	Smg7	96	84.018	ENSOPRG00000013942	SMG7	96	83.744	Ochotona_princeps
ENSMAUG00000019484	Smg7	100	96.084	ENSODEG00000010390	SMG7	100	96.084	Octodon_degus
ENSMAUG00000019484	Smg7	99	63.959	ENSONIG00000000277	smg7	99	64.646	Oreochromis_niloticus
ENSMAUG00000019484	Smg7	99	90.764	ENSOANG00000000994	SMG7	100	90.691	Ornithorhynchus_anatinus
ENSMAUG00000019484	Smg7	100	88.860	ENSOCUG00000005887	SMG7	94	89.034	Oryctolagus_cuniculus
ENSMAUG00000019484	Smg7	99	62.912	ENSORLG00000007314	smg7	70	92.105	Oryzias_latipes
ENSMAUG00000019484	Smg7	99	63.258	ENSORLG00020015779	smg7	70	92.105	Oryzias_latipes_hni
ENSMAUG00000019484	Smg7	99	64.599	ENSORLG00015012289	smg7	99	62.781	Oryzias_latipes_hsok
ENSMAUG00000019484	Smg7	99	62.812	ENSOMEG00000002328	smg7	99	62.812	Oryzias_melastigma
ENSMAUG00000019484	Smg7	97	95.920	ENSOGAG00000003107	SMG7	94	96.102	Otolemur_garnettii
ENSMAUG00000019484	Smg7	100	95.300	ENSOARG00000001352	SMG7	98	95.300	Ovis_aries
ENSMAUG00000019484	Smg7	100	95.515	ENSPPAG00000031619	SMG7	100	95.515	Pan_paniscus
ENSMAUG00000019484	Smg7	100	96.345	ENSPPRG00000011222	SMG7	100	95.339	Panthera_pardus
ENSMAUG00000019484	Smg7	96	96.310	ENSPTIG00000007242	SMG7	100	92.489	Panthera_tigris_altaica
ENSMAUG00000019484	Smg7	100	95.515	ENSPTRG00000001764	SMG7	100	95.515	Pan_troglodytes
ENSMAUG00000019484	Smg7	100	96.693	ENSPANG00000004520	SMG7	100	95.515	Papio_anubis
ENSMAUG00000019484	Smg7	99	64.340	ENSPKIG00000007242	smg7	99	68.500	Paramormyrops_kingsleyae
ENSMAUG00000019484	Smg7	99	91.533	ENSPSIG00000012201	SMG7	99	90.997	Pelodiscus_sinensis
ENSMAUG00000019484	Smg7	71	42.249	ENSPMGG00000021833	smg7	89	53.500	Periophthalmus_magnuspinnatus
ENSMAUG00000019484	Smg7	100	97.822	ENSPEMG00000011315	Smg7	100	97.822	Peromyscus_maniculatus_bairdii
ENSMAUG00000019484	Smg7	100	91.740	ENSPCIG00000003786	SMG7	100	91.564	Phascolarctos_cinereus
ENSMAUG00000019484	Smg7	99	63.006	ENSPFOG00000019219	smg7	99	63.201	Poecilia_formosa
ENSMAUG00000019484	Smg7	99	64.096	ENSPLAG00000001446	smg7	99	64.010	Poecilia_latipinna
ENSMAUG00000019484	Smg7	96	63.274	ENSPMEG00000005218	smg7	99	63.186	Poecilia_mexicana
ENSMAUG00000019484	Smg7	87	60.767	ENSPREG00000019039	smg7	91	60.707	Poecilia_reticulata
ENSMAUG00000019484	Smg7	100	95.602	ENSPPYG00000000427	SMG7	100	95.602	Pongo_abelii
ENSMAUG00000019484	Smg7	95	84.779	ENSPCAG00000008360	SMG7	95	83.971	Procavia_capensis
ENSMAUG00000019484	Smg7	100	96.519	ENSPCOG00000011996	SMG7	98	96.519	Propithecus_coquereli
ENSMAUG00000019484	Smg7	92	90.057	ENSPVAG00000000851	SMG7	89	90.385	Pteropus_vampyrus
ENSMAUG00000019484	Smg7	99	65.064	ENSPNYG00000007643	smg7	99	64.979	Pundamilia_nyererei
ENSMAUG00000019484	Smg7	99	67.386	ENSPNAG00000011374	smg7	98	68.687	Pygocentrus_nattereri
ENSMAUG00000019484	Smg7	100	98.172	ENSRNOG00000027962	Smg7	100	98.160	Rattus_norvegicus
ENSMAUG00000019484	Smg7	100	96.606	ENSRBIG00000036316	SMG7	100	95.427	Rhinopithecus_bieti
ENSMAUG00000019484	Smg7	100	96.606	ENSRROG00000035719	SMG7	100	96.582	Rhinopithecus_roxellana
ENSMAUG00000019484	Smg7	100	96.144	ENSSBOG00000023454	SMG7	100	96.144	Saimiri_boliviensis_boliviensis
ENSMAUG00000019484	Smg7	100	91.572	ENSSHAG00000013147	SMG7	100	91.308	Sarcophilus_harrisii
ENSMAUG00000019484	Smg7	93	75.000	ENSSFOG00015017252	smg7	99	76.842	Scleropages_formosus
ENSMAUG00000019484	Smg7	99	64.519	ENSSMAG00000006067	smg7	99	64.580	Scophthalmus_maximus
ENSMAUG00000019484	Smg7	95	70.932	ENSSDUG00000017543	smg7	99	65.034	Seriola_dumerili
ENSMAUG00000019484	Smg7	99	88.339	ENSSPUG00000002064	SMG7	99	88.163	Sphenodon_punctatus
ENSMAUG00000019484	Smg7	100	65.142	ENSSPAG00000008733	smg7	100	65.232	Stegastes_partitus
ENSMAUG00000019484	Smg7	100	96.144	ENSSSCG00000015558	SMG7	100	96.144	Sus_scrofa
ENSMAUG00000019484	Smg7	99	87.753	ENSTGUG00000003928	SMG7	100	87.665	Taeniopygia_guttata
ENSMAUG00000019484	Smg7	99	63.331	ENSTNIG00000002802	smg7	99	63.207	Tetraodon_nigroviridis
ENSMAUG00000019484	Smg7	77	94.068	ENSTBEG00000003220	SMG7	75	94.068	Tupaia_belangeri
ENSMAUG00000019484	Smg7	96	95.941	ENSTTRG00000014778	SMG7	94	95.890	Tursiops_truncatus
ENSMAUG00000019484	Smg7	97	91.538	ENSUAMG00000017473	SMG7	100	92.223	Ursus_americanus
ENSMAUG00000019484	Smg7	97	95.905	ENSUMAG00000016389	SMG7	100	96.087	Ursus_maritimus
ENSMAUG00000019484	Smg7	100	96.144	ENSVVUG00000008976	SMG7	100	96.318	Vulpes_vulpes
ENSMAUG00000019484	Smg7	100	70.156	ENSXETG00000012528	smg7	100	69.991	Xenopus_tropicalis
ENSMAUG00000019484	Smg7	99	64.034	ENSXMAG00000007123	smg7	99	64.206	Xiphophorus_maculatus