EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000019737 (Gene tree)
Gene ID: 101834530
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide F
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 4907 bases
Position: chrKB708138.1:7048495-7053401
Accession: 101834530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000022253	LSM	PF01423.22	2.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000026251	-	1127	XM_005067937	ENSMAUP00000022253	74 (aa)	XP_005067994	A0A1U7QKG8

Gene Model

Click here to download ENSMAUG00000019737's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000019737's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000019737	-	80	52.542	ENSMAUG00000014938	Lsm6	74	52.542
ENSMAUG00000019737	-	82	93.443	ENSMAUG00000010289	-	76	93.443
ENSMAUG00000019737	-	85	93.651	ENSMAUG00000008799	-	73	93.651
ENSMAUG00000019737	-	100	100.000	ENSMAUG00000016909	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000019737	-	100	100.000	ENSG00000139343	SNRPF	86	100.000	Homo_sapiens
ENSMAUG00000019737	-	100	97.297	ENSAPOG00000003377	snrpf	58	97.297	Acanthochromis_polyacanthus
ENSMAUG00000019737	-	100	100.000	ENSAMEG00000002166	-	87	100.000	Ailuropoda_melanoleuca
ENSMAUG00000019737	-	86	85.938	ENSAMEG00000018718	-	73	87.302	Ailuropoda_melanoleuca
ENSMAUG00000019737	-	100	97.297	ENSACIG00000013216	snrpf	87	97.297	Amphilophus_citrinellus
ENSMAUG00000019737	-	100	97.297	ENSAOCG00000015108	snrpf	87	97.297	Amphiprion_ocellaris
ENSMAUG00000019737	-	100	97.297	ENSAPEG00000022022	snrpf	87	97.297	Amphiprion_percula
ENSMAUG00000019737	-	100	97.297	ENSATEG00000022625	snrpf	80	97.297	Anabas_testudineus
ENSMAUG00000019737	-	100	98.649	ENSACAG00000014073	SNRPF	85	98.649	Anolis_carolinensis
ENSMAUG00000019737	-	84	67.742	ENSANAG00000025860	-	67	67.742	Aotus_nancymaae
ENSMAUG00000019737	-	85	92.063	ENSANAG00000020297	-	58	92.063	Aotus_nancymaae
ENSMAUG00000019737	-	100	100.000	ENSANAG00000032845	SNRPF	86	100.000	Aotus_nancymaae
ENSMAUG00000019737	-	100	97.297	ENSACLG00000016066	snrpf	87	97.297	Astatotilapia_calliptera
ENSMAUG00000019737	-	85	93.651	ENSAMXG00000007421	snrpf	73	93.651	Astyanax_mexicanus
ENSMAUG00000019737	-	100	100.000	ENSBTAG00000016271	SNRPF	86	100.000	Bos_taurus
ENSMAUG00000019737	-	86	95.312	ENSBTAG00000050012	-	75	95.082	Bos_taurus
ENSMAUG00000019737	-	91	71.642	WBGene00004918	snr-5	73	74.194	Caenorhabditis_elegans
ENSMAUG00000019737	-	100	100.000	ENSCJAG00000002705	-	86	100.000	Callithrix_jacchus
ENSMAUG00000019737	-	100	100.000	ENSCAFG00000006395	-	67	100.000	Canis_familiaris
ENSMAUG00000019737	-	82	95.082	ENSCAFG00000031151	-	73	95.238	Canis_familiaris
ENSMAUG00000019737	-	82	95.082	ENSCAFG00020010823	-	73	95.238	Canis_lupus_dingo
ENSMAUG00000019737	-	96	87.324	ENSCAFG00020013161	-	67	96.825	Canis_lupus_dingo
ENSMAUG00000019737	-	85	85.714	ENSTSYG00000030635	-	72	85.714	Carlito_syrichta
ENSMAUG00000019737	-	85	92.188	ENSTSYG00000036502	-	73	92.188	Carlito_syrichta
ENSMAUG00000019737	-	96	94.366	ENSTSYG00000031636	-	53	96.825	Carlito_syrichta
ENSMAUG00000019737	-	100	100.000	ENSCAPG00000007242	SNRPF	87	100.000	Cavia_aperea
ENSMAUG00000019737	-	100	100.000	ENSCPOG00000013898	SNRPF	86	100.000	Cavia_porcellus
ENSMAUG00000019737	-	100	100.000	ENSCCAG00000037378	-	86	100.000	Cebus_capucinus
ENSMAUG00000019737	-	100	90.541	ENSCCAG00000033627	-	50	92.063	Cebus_capucinus
ENSMAUG00000019737	-	100	98.649	ENSCCAG00000017356	-	86	98.649	Cebus_capucinus
ENSMAUG00000019737	-	100	100.000	ENSCLAG00000007200	SNRPF	86	100.000	Chinchilla_lanigera
ENSMAUG00000019737	-	100	100.000	ENSCSAG00000003602	-	60	100.000	Chlorocebus_sabaeus
ENSMAUG00000019737	-	70	100.000	ENSCHOG00000009392	SNRPF	81	100.000	Choloepus_hoffmanni
ENSMAUG00000019737	-	100	89.189	ENSCPBG00000026463	-	73	90.476	Chrysemys_picta_bellii
ENSMAUG00000019737	-	100	87.838	ENSCPBG00000001985	-	75	90.476	Chrysemys_picta_bellii
ENSMAUG00000019737	-	100	94.595	ENSCPBG00000024287	-	58	94.595	Chrysemys_picta_bellii
ENSMAUG00000019737	-	85	90.476	ENSCPBG00000006227	-	73	90.476	Chrysemys_picta_bellii
ENSMAUG00000019737	-	100	87.838	ENSCSAVG00000007498	-	72	90.476	Ciona_savignyi
ENSMAUG00000019737	-	100	100.000	ENSCGRG00001017100	-	86	100.000	Cricetulus_griseus_chok1gshd
ENSMAUG00000019737	-	100	100.000	ENSCGRG00000000336	-	86	100.000	Cricetulus_griseus_crigri
ENSMAUG00000019737	-	92	92.647	ENSCGRG00000018878	-	78	92.063	Cricetulus_griseus_crigri
ENSMAUG00000019737	-	85	95.238	ENSCSEG00000004748	snrpf	73	95.238	Cynoglossus_semilaevis
ENSMAUG00000019737	-	100	97.297	ENSCVAG00000000397	snrpf	59	97.297	Cyprinodon_variegatus
ENSMAUG00000019737	-	100	94.737	ENSDARG00000105037	snrpf	86	94.737	Danio_rerio
ENSMAUG00000019737	-	85	84.127	ENSDNOG00000049373	-	55	84.127	Dasypus_novemcinctus
ENSMAUG00000019737	-	100	98.649	ENSDNOG00000048989	-	66	98.649	Dasypus_novemcinctus
ENSMAUG00000019737	-	81	90.000	ENSDORG00000025351	-	83	90.000	Dipodomys_ordii
ENSMAUG00000019737	-	95	98.571	ENSDORG00000029740	-	85	98.571	Dipodomys_ordii
ENSMAUG00000019737	-	100	78.378	FBgn0000426	SmF	72	82.540	Drosophila_melanogaster
ENSMAUG00000019737	-	100	100.000	ENSETEG00000001558	-	86	100.000	Echinops_telfairi
ENSMAUG00000019737	-	100	74.324	ENSEBUG00000001793	-	63	86.441	Eptatretus_burgeri
ENSMAUG00000019737	-	100	100.000	ENSECAG00000019817	SNRPF	60	100.000	Equus_caballus
ENSMAUG00000019737	-	100	100.000	ENSEEUG00000013509	SNRPF	87	100.000	Erinaceus_europaeus
ENSMAUG00000019737	-	85	93.651	ENSELUG00000003121	RUXF	73	93.651	Esox_lucius
ENSMAUG00000019737	-	100	90.541	ENSELUG00000007737	RUXF	72	92.063	Esox_lucius
ENSMAUG00000019737	-	97	77.778	ENSFCAG00000031148	-	61	75.758	Felis_catus
ENSMAUG00000019737	-	85	74.603	ENSFCAG00000021942	-	72	74.603	Felis_catus
ENSMAUG00000019737	-	100	100.000	ENSFCAG00000029966	-	86	100.000	Felis_catus
ENSMAUG00000019737	-	100	100.000	ENSFALG00000010799	SNRPF	86	100.000	Ficedula_albicollis
ENSMAUG00000019737	-	100	100.000	ENSFDAG00000002831	-	86	100.000	Fukomys_damarensis
ENSMAUG00000019737	-	100	97.297	ENSFHEG00000003240	snrpf	65	97.297	Fundulus_heteroclitus
ENSMAUG00000019737	-	100	97.297	ENSGMOG00000007741	snrpf	87	97.297	Gadus_morhua
ENSMAUG00000019737	-	100	100.000	ENSGALG00000011409	SNRPF	86	100.000	Gallus_gallus
ENSMAUG00000019737	-	100	97.297	ENSGAFG00000016187	snrpf	85	97.297	Gambusia_affinis
ENSMAUG00000019737	-	85	95.238	ENSGACG00000020055	snrpf	74	95.238	Gasterosteus_aculeatus
ENSMAUG00000019737	-	77	87.719	ENSGAGG00000014132	-	69	87.719	Gopherus_agassizii
ENSMAUG00000019737	-	100	93.243	ENSGAGG00000012945	-	58	96.825	Gopherus_agassizii
ENSMAUG00000019737	-	81	91.667	ENSGAGG00000011163	-	100	91.667	Gopherus_agassizii
ENSMAUG00000019737	-	100	90.541	ENSGAGG00000022991	-	74	93.651	Gopherus_agassizii
ENSMAUG00000019737	-	97	81.944	ENSGGOG00000039936	-	68	79.365	Gorilla_gorilla
ENSMAUG00000019737	-	91	76.119	ENSGGOG00000039564	-	74	74.603	Gorilla_gorilla
ENSMAUG00000019737	-	100	100.000	ENSGGOG00000001127	-	87	100.000	Gorilla_gorilla
ENSMAUG00000019737	-	100	100.000	ENSHGLG00000009108	SNRPF	86	100.000	Heterocephalus_glaber_female
ENSMAUG00000019737	-	100	98.649	ENSHGLG00000021172	-	86	98.649	Heterocephalus_glaber_female
ENSMAUG00000019737	-	100	100.000	ENSHGLG00100008103	-	87	100.000	Heterocephalus_glaber_male
ENSMAUG00000019737	-	100	98.649	ENSHGLG00100019596	-	86	98.649	Heterocephalus_glaber_male
ENSMAUG00000019737	-	100	97.297	ENSIPUG00000018994	snrpf	87	97.297	Ictalurus_punctatus
ENSMAUG00000019737	-	100	100.000	ENSSTOG00000010434	-	86	100.000	Ictidomys_tridecemlineatus
ENSMAUG00000019737	-	100	85.135	ENSJJAG00000010502	-	75	87.302	Jaculus_jaculus
ENSMAUG00000019737	-	100	100.000	ENSJJAG00000011272	-	86	100.000	Jaculus_jaculus
ENSMAUG00000019737	-	91	94.030	ENSJJAG00000004828	-	100	94.030	Jaculus_jaculus
ENSMAUG00000019737	-	100	82.432	ENSJJAG00000004558	-	75	84.127	Jaculus_jaculus
ENSMAUG00000019737	-	100	97.297	ENSKMAG00000013566	snrpf	86	97.297	Kryptolebias_marmoratus
ENSMAUG00000019737	-	85	95.238	ENSLBEG00000008800	snrpf	73	95.238	Labrus_bergylta
ENSMAUG00000019737	-	100	100.000	ENSLACG00000002456	-	63	100.000	Latimeria_chalumnae
ENSMAUG00000019737	-	85	93.651	ENSLOCG00000015744	snrpf	73	93.651	Lepisosteus_oculatus
ENSMAUG00000019737	-	100	100.000	ENSLAFG00000017426	SNRPF	86	100.000	Loxodonta_africana
ENSMAUG00000019737	-	85	95.238	ENSMAMG00000016593	snrpf	74	95.238	Mastacembelus_armatus
ENSMAUG00000019737	-	100	97.297	ENSMZEG00005014701	snrpf	87	97.297	Maylandia_zebra
ENSMAUG00000019737	-	100	100.000	ENSMGAG00000011453	-	67	100.000	Meleagris_gallopavo
ENSMAUG00000019737	-	100	100.000	ENSMICG00000012153	-	86	100.000	Microcebus_murinus
ENSMAUG00000019737	-	100	97.297	ENSMICG00000030494	-	59	97.297	Microcebus_murinus
ENSMAUG00000019737	-	85	84.127	ENSMOCG00000022166	-	69	84.127	Microtus_ochrogaster
ENSMAUG00000019737	-	100	100.000	ENSMOCG00000020437	Snrpf	86	100.000	Microtus_ochrogaster
ENSMAUG00000019737	-	84	85.484	ENSMOCG00000020220	-	79	85.484	Microtus_ochrogaster
ENSMAUG00000019737	-	100	95.946	ENSMMOG00000007127	snrpf	87	95.946	Mola_mola
ENSMAUG00000019737	-	100	100.000	ENSMODG00000008091	SNRPF	65	100.000	Monodelphis_domestica
ENSMAUG00000019737	-	100	97.297	ENSMALG00000012328	snrpf	87	97.297	Monopterus_albus
ENSMAUG00000019737	-	100	100.000	MGP_CAROLIEiJ_G0015735	-	86	100.000	Mus_caroli
ENSMAUG00000019737	-	100	100.000	ENSMUSG00000020018	Snrpf	86	100.000	Mus_musculus
ENSMAUG00000019737	-	100	100.000	MGP_PahariEiJ_G0031350	Snrpf	86	100.000	Mus_pahari
ENSMAUG00000019737	-	100	100.000	MGP_SPRETEiJ_G0016553	Snrpf	86	100.000	Mus_spretus
ENSMAUG00000019737	-	100	100.000	ENSMPUG00000007176	-	66	100.000	Mustela_putorius_furo
ENSMAUG00000019737	-	100	100.000	ENSMLUG00000027932	-	70	100.000	Myotis_lucifugus
ENSMAUG00000019737	-	100	100.000	ENSMLUG00000026149	-	70	100.000	Myotis_lucifugus
ENSMAUG00000019737	-	100	100.000	ENSMLUG00000013577	-	87	100.000	Myotis_lucifugus
ENSMAUG00000019737	-	100	79.730	ENSMLUG00000026269	-	59	77.778	Myotis_lucifugus
ENSMAUG00000019737	-	100	100.000	ENSMLUG00000029201	-	70	100.000	Myotis_lucifugus
ENSMAUG00000019737	-	85	90.476	ENSNGAG00000005851	-	71	90.000	Nannospalax_galili
ENSMAUG00000019737	-	100	100.000	ENSNGAG00000024292	-	86	100.000	Nannospalax_galili
ENSMAUG00000019737	-	100	97.297	ENSNBRG00000011682	snrpf	76	97.297	Neolamprologus_brichardi
ENSMAUG00000019737	-	85	65.079	ENSMEUG00000000671	SNRPF	74	65.079	Notamacropus_eugenii
ENSMAUG00000019737	-	100	100.000	ENSODEG00000010328	-	87	100.000	Octodon_degus
ENSMAUG00000019737	-	100	100.000	ENSOCUG00000010925	SNRPF	65	100.000	Oryctolagus_cuniculus
ENSMAUG00000019737	-	85	93.651	ENSORLG00020008216	snrpf	74	93.651	Oryzias_latipes_hni
ENSMAUG00000019737	-	85	93.651	ENSORLG00015007418	snrpf	74	93.651	Oryzias_latipes_hsok
ENSMAUG00000019737	-	85	95.238	ENSOMEG00000003018	snrpf	74	95.238	Oryzias_melastigma
ENSMAUG00000019737	-	100	97.297	ENSOGAG00000030323	-	86	97.297	Otolemur_garnettii
ENSMAUG00000019737	-	100	100.000	ENSOARG00000011853	-	64	100.000	Ovis_aries
ENSMAUG00000019737	-	97	83.333	ENSPPAG00000037544	-	68	80.952	Pan_paniscus
ENSMAUG00000019737	-	91	77.612	ENSPPAG00000037479	-	74	76.190	Pan_paniscus
ENSMAUG00000019737	-	100	100.000	ENSPPRG00000005875	-	86	100.000	Panthera_pardus
ENSMAUG00000019737	-	97	76.389	ENSPPRG00000007449	-	64	76.190	Panthera_pardus
ENSMAUG00000019737	-	97	79.167	ENSPTIG00000005117	-	75	76.190	Panthera_tigris_altaica
ENSMAUG00000019737	-	100	100.000	ENSPTIG00000007520	SNRPF	86	100.000	Panthera_tigris_altaica
ENSMAUG00000019737	-	97	83.333	ENSPTRG00000043814	-	68	80.952	Pan_troglodytes
ENSMAUG00000019737	-	91	76.119	ENSPTRG00000047717	-	74	74.603	Pan_troglodytes
ENSMAUG00000019737	-	100	97.297	ENSPKIG00000014784	snrpf	81	97.297	Paramormyrops_kingsleyae
ENSMAUG00000019737	-	100	100.000	ENSPSIG00000016462	SNRPF	86	100.000	Pelodiscus_sinensis
ENSMAUG00000019737	-	100	95.946	ENSPMGG00000023548	snrpf	87	95.946	Periophthalmus_magnuspinnatus
ENSMAUG00000019737	-	100	100.000	ENSPEMG00000023326	Snrpf	86	100.000	Peromyscus_maniculatus_bairdii
ENSMAUG00000019737	-	100	97.297	ENSPLAG00000023932	snrpf	87	97.297	Poecilia_latipinna
ENSMAUG00000019737	-	100	97.297	ENSPMEG00000003377	snrpf	87	97.297	Poecilia_mexicana
ENSMAUG00000019737	-	100	97.297	ENSPREG00000022635	snrpf	85	97.297	Poecilia_reticulata
ENSMAUG00000019737	-	100	100.000	ENSPPYG00000004847	-	86	100.000	Pongo_abelii
ENSMAUG00000019737	-	100	100.000	ENSPCOG00000023833	-	86	100.000	Propithecus_coquereli
ENSMAUG00000019737	-	100	100.000	ENSPVAG00000009036	SNRPF	86	100.000	Pteropus_vampyrus
ENSMAUG00000019737	-	100	97.297	ENSPNYG00000021712	snrpf	87	97.297	Pundamilia_nyererei
ENSMAUG00000019737	-	85	95.238	ENSPNAG00000019117	snrpf	74	95.238	Pygocentrus_nattereri
ENSMAUG00000019737	-	100	100.000	ENSRNOG00000005556	Snrpf	86	100.000	Rattus_norvegicus
ENSMAUG00000019737	-	85	96.825	ENSRBIG00000030414	-	73	96.825	Rhinopithecus_bieti
ENSMAUG00000019737	-	85	96.825	ENSRROG00000021975	-	73	96.825	Rhinopithecus_roxellana
ENSMAUG00000019737	-	82	56.452	YPR182W	SMX3	72	56.452	Saccharomyces_cerevisiae
ENSMAUG00000019737	-	85	84.127	ENSSBOG00000032297	-	71	84.127	Saimiri_boliviensis_boliviensis
ENSMAUG00000019737	-	100	98.649	ENSSBOG00000012868	-	86	98.649	Saimiri_boliviensis_boliviensis
ENSMAUG00000019737	-	100	100.000	ENSSBOG00000036179	-	86	100.000	Saimiri_boliviensis_boliviensis
ENSMAUG00000019737	-	89	81.818	ENSSBOG00000027638	-	76	81.818	Saimiri_boliviensis_boliviensis
ENSMAUG00000019737	-	100	100.000	ENSSHAG00000012294	SNRPF	67	100.000	Sarcophilus_harrisii
ENSMAUG00000019737	-	72	96.226	ENSSFOG00015021523	snrpf	79	96.226	Scleropages_formosus
ENSMAUG00000019737	-	85	95.238	ENSSMAG00000005533	snrpf	72	95.238	Scophthalmus_maximus
ENSMAUG00000019737	-	72	96.226	ENSSDUG00000016283	snrpf	63	96.226	Seriola_dumerili
ENSMAUG00000019737	-	100	97.297	ENSSLDG00000005119	snrpf	86	97.297	Seriola_lalandi_dorsalis
ENSMAUG00000019737	-	92	75.000	ENSSLDG00000003885	-	76	79.032	Seriola_lalandi_dorsalis
ENSMAUG00000019737	-	100	100.000	ENSSPUG00000014590	-	87	100.000	Sphenodon_punctatus
ENSMAUG00000019737	-	100	97.297	ENSSPAG00000003283	snrpf	84	97.297	Stegastes_partitus
ENSMAUG00000019737	-	100	100.000	ENSSSCG00000000895	SNRPF	86	100.000	Sus_scrofa
ENSMAUG00000019737	-	78	94.828	ENSTRUG00000014956	snrpf	84	94.828	Takifugu_rubripes
ENSMAUG00000019737	-	85	95.238	ENSTNIG00000012672	snrpf	73	95.238	Tetraodon_nigroviridis
ENSMAUG00000019737	-	85	65.079	ENSTTRG00000006070	SNRPF	73	65.079	Tursiops_truncatus
ENSMAUG00000019737	-	100	100.000	ENSUAMG00000008176	-	86	100.000	Ursus_americanus
ENSMAUG00000019737	-	100	86.486	ENSUAMG00000001101	-	74	88.889	Ursus_americanus
ENSMAUG00000019737	-	85	88.889	ENSUMAG00000006177	-	74	88.889	Ursus_maritimus
ENSMAUG00000019737	-	100	100.000	ENSUMAG00000003528	-	86	100.000	Ursus_maritimus
ENSMAUG00000019737	-	100	100.000	ENSVPAG00000008712	-	86	100.000	Vicugna_pacos
ENSMAUG00000019737	-	89	90.909	ENSVVUG00000023821	-	81	90.476	Vulpes_vulpes
ENSMAUG00000019737	-	85	70.769	ENSXETG00000021630	snrpf	75	67.692	Xenopus_tropicalis
ENSMAUG00000019737	-	100	97.297	ENSXCOG00000013860	snrpf	85	97.297	Xiphophorus_couchianus
ENSMAUG00000019737	-	100	97.297	ENSXMAG00000015448	snrpf	87	97.297	Xiphophorus_maculatus