EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000020223 (Gene tree)
Gene ID: 101844410
Gene Symbol: Rab42
Alias: -
Full Name: RAB42%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 1392 bases
Position: chrKB708219.1:5389968-5391359
Accession: 101844410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000022929	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000026933	-	767	XM_005079538	ENSMAUP00000022929	216 (aa)	XP_005079595	A0A1U7R529

Gene Model

Click here to download ENSMAUG00000020223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000020223's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000020223	Rab42	81	38.333	ENSMAUG00000010219	Rab9b	86	38.333
ENSMAUG00000020223	Rab42	74	36.250	ENSMAUG00000011613	Rab5b	72	36.250
ENSMAUG00000020223	Rab42	69	39.073	ENSMAUG00000014025	Rab33a	62	39.073
ENSMAUG00000020223	Rab42	86	48.663	ENSMAUG00000011701	Rab39b	86	48.663
ENSMAUG00000020223	Rab42	86	32.979	ENSMAUG00000012455	Rab31	91	32.979
ENSMAUG00000020223	Rab42	82	40.217	ENSMAUG00000008179	Rab30	88	40.217
ENSMAUG00000020223	Rab42	80	39.080	ENSMAUG00000018551	Rab11a	78	39.080
ENSMAUG00000020223	Rab42	81	44.000	ENSMAUG00000012156	Rab1a	83	44.000
ENSMAUG00000020223	Rab42	79	32.759	ENSMAUG00000016039	Rab36	64	32.759
ENSMAUG00000020223	Rab42	76	42.169	ENSMAUG00000015713	Rab13	79	42.169
ENSMAUG00000020223	Rab42	77	38.012	ENSMAUG00000014030	Rab33b	73	38.012
ENSMAUG00000020223	Rab42	90	40.909	ENSMAUG00000017792	Rab2a	98	39.437
ENSMAUG00000020223	Rab42	66	41.667	ENSMAUG00000014779	Rab14	93	41.667
ENSMAUG00000020223	Rab42	74	37.500	ENSMAUG00000011242	-	72	37.500
ENSMAUG00000020223	Rab42	77	34.132	ENSMAUG00000008648	Rab22a	84	34.132
ENSMAUG00000020223	Rab42	95	32.683	ENSMAUG00000020698	-	92	32.683
ENSMAUG00000020223	Rab42	81	37.853	ENSMAUG00000021579	Rab11b	79	37.853
ENSMAUG00000020223	Rab42	63	34.307	ENSMAUG00000020006	Hras	86	31.548
ENSMAUG00000020223	Rab42	80	35.632	ENSMAUG00000008371	Rab12	65	34.171
ENSMAUG00000020223	Rab42	90	33.673	ENSMAUG00000015005	Rab5c	88	33.673
ENSMAUG00000020223	Rab42	63	35.036	ENSMAUG00000017232	Kras	87	32.143
ENSMAUG00000020223	Rab42	78	39.645	ENSMAUG00000009328	Rab35	92	39.267

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000020223	Rab42	100	79.263	ENSANAG00000035487	-	100	79.263	Aotus_nancymaae
ENSMAUG00000020223	Rab42	100	73.756	ENSBTAG00000021525	-	100	73.756	Bos_taurus
ENSMAUG00000020223	Rab42	99	61.751	ENSCPBG00000011245	RAB42	99	62.679	Chrysemys_picta_bellii
ENSMAUG00000020223	Rab42	100	96.296	ENSCGRG00001019426	Rab42	100	96.296	Cricetulus_griseus_chok1gshd
ENSMAUG00000020223	Rab42	100	79.263	ENSDORG00000023607	Rab42	100	79.263	Dipodomys_ordii
ENSMAUG00000020223	Rab42	100	78.539	ENSFCAG00000037124	-	100	78.995	Felis_catus
ENSMAUG00000020223	Rab42	99	60.930	ENSGAGG00000004921	RAB42	100	60.930	Gopherus_agassizii
ENSMAUG00000020223	Rab42	100	79.358	ENSSTOG00000000084	-	100	79.358	Ictidomys_tridecemlineatus
ENSMAUG00000020223	Rab42	100	78.539	ENSMICG00000029915	-	100	78.539	Microcebus_murinus
ENSMAUG00000020223	Rab42	100	92.593	ENSMOCG00000021639	Rab42	100	92.593	Microtus_ochrogaster
ENSMAUG00000020223	Rab42	99	65.741	ENSMODG00000023873	-	98	65.741	Monodelphis_domestica
ENSMAUG00000020223	Rab42	100	84.862	ENSNGAG00000015676	Rab42	100	84.862	Nannospalax_galili
ENSMAUG00000020223	Rab42	100	78.539	ENSOGAG00000006951	-	100	78.539	Otolemur_garnettii
ENSMAUG00000020223	Rab42	97	62.085	ENSPSIG00000006831	RAB42	92	62.085	Pelodiscus_sinensis
ENSMAUG00000020223	Rab42	100	79.909	ENSPCOG00000008605	-	100	79.909	Propithecus_coquereli
ENSMAUG00000020223	Rab42	96	74.163	ENSSARG00000007565	-	100	74.163	Sorex_araneus
ENSMAUG00000020223	Rab42	99	59.535	ENSSPUG00000010337	RAB42	99	59.535	Sphenodon_punctatus
ENSMAUG00000020223	Rab42	100	76.923	ENSSSCG00000030432	-	100	76.923	Sus_scrofa