EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000020253 (Gene tree)
Gene ID: 101826752
Gene Symbol: Ptcd2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 34417 bases
Position: chrKB708130.1:14057785-14092201
Accession: 101826752
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000022963	MRP-S27	PF10037.9	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000026968	-	1517	XM_013125633	ENSMAUP00000022963	318 (aa)	XP_012981087	A0A1U8CNR6

Gene Model

Click here to download ENSMAUG00000020253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000020253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000020253	Ptcd2	100	58.225	ENSG00000049883	PTCD2	95	69.935	Homo_sapiens
ENSMAUG00000020253	Ptcd2	96	37.772	ENSAPOG00000020682	ptcd2	93	43.774	Acanthochromis_polyacanthus
ENSMAUG00000020253	Ptcd2	100	57.180	ENSAMEG00000007194	PTCD2	99	57.180	Ailuropoda_melanoleuca
ENSMAUG00000020253	Ptcd2	89	37.427	ENSACIG00000002053	ptcd2	100	51.176	Amphilophus_citrinellus
ENSMAUG00000020253	Ptcd2	96	37.330	ENSAOCG00000006616	ptcd2	66	42.391	Amphiprion_ocellaris
ENSMAUG00000020253	Ptcd2	96	37.875	ENSAPEG00000022926	ptcd2	66	43.116	Amphiprion_percula
ENSMAUG00000020253	Ptcd2	92	45.198	ENSACAG00000009747	PTCD2	91	41.243	Anolis_carolinensis
ENSMAUG00000020253	Ptcd2	100	58.486	ENSANAG00000029353	PTCD2	99	58.486	Aotus_nancymaae
ENSMAUG00000020253	Ptcd2	90	38.177	ENSACLG00000027742	ptcd2	89	42.353	Astatotilapia_calliptera
ENSMAUG00000020253	Ptcd2	100	57.031	ENSBTAG00000014675	PTCD2	100	57.031	Bos_taurus
ENSMAUG00000020253	Ptcd2	100	57.702	ENSCJAG00000016364	PTCD2	99	57.702	Callithrix_jacchus
ENSMAUG00000020253	Ptcd2	100	55.875	ENSCAFG00000007982	PTCD2	90	55.875	Canis_familiaris
ENSMAUG00000020253	Ptcd2	89	55.780	ENSCAFG00020019147	PTCD2	97	55.780	Canis_lupus_dingo
ENSMAUG00000020253	Ptcd2	100	58.594	ENSCHIG00000017118	PTCD2	100	58.594	Capra_hircus
ENSMAUG00000020253	Ptcd2	100	54.047	ENSCPOG00000040168	PTCD2	100	54.047	Cavia_porcellus
ENSMAUG00000020253	Ptcd2	100	57.702	ENSCCAG00000029389	-	99	57.702	Cebus_capucinus
ENSMAUG00000020253	Ptcd2	77	57.576	ENSCCAG00000021996	-	95	57.576	Cebus_capucinus
ENSMAUG00000020253	Ptcd2	100	58.225	ENSCATG00000019069	PTCD2	100	58.225	Cercocebus_atys
ENSMAUG00000020253	Ptcd2	97	58.491	ENSCLAG00000000072	PTCD2	97	58.491	Chinchilla_lanigera
ENSMAUG00000020253	Ptcd2	100	57.963	ENSCSAG00000015623	PTCD2	100	57.963	Chlorocebus_sabaeus
ENSMAUG00000020253	Ptcd2	89	71.765	ENSCHOG00000010634	PTCD2	82	71.765	Choloepus_hoffmanni
ENSMAUG00000020253	Ptcd2	93	50.779	ENSCPBG00000000216	PTCD2	91	50.779	Chrysemys_picta_bellii
ENSMAUG00000020253	Ptcd2	100	56.919	ENSCANG00000035636	PTCD2	99	56.919	Colobus_angolensis_palliatus
ENSMAUG00000020253	Ptcd2	100	72.703	ENSCGRG00001015289	Ptcd2	84	72.703	Cricetulus_griseus_chok1gshd
ENSMAUG00000020253	Ptcd2	100	72.703	ENSCGRG00000006193	Ptcd2	84	72.703	Cricetulus_griseus_crigri
ENSMAUG00000020253	Ptcd2	96	35.422	ENSCVAG00000001285	ptcd2	91	47.917	Cyprinodon_variegatus
ENSMAUG00000020253	Ptcd2	100	55.614	ENSDNOG00000008719	PTCD2	100	55.614	Dasypus_novemcinctus
ENSMAUG00000020253	Ptcd2	100	59.690	ENSDORG00000004921	Ptcd2	100	59.690	Dipodomys_ordii
ENSMAUG00000020253	Ptcd2	100	51.302	ENSETEG00000016542	PTCD2	99	51.302	Echinops_telfairi
ENSMAUG00000020253	Ptcd2	100	58.901	ENSEASG00005018038	PTCD2	100	58.901	Equus_asinus_asinus
ENSMAUG00000020253	Ptcd2	100	58.901	ENSECAG00000007022	PTCD2	98	58.901	Equus_caballus
ENSMAUG00000020253	Ptcd2	100	53.525	ENSEEUG00000014031	PTCD2	99	53.525	Erinaceus_europaeus
ENSMAUG00000020253	Ptcd2	91	38.701	ENSELUG00000003584	ptcd2	92	38.701	Esox_lucius
ENSMAUG00000020253	Ptcd2	95	52.329	ENSFCAG00000045432	PTCD2	78	52.329	Felis_catus
ENSMAUG00000020253	Ptcd2	83	39.144	ENSFALG00000010299	PTCD2	99	39.144	Ficedula_albicollis
ENSMAUG00000020253	Ptcd2	100	55.352	ENSFDAG00000018461	PTCD2	100	55.352	Fukomys_damarensis
ENSMAUG00000020253	Ptcd2	90	37.500	ENSGMOG00000003637	ptcd2	91	37.500	Gadus_morhua
ENSMAUG00000020253	Ptcd2	92	39.831	ENSGALG00000038260	PTCD2	93	39.831	Gallus_gallus
ENSMAUG00000020253	Ptcd2	93	47.354	ENSGAGG00000021952	PTCD2	92	47.354	Gopherus_agassizii
ENSMAUG00000020253	Ptcd2	100	54.830	ENSGGOG00000010695	PTCD2	99	54.308	Gorilla_gorilla
ENSMAUG00000020253	Ptcd2	90	38.177	ENSHBUG00000009191	ptcd2	89	41.961	Haplochromis_burtoni
ENSMAUG00000020253	Ptcd2	100	55.091	ENSHGLG00000001234	PTCD2	100	55.091	Heterocephalus_glaber_female
ENSMAUG00000020253	Ptcd2	100	55.091	ENSHGLG00100015419	PTCD2	100	55.091	Heterocephalus_glaber_male
ENSMAUG00000020253	Ptcd2	94	47.297	ENSHCOG00000001703	ptcd2	92	47.297	Hippocampus_comes
ENSMAUG00000020253	Ptcd2	83	35.780	ENSIPUG00000006080	ptcd2	91	36.390	Ictalurus_punctatus
ENSMAUG00000020253	Ptcd2	99	58.005	ENSSTOG00000006596	PTCD2	99	58.005	Ictidomys_tridecemlineatus
ENSMAUG00000020253	Ptcd2	100	59.530	ENSJJAG00000024388	Ptcd2	100	59.530	Jaculus_jaculus
ENSMAUG00000020253	Ptcd2	97	36.290	ENSLBEG00000024871	ptcd2	50	51.531	Labrus_bergylta
ENSMAUG00000020253	Ptcd2	100	41.885	ENSLOCG00000011122	ptcd2	53	59.709	Lepisosteus_oculatus
ENSMAUG00000020253	Ptcd2	77	74.038	ENSLAFG00000004115	PTCD2	80	74.038	Loxodonta_africana
ENSMAUG00000020253	Ptcd2	100	57.963	ENSMFAG00000031516	PTCD2	99	57.963	Macaca_fascicularis
ENSMAUG00000020253	Ptcd2	100	57.441	ENSMNEG00000007537	PTCD2	100	57.441	Macaca_nemestrina
ENSMAUG00000020253	Ptcd2	100	58.486	ENSMLEG00000031093	PTCD2	99	58.486	Mandrillus_leucophaeus
ENSMAUG00000020253	Ptcd2	95	39.452	ENSMAMG00000018529	ptcd2	94	47.881	Mastacembelus_armatus
ENSMAUG00000020253	Ptcd2	90	38.177	ENSMZEG00005003625	ptcd2	89	42.353	Maylandia_zebra
ENSMAUG00000020253	Ptcd2	90	40.517	ENSMGAG00000005033	PTCD2	100	40.517	Meleagris_gallopavo
ENSMAUG00000020253	Ptcd2	100	59.008	ENSMICG00000004535	PTCD2	99	59.008	Microcebus_murinus
ENSMAUG00000020253	Ptcd2	100	71.129	ENSMOCG00000019985	Ptcd2	100	71.129	Microtus_ochrogaster
ENSMAUG00000020253	Ptcd2	95	44.231	ENSMODG00000001695	PTCD2	93	44.231	Monodelphis_domestica
ENSMAUG00000020253	Ptcd2	96	35.967	ENSMALG00000022372	ptcd2	72	39.865	Monopterus_albus
ENSMAUG00000020253	Ptcd2	100	65.092	MGP_CAROLIEiJ_G0018829	Ptcd2	100	65.092	Mus_caroli
ENSMAUG00000020253	Ptcd2	100	64.567	ENSMUSG00000021650	Ptcd2	100	64.567	Mus_musculus
ENSMAUG00000020253	Ptcd2	100	67.192	MGP_PahariEiJ_G0015904	Ptcd2	100	67.192	Mus_pahari
ENSMAUG00000020253	Ptcd2	100	60.995	MGP_SPRETEiJ_G0019711	Ptcd2	100	60.995	Mus_spretus
ENSMAUG00000020253	Ptcd2	97	58.760	ENSMPUG00000014401	PTCD2	97	58.760	Mustela_putorius_furo
ENSMAUG00000020253	Ptcd2	100	58.290	ENSMLUG00000007374	PTCD2	99	58.290	Myotis_lucifugus
ENSMAUG00000020253	Ptcd2	100	58.747	ENSNGAG00000005027	Ptcd2	100	58.747	Nannospalax_galili
ENSMAUG00000020253	Ptcd2	90	38.462	ENSNBRG00000008174	ptcd2	91	42.745	Neolamprologus_brichardi
ENSMAUG00000020253	Ptcd2	84	38.650	ENSNBRG00000000092	-	100	41.667	Neolamprologus_brichardi
ENSMAUG00000020253	Ptcd2	100	56.397	ENSNLEG00000004516	PTCD2	99	56.397	Nomascus_leucogenys
ENSMAUG00000020253	Ptcd2	67	72.662	ENSMEUG00000014012	-	56	72.662	Notamacropus_eugenii
ENSMAUG00000020253	Ptcd2	100	54.569	ENSOPRG00000007290	PTCD2	99	54.569	Ochotona_princeps
ENSMAUG00000020253	Ptcd2	79	42.745	ENSONIG00000011269	ptcd2	72	42.745	Oreochromis_niloticus
ENSMAUG00000020253	Ptcd2	95	56.164	ENSOCUG00000007970	PTCD2	100	56.136	Oryctolagus_cuniculus
ENSMAUG00000020253	Ptcd2	89	46.330	ENSORLG00000003851	ptcd2	88	46.330	Oryzias_latipes
ENSMAUG00000020253	Ptcd2	89	45.872	ENSORLG00020009823	ptcd2	90	45.872	Oryzias_latipes_hni
ENSMAUG00000020253	Ptcd2	90	51.429	ENSORLG00015016777	ptcd2	99	51.429	Oryzias_latipes_hsok
ENSMAUG00000020253	Ptcd2	93	36.066	ENSOMEG00000012396	ptcd2	86	36.066	Oryzias_melastigma
ENSMAUG00000020253	Ptcd2	100	53.003	ENSOGAG00000008390	PTCD2	99	53.003	Otolemur_garnettii
ENSMAUG00000020253	Ptcd2	100	58.594	ENSOARG00000005087	PTCD2	99	58.594	Ovis_aries
ENSMAUG00000020253	Ptcd2	100	54.830	ENSPPAG00000028480	PTCD2	99	54.308	Pan_paniscus
ENSMAUG00000020253	Ptcd2	100	54.569	ENSPTRG00000016968	PTCD2	99	54.047	Pan_troglodytes
ENSMAUG00000020253	Ptcd2	89	58.551	ENSPANG00000006611	PTCD2	89	58.551	Papio_anubis
ENSMAUG00000020253	Ptcd2	92	39.326	ENSPKIG00000019896	ptcd2	93	39.326	Paramormyrops_kingsleyae
ENSMAUG00000020253	Ptcd2	58	65.405	ENSPSIG00000014559	PTCD2	57	65.405	Pelodiscus_sinensis
ENSMAUG00000020253	Ptcd2	100	68.912	ENSPEMG00000000884	Ptcd2	100	68.912	Peromyscus_maniculatus_bairdii
ENSMAUG00000020253	Ptcd2	96	37.330	ENSPLAG00000010456	ptcd2	93	37.330	Poecilia_latipinna
ENSMAUG00000020253	Ptcd2	96	37.057	ENSPREG00000021797	ptcd2	91	37.057	Poecilia_reticulata
ENSMAUG00000020253	Ptcd2	100	48.042	ENSPPYG00000015543	PTCD2	99	48.042	Pongo_abelii
ENSMAUG00000020253	Ptcd2	72	58.639	ENSPCAG00000006806	PTCD2	93	58.639	Procavia_capensis
ENSMAUG00000020253	Ptcd2	100	54.830	ENSPVAG00000010935	PTCD2	99	54.830	Pteropus_vampyrus
ENSMAUG00000020253	Ptcd2	90	38.177	ENSPNYG00000003122	ptcd2	89	42.353	Pundamilia_nyererei
ENSMAUG00000020253	Ptcd2	100	65.092	ENSRNOG00000028403	Ptcd2	100	65.092	Rattus_norvegicus
ENSMAUG00000020253	Ptcd2	100	53.525	ENSRBIG00000032929	PTCD2	99	53.525	Rhinopithecus_bieti
ENSMAUG00000020253	Ptcd2	100	57.963	ENSRROG00000000080	PTCD2	100	57.963	Rhinopithecus_roxellana
ENSMAUG00000020253	Ptcd2	100	57.963	ENSSBOG00000018911	PTCD2	100	57.963	Saimiri_boliviensis_boliviensis
ENSMAUG00000020253	Ptcd2	93	44.972	ENSSHAG00000003833	PTCD2	93	44.972	Sarcophilus_harrisii
ENSMAUG00000020253	Ptcd2	90	37.249	ENSSFOG00015015415	ptcd2	91	54.857	Scleropages_formosus
ENSMAUG00000020253	Ptcd2	90	37.429	ENSSMAG00000010350	ptcd2	91	49.289	Scophthalmus_maximus
ENSMAUG00000020253	Ptcd2	90	38.920	ENSSDUG00000008142	ptcd2	87	48.402	Seriola_dumerili
ENSMAUG00000020253	Ptcd2	90	38.920	ENSSLDG00000015284	ptcd2	91	48.402	Seriola_lalandi_dorsalis
ENSMAUG00000020253	Ptcd2	77	74.038	ENSSARG00000004983	PTCD2	79	74.038	Sorex_araneus
ENSMAUG00000020253	Ptcd2	92	41.854	ENSSPUG00000000176	PTCD2	90	41.854	Sphenodon_punctatus
ENSMAUG00000020253	Ptcd2	96	37.875	ENSSPAG00000008591	ptcd2	91	37.875	Stegastes_partitus
ENSMAUG00000020253	Ptcd2	100	54.593	ENSSSCG00000016975	PTCD2	90	54.593	Sus_scrofa
ENSMAUG00000020253	Ptcd2	89	39.130	ENSTGUG00000005705	PTCD2	99	39.130	Taeniopygia_guttata
ENSMAUG00000020253	Ptcd2	100	54.830	ENSTBEG00000016559	PTCD2	99	54.830	Tupaia_belangeri
ENSMAUG00000020253	Ptcd2	100	58.656	ENSTTRG00000011851	PTCD2	99	58.656	Tursiops_truncatus
ENSMAUG00000020253	Ptcd2	97	58.491	ENSUAMG00000007583	PTCD2	87	58.491	Ursus_americanus
ENSMAUG00000020253	Ptcd2	97	57.412	ENSUMAG00000007666	PTCD2	97	57.412	Ursus_maritimus
ENSMAUG00000020253	Ptcd2	100	55.208	ENSVPAG00000009597	PTCD2	99	55.208	Vicugna_pacos
ENSMAUG00000020253	Ptcd2	100	56.136	ENSVVUG00000007299	-	100	56.136	Vulpes_vulpes
ENSMAUG00000020253	Ptcd2	90	42.898	ENSXETG00000031652	PTCD2	92	42.898	Xenopus_tropicalis
ENSMAUG00000020253	Ptcd2	96	37.057	ENSXMAG00000005940	ptcd2	84	37.057	Xiphophorus_maculatus