EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000020287 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 3629 bases
Position: chrKB708206.1:65482-69110
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000023020	LSM	PF01423.22	7.6e-10	1	1
ENSMAUP00000023016	LSM	PF01423.22	2.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000027022	-	225	-	ENSMAUP00000023016	74 (aa)	-	-
ENSMAUT00000027026	-	273	-	ENSMAUP00000023020	90 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000020287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000020287's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000020287	-	100	82.432	ENSMAUG00000015721	-	75	84.722
ENSMAUG00000020287	-	100	68.919	ENSMAUG00000015356	-	84	63.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000020287	-	100	90.541	ENSG00000128534	LSM8	99	90.541	Homo_sapiens
ENSMAUG00000020287	-	100	87.838	ENSAPOG00000008649	lsm8	75	90.278	Acanthochromis_polyacanthus
ENSMAUG00000020287	-	100	90.541	ENSAMEG00000001162	LSM8	75	93.056	Ailuropoda_melanoleuca
ENSMAUG00000020287	-	100	87.838	ENSACIG00000014694	lsm8	99	87.838	Amphilophus_citrinellus
ENSMAUG00000020287	-	100	87.838	ENSAOCG00000013926	lsm8	75	90.278	Amphiprion_ocellaris
ENSMAUG00000020287	-	100	87.838	ENSAPEG00000023502	lsm8	75	90.278	Amphiprion_percula
ENSMAUG00000020287	-	100	87.838	ENSATEG00000023432	lsm8	99	87.838	Anabas_testudineus
ENSMAUG00000020287	-	100	89.189	ENSAPLG00000005115	LSM8	73	91.667	Anas_platyrhynchos
ENSMAUG00000020287	-	100	91.892	ENSANAG00000027771	LSM8	100	91.892	Aotus_nancymaae
ENSMAUG00000020287	-	100	87.838	ENSACLG00000011253	lsm8	75	90.278	Astatotilapia_calliptera
ENSMAUG00000020287	-	100	89.189	ENSAMXG00000042902	lsm8	75	91.667	Astyanax_mexicanus
ENSMAUG00000020287	-	100	90.541	ENSBTAG00000012649	LSM8	75	93.056	Bos_taurus
ENSMAUG00000020287	-	93	53.623	WBGene00003082	lsm-8	80	51.282	Caenorhabditis_elegans
ENSMAUG00000020287	-	100	91.892	ENSCJAG00000046406	LSM8	100	91.892	Callithrix_jacchus
ENSMAUG00000020287	-	99	90.411	ENSCAFG00000016459	LSM8	72	92.958	Canis_familiaris
ENSMAUG00000020287	-	100	90.541	ENSCAFG00020007643	-	75	93.056	Canis_lupus_dingo
ENSMAUG00000020287	-	100	78.378	ENSCAFG00020012800	-	56	80.556	Canis_lupus_dingo
ENSMAUG00000020287	-	100	90.541	ENSCHIG00000014201	LSM8	77	93.056	Capra_hircus
ENSMAUG00000020287	-	100	90.541	ENSTSYG00000032434	LSM8	75	93.056	Carlito_syrichta
ENSMAUG00000020287	-	100	91.892	ENSCAPG00000008253	LSM8	100	91.892	Cavia_aperea
ENSMAUG00000020287	-	100	90.541	ENSCPOG00000035673	LSM8	75	93.056	Cavia_porcellus
ENSMAUG00000020287	-	100	91.892	ENSCCAG00000021329	LSM8	100	91.892	Cebus_capucinus
ENSMAUG00000020287	-	100	91.892	ENSCATG00000045302	LSM8	100	91.892	Cercocebus_atys
ENSMAUG00000020287	-	100	90.541	ENSCLAG00000003726	LSM8	75	93.056	Chinchilla_lanigera
ENSMAUG00000020287	-	100	90.541	ENSCSAG00000010802	-	75	93.056	Chlorocebus_sabaeus
ENSMAUG00000020287	-	100	87.838	ENSCSAG00000019007	-	75	90.278	Chlorocebus_sabaeus
ENSMAUG00000020287	-	100	90.541	ENSCPBG00000008154	LSM8	76	90.541	Chrysemys_picta_bellii
ENSMAUG00000020287	-	100	70.270	ENSCING00000024877	-	77	70.270	Ciona_intestinalis
ENSMAUG00000020287	-	100	91.892	ENSCANG00000040728	LSM8	100	91.892	Colobus_angolensis_palliatus
ENSMAUG00000020287	-	100	90.541	ENSCGRG00001000450	Lsm8	75	93.056	Cricetulus_griseus_chok1gshd
ENSMAUG00000020287	-	100	90.541	ENSCGRG00000005587	Lsm8	85	93.056	Cricetulus_griseus_crigri
ENSMAUG00000020287	-	97	88.889	ENSCSEG00000004164	lsm8	87	86.076	Cynoglossus_semilaevis
ENSMAUG00000020287	-	100	86.486	ENSCVAG00000020547	lsm8	75	88.889	Cyprinodon_variegatus
ENSMAUG00000020287	-	100	87.838	ENSDARG00000091656	lsm8	75	90.278	Danio_rerio
ENSMAUG00000020287	-	100	90.541	ENSDNOG00000034613	LSM8	75	93.056	Dasypus_novemcinctus
ENSMAUG00000020287	-	100	90.541	ENSDORG00000027868	Lsm8	75	93.056	Dipodomys_ordii
ENSMAUG00000020287	-	100	64.865	FBgn0035271	CG2021	78	66.216	Drosophila_melanogaster
ENSMAUG00000020287	-	100	89.189	ENSETEG00000011594	LSM8	75	91.667	Echinops_telfairi
ENSMAUG00000020287	-	100	86.486	ENSEBUG00000012017	lsm8	100	86.486	Eptatretus_burgeri
ENSMAUG00000020287	-	100	90.541	ENSECAG00000024025	LSM8	71	93.056	Equus_caballus
ENSMAUG00000020287	-	100	86.486	ENSELUG00000010138	lsm8	75	88.889	Esox_lucius
ENSMAUG00000020287	-	89	65.152	ENSFCAG00000044794	-	63	67.188	Felis_catus
ENSMAUG00000020287	-	100	90.541	ENSFCAG00000036620	-	75	93.056	Felis_catus
ENSMAUG00000020287	-	100	89.189	ENSFALG00000010023	LSM8	75	91.667	Ficedula_albicollis
ENSMAUG00000020287	-	100	90.541	ENSFDAG00000019530	LSM8	75	93.056	Fukomys_damarensis
ENSMAUG00000020287	-	100	87.838	ENSFHEG00000013729	lsm8	75	90.278	Fundulus_heteroclitus
ENSMAUG00000020287	-	100	89.189	ENSGALG00000009110	LSM8	75	91.667	Gallus_gallus
ENSMAUG00000020287	-	100	86.486	ENSGAFG00000001135	lsm8	75	88.889	Gambusia_affinis
ENSMAUG00000020287	-	100	90.541	ENSGAGG00000017366	LSM8	75	93.056	Gopherus_agassizii
ENSMAUG00000020287	-	100	90.541	ENSGGOG00000041883	LSM8	75	93.056	Gorilla_gorilla
ENSMAUG00000020287	-	100	87.838	ENSHBUG00000003646	lsm8	75	90.278	Haplochromis_burtoni
ENSMAUG00000020287	-	62	86.957	ENSHGLG00000001988	-	64	90.909	Heterocephalus_glaber_female
ENSMAUG00000020287	-	97	87.500	ENSHGLG00000019782	-	75	87.500	Heterocephalus_glaber_female
ENSMAUG00000020287	-	100	86.486	ENSHGLG00100012166	-	75	88.889	Heterocephalus_glaber_male
ENSMAUG00000020287	-	95	90.000	ENSHGLG00100003934	-	68	92.647	Heterocephalus_glaber_male
ENSMAUG00000020287	-	100	86.486	ENSHCOG00000005037	lsm8	75	88.889	Hippocampus_comes
ENSMAUG00000020287	-	100	89.189	ENSIPUG00000019811	NAA38	75	91.667	Ictalurus_punctatus
ENSMAUG00000020287	-	100	77.027	ENSSTOG00000034801	-	67	79.167	Ictidomys_tridecemlineatus
ENSMAUG00000020287	-	100	90.541	ENSSTOG00000009039	LSM8	97	79.775	Ictidomys_tridecemlineatus
ENSMAUG00000020287	-	100	90.541	ENSJJAG00000009031	Lsm8	74	93.056	Jaculus_jaculus
ENSMAUG00000020287	-	100	87.838	ENSKMAG00000018983	lsm8	75	90.278	Kryptolebias_marmoratus
ENSMAUG00000020287	-	100	86.486	ENSLACG00000010231	LSM8	75	88.889	Latimeria_chalumnae
ENSMAUG00000020287	-	100	87.838	ENSLOCG00000015580	lsm8	75	90.278	Lepisosteus_oculatus
ENSMAUG00000020287	-	100	90.541	ENSLAFG00000011242	LSM8	74	93.056	Loxodonta_africana
ENSMAUG00000020287	-	100	91.892	ENSMFAG00000035798	LSM8	100	91.892	Macaca_fascicularis
ENSMAUG00000020287	-	100	86.486	ENSMFAG00000013044	-	75	88.889	Macaca_fascicularis
ENSMAUG00000020287	-	100	91.892	ENSMMUG00000046401	LSM8	100	91.892	Macaca_mulatta
ENSMAUG00000020287	-	100	86.486	ENSMNEG00000011141	-	99	86.486	Macaca_nemestrina
ENSMAUG00000020287	-	100	91.892	ENSMNEG00000036764	-	100	91.892	Macaca_nemestrina
ENSMAUG00000020287	-	100	91.892	ENSMLEG00000035828	-	100	91.892	Mandrillus_leucophaeus
ENSMAUG00000020287	-	100	75.676	ENSMLEG00000039324	-	77	73.684	Mandrillus_leucophaeus
ENSMAUG00000020287	-	100	87.838	ENSMAMG00000018839	lsm8	99	87.838	Mastacembelus_armatus
ENSMAUG00000020287	-	100	87.838	ENSMZEG00005019138	lsm8	75	90.278	Maylandia_zebra
ENSMAUG00000020287	-	100	89.189	ENSMGAG00000008808	LSM8	75	91.667	Meleagris_gallopavo
ENSMAUG00000020287	-	100	90.541	ENSMICG00000042730	LSM8	75	93.056	Microcebus_murinus
ENSMAUG00000020287	-	100	90.541	ENSMOCG00000001688	Lsm8	75	93.056	Microtus_ochrogaster
ENSMAUG00000020287	-	100	87.838	ENSMMOG00000006046	lsm8	99	87.838	Mola_mola
ENSMAUG00000020287	-	95	80.556	ENSMODG00000015729	LSM8	92	80.556	Monodelphis_domestica
ENSMAUG00000020287	-	100	87.838	ENSMALG00000000405	lsm8	75	90.278	Monopterus_albus
ENSMAUG00000020287	-	100	90.541	MGP_CAROLIEiJ_G0028125	-	100	73.000	Mus_caroli
ENSMAUG00000020287	-	100	90.541	ENSMUSG00000044155	Lsm8	100	73.000	Mus_musculus
ENSMAUG00000020287	-	100	90.541	MGP_PahariEiJ_G0021881	Lsm8	99	90.541	Mus_pahari
ENSMAUG00000020287	-	100	90.541	MGP_SPRETEiJ_G0029125	-	100	73.000	Mus_spretus
ENSMAUG00000020287	-	100	90.541	ENSMLUG00000006837	-	75	93.056	Myotis_lucifugus
ENSMAUG00000020287	-	100	89.189	ENSMLUG00000027762	-	75	91.667	Myotis_lucifugus
ENSMAUG00000020287	-	100	90.541	ENSNGAG00000016554	Lsm8	75	93.056	Nannospalax_galili
ENSMAUG00000020287	-	100	87.838	ENSNBRG00000014441	lsm8	75	90.278	Neolamprologus_brichardi
ENSMAUG00000020287	-	100	90.541	ENSNLEG00000011768	LSM8	75	93.056	Nomascus_leucogenys
ENSMAUG00000020287	-	95	81.429	ENSMEUG00000007801	LSM8	73	81.429	Notamacropus_eugenii
ENSMAUG00000020287	-	100	90.541	ENSOPRG00000014809	LSM8	85	93.056	Ochotona_princeps
ENSMAUG00000020287	-	100	90.541	ENSODEG00000000418	-	75	93.056	Octodon_degus
ENSMAUG00000020287	-	86	73.438	ENSODEG00000020290	-	72	75.806	Octodon_degus
ENSMAUG00000020287	-	100	90.541	ENSOANG00000014536	LSM8	75	93.056	Ornithorhynchus_anatinus
ENSMAUG00000020287	-	100	90.541	ENSOCUG00000017359	LSM8	74	93.056	Oryctolagus_cuniculus
ENSMAUG00000020287	-	97	90.278	ENSORLG00000017432	lsm8	79	89.189	Oryzias_latipes
ENSMAUG00000020287	-	97	90.278	ENSORLG00020004376	lsm8	79	89.189	Oryzias_latipes_hni
ENSMAUG00000020287	-	100	87.838	ENSORLG00015003757	lsm8	75	90.278	Oryzias_latipes_hsok
ENSMAUG00000020287	-	93	89.855	ENSOMEG00000022509	lsm8	82	89.189	Oryzias_melastigma
ENSMAUG00000020287	-	100	90.541	ENSOGAG00000013377	LSM8	75	93.056	Otolemur_garnettii
ENSMAUG00000020287	-	100	90.541	ENSOARG00000017974	LSM8	75	93.056	Ovis_aries
ENSMAUG00000020287	-	100	90.541	ENSPPAG00000043228	-	99	90.541	Pan_paniscus
ENSMAUG00000020287	-	100	90.541	ENSPPRG00000006444	LSM8	75	93.056	Panthera_pardus
ENSMAUG00000020287	-	100	90.541	ENSPTIG00000004722	LSM8	75	93.056	Panthera_tigris_altaica
ENSMAUG00000020287	-	100	90.541	ENSPTRG00000046596	-	99	90.541	Pan_troglodytes
ENSMAUG00000020287	-	100	91.892	ENSPANG00000035470	-	100	91.892	Papio_anubis
ENSMAUG00000020287	-	100	86.486	ENSPANG00000019395	-	75	88.889	Papio_anubis
ENSMAUG00000020287	-	100	87.838	ENSPKIG00000006092	lsm8	73	90.278	Paramormyrops_kingsleyae
ENSMAUG00000020287	-	100	90.541	ENSPSIG00000017054	LSM8	99	90.541	Pelodiscus_sinensis
ENSMAUG00000020287	-	100	87.838	ENSPMGG00000016442	lsm8	99	87.838	Periophthalmus_magnuspinnatus
ENSMAUG00000020287	-	100	90.541	ENSPEMG00000009153	Lsm8	100	90.541	Peromyscus_maniculatus_bairdii
ENSMAUG00000020287	-	96	91.549	ENSPCIG00000021467	LSM8	73	94.203	Phascolarctos_cinereus
ENSMAUG00000020287	-	100	86.486	ENSPFOG00000012340	lsm8	75	88.889	Poecilia_formosa
ENSMAUG00000020287	-	100	86.486	ENSPLAG00000000516	lsm8	75	88.889	Poecilia_latipinna
ENSMAUG00000020287	-	100	86.486	ENSPMEG00000022567	lsm8	75	88.889	Poecilia_mexicana
ENSMAUG00000020287	-	99	80.000	ENSPREG00000005527	lsm8	72	80.000	Poecilia_reticulata
ENSMAUG00000020287	-	100	90.541	ENSPPYG00000017942	LSM8	75	93.056	Pongo_abelii
ENSMAUG00000020287	-	99	68.493	ENSPCOG00000017982	-	73	68.493	Propithecus_coquereli
ENSMAUG00000020287	-	100	90.541	ENSPCOG00000003309	-	75	93.056	Propithecus_coquereli
ENSMAUG00000020287	-	100	89.189	ENSPVAG00000000990	LSM8	85	91.667	Pteropus_vampyrus
ENSMAUG00000020287	-	100	87.838	ENSPNYG00000011448	lsm8	75	90.278	Pundamilia_nyererei
ENSMAUG00000020287	-	100	89.189	ENSPNAG00000010252	lsm8	75	91.667	Pygocentrus_nattereri
ENSMAUG00000020287	-	100	90.541	ENSRNOG00000058677	Lsm8	75	93.056	Rattus_norvegicus
ENSMAUG00000020287	-	100	91.892	ENSRBIG00000032851	LSM8	100	91.892	Rhinopithecus_bieti
ENSMAUG00000020287	-	100	91.892	ENSRROG00000039618	LSM8	100	91.892	Rhinopithecus_roxellana
ENSMAUG00000020287	-	100	91.892	ENSSBOG00000023223	LSM8	100	91.892	Saimiri_boliviensis_boliviensis
ENSMAUG00000020287	-	100	90.541	ENSSHAG00000018435	-	75	93.056	Sarcophilus_harrisii
ENSMAUG00000020287	-	100	86.486	ENSSFOG00015004412	lsm8	75	88.889	Scleropages_formosus
ENSMAUG00000020287	-	100	87.838	ENSSMAG00000009458	lsm8	99	87.838	Scophthalmus_maximus
ENSMAUG00000020287	-	100	87.838	ENSSDUG00000014702	lsm8	75	90.278	Seriola_dumerili
ENSMAUG00000020287	-	100	87.838	ENSSLDG00000016870	lsm8	99	87.838	Seriola_lalandi_dorsalis
ENSMAUG00000020287	-	97	93.056	ENSSARG00000009628	-	100	93.056	Sorex_araneus
ENSMAUG00000020287	-	100	90.541	ENSSPUG00000017419	LSM8	75	93.056	Sphenodon_punctatus
ENSMAUG00000020287	-	100	87.838	ENSSPAG00000021422	lsm8	75	90.278	Stegastes_partitus
ENSMAUG00000020287	-	100	90.541	ENSSSCG00000021652	LSM8	75	93.056	Sus_scrofa
ENSMAUG00000020287	-	100	87.838	ENSTGUG00000016823	-	75	90.278	Taeniopygia_guttata
ENSMAUG00000020287	-	100	89.189	ENSTGUG00000004730	-	75	91.667	Taeniopygia_guttata
ENSMAUG00000020287	-	100	87.838	ENSTRUG00000025192	lsm8	75	90.278	Takifugu_rubripes
ENSMAUG00000020287	-	100	87.838	ENSTNIG00000002864	lsm8	75	90.278	Tetraodon_nigroviridis
ENSMAUG00000020287	-	100	90.541	ENSTTRG00000001023	LSM8	75	93.056	Tursiops_truncatus
ENSMAUG00000020287	-	100	90.541	ENSUAMG00000006943	-	75	93.056	Ursus_americanus
ENSMAUG00000020287	-	100	90.541	ENSUMAG00000003073	LSM8	77	93.056	Ursus_maritimus
ENSMAUG00000020287	-	100	90.541	ENSVPAG00000001530	LSM8	75	93.056	Vicugna_pacos
ENSMAUG00000020287	-	100	87.838	ENSVVUG00000013248	-	99	77.778	Vulpes_vulpes
ENSMAUG00000020287	-	100	87.838	ENSXETG00000021829	lsm8	74	90.278	Xenopus_tropicalis
ENSMAUG00000020287	-	100	85.135	ENSXCOG00000012938	lsm8	76	87.500	Xiphophorus_couchianus
ENSMAUG00000020287	-	100	86.486	ENSXMAG00000025919	lsm8	75	88.889	Xiphophorus_maculatus