EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000020317 (Gene tree)
Gene ID: 101837511
Gene Symbol: Sf3a1
Alias: 1200014H24Rik|5930416L09Rik
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 36083 bases
Position: chrKB708142.1:22925508-22961590
Accession: 101837511
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000023086	PRP21_like_P	PF12230.8	6.5e-52	1	1
ENSMAUP00000023086	Surp	PF01805.20	2.2e-23	1	2
ENSMAUP00000023086	Surp	PF01805.20	2.2e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000027093	-	2277	XM_013112476	ENSMAUP00000023086	758 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000020317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000020317's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000020317	Sf3a1	94	94.945	ENSG00000099995	SF3A1	92	94.945	Homo_sapiens
ENSMAUG00000020317	Sf3a1	100	78.608	ENSAPOG00000020465	sf3a1	93	82.153	Acanthochromis_polyacanthus
ENSMAUG00000020317	Sf3a1	94	94.945	ENSAMEG00000007737	SF3A1	92	94.945	Ailuropoda_melanoleuca
ENSMAUG00000020317	Sf3a1	100	78.734	ENSACIG00000020672	sf3a1	93	82.289	Amphilophus_citrinellus
ENSMAUG00000020317	Sf3a1	100	78.382	ENSAOCG00000003060	sf3a1	93	81.880	Amphiprion_ocellaris
ENSMAUG00000020317	Sf3a1	100	78.508	ENSAPEG00000010735	sf3a1	93	82.016	Amphiprion_percula
ENSMAUG00000020317	Sf3a1	94	81.744	ENSATEG00000021201	sf3a1	92	81.880	Anabas_testudineus
ENSMAUG00000020317	Sf3a1	94	89.918	ENSAPLG00000009057	SF3A1	95	89.918	Anas_platyrhynchos
ENSMAUG00000020317	Sf3a1	100	80.864	ENSACAG00000009415	SF3A1	93	84.687	Anolis_carolinensis
ENSMAUG00000020317	Sf3a1	94	94.945	ENSANAG00000032045	SF3A1	92	94.945	Aotus_nancymaae
ENSMAUG00000020317	Sf3a1	100	78.327	ENSACLG00000012622	sf3a1	93	82.128	Astatotilapia_calliptera
ENSMAUG00000020317	Sf3a1	94	81.199	ENSAMXG00000005382	sf3a1	94	81.140	Astyanax_mexicanus
ENSMAUG00000020317	Sf3a1	94	95.219	ENSBTAG00000003390	SF3A1	92	95.219	Bos_taurus
ENSMAUG00000020317	Sf3a1	81	42.105	WBGene00004188	prp-21	84	41.071	Caenorhabditis_elegans
ENSMAUG00000020317	Sf3a1	94	95.082	ENSCJAG00000010370	SF3A1	92	95.082	Callithrix_jacchus
ENSMAUG00000020317	Sf3a1	94	94.945	ENSCAFG00000012559	SF3A1	92	94.945	Canis_familiaris
ENSMAUG00000020317	Sf3a1	94	94.945	ENSCAFG00020000838	SF3A1	92	94.945	Canis_lupus_dingo
ENSMAUG00000020317	Sf3a1	94	95.082	ENSCHIG00000018642	SF3A1	92	95.082	Capra_hircus
ENSMAUG00000020317	Sf3a1	94	95.355	ENSTSYG00000004739	SF3A1	92	95.355	Carlito_syrichta
ENSMAUG00000020317	Sf3a1	91	77.809	ENSCAPG00000015414	SF3A1	93	77.809	Cavia_aperea
ENSMAUG00000020317	Sf3a1	94	94.945	ENSCPOG00000014589	SF3A1	92	94.945	Cavia_porcellus
ENSMAUG00000020317	Sf3a1	94	94.945	ENSCCAG00000032006	SF3A1	92	94.945	Cebus_capucinus
ENSMAUG00000020317	Sf3a1	94	95.082	ENSCATG00000029241	SF3A1	92	95.082	Cercocebus_atys
ENSMAUG00000020317	Sf3a1	94	94.536	ENSCLAG00000006508	SF3A1	92	94.536	Chinchilla_lanigera
ENSMAUG00000020317	Sf3a1	94	95.082	ENSCSAG00000009470	SF3A1	92	95.082	Chlorocebus_sabaeus
ENSMAUG00000020317	Sf3a1	54	98.095	ENSCHOG00000005201	SF3A1	61	98.095	Choloepus_hoffmanni
ENSMAUG00000020317	Sf3a1	100	84.470	ENSCPBG00000007595	SF3A1	93	88.813	Chrysemys_picta_bellii
ENSMAUG00000020317	Sf3a1	94	47.715	ENSCSAVG00000005608	-	86	65.179	Ciona_savignyi
ENSMAUG00000020317	Sf3a1	94	95.082	ENSCANG00000033564	SF3A1	92	95.082	Colobus_angolensis_palliatus
ENSMAUG00000020317	Sf3a1	94	95.765	ENSCGRG00001008933	Sf3a1	92	95.765	Cricetulus_griseus_chok1gshd
ENSMAUG00000020317	Sf3a1	94	95.765	ENSCGRG00000006127	Sf3a1	92	95.765	Cricetulus_griseus_crigri
ENSMAUG00000020317	Sf3a1	94	79.728	ENSCSEG00000010792	sf3a1	93	79.456	Cynoglossus_semilaevis
ENSMAUG00000020317	Sf3a1	100	77.089	ENSCVAG00000004560	sf3a1	93	80.245	Cyprinodon_variegatus
ENSMAUG00000020317	Sf3a1	94	80.136	ENSDARG00000041887	sf3a1	93	80.544	Danio_rerio
ENSMAUG00000020317	Sf3a1	94	95.095	ENSDNOG00000010629	SF3A1	92	94.687	Dasypus_novemcinctus
ENSMAUG00000020317	Sf3a1	94	94.945	ENSDORG00000005613	Sf3a1	92	94.945	Dipodomys_ordii
ENSMAUG00000020317	Sf3a1	79	56.238	FBgn0266917	Sf3a1	79	54.651	Drosophila_melanogaster
ENSMAUG00000020317	Sf3a1	82	93.136	ENSETEG00000017194	SF3A1	91	92.980	Echinops_telfairi
ENSMAUG00000020317	Sf3a1	94	64.103	ENSEBUG00000001285	sf3a1	73	62.932	Eptatretus_burgeri
ENSMAUG00000020317	Sf3a1	94	95.355	ENSEASG00005010254	SF3A1	92	95.355	Equus_asinus_asinus
ENSMAUG00000020317	Sf3a1	94	95.355	ENSECAG00000023962	SF3A1	92	95.355	Equus_caballus
ENSMAUG00000020317	Sf3a1	74	93.443	ENSEEUG00000003159	SF3A1	83	93.443	Erinaceus_europaeus
ENSMAUG00000020317	Sf3a1	100	76.419	ENSELUG00000022578	sf3a1	93	79.647	Esox_lucius
ENSMAUG00000020317	Sf3a1	94	94.945	ENSFCAG00000011932	SF3A1	92	94.945	Felis_catus
ENSMAUG00000020317	Sf3a1	94	88.950	ENSFALG00000006944	SF3A1	93	89.359	Ficedula_albicollis
ENSMAUG00000020317	Sf3a1	94	94.945	ENSFDAG00000009560	SF3A1	92	94.945	Fukomys_damarensis
ENSMAUG00000020317	Sf3a1	100	78.354	ENSFHEG00000010866	sf3a1	93	81.471	Fundulus_heteroclitus
ENSMAUG00000020317	Sf3a1	100	75.032	ENSGMOG00000016024	sf3a1	93	76.892	Gadus_morhua
ENSMAUG00000020317	Sf3a1	94	89.905	ENSGALG00000007937	SF3A1	93	90.041	Gallus_gallus
ENSMAUG00000020317	Sf3a1	100	77.652	ENSGAFG00000009111	sf3a1	93	80.518	Gambusia_affinis
ENSMAUG00000020317	Sf3a1	100	76.263	ENSGACG00000011893	sf3a1	93	79.400	Gasterosteus_aculeatus
ENSMAUG00000020317	Sf3a1	96	84.058	ENSGAGG00000000762	SF3A1	92	88.429	Gopherus_agassizii
ENSMAUG00000020317	Sf3a1	94	94.945	ENSGGOG00000012631	SF3A1	92	94.945	Gorilla_gorilla
ENSMAUG00000020317	Sf3a1	100	78.580	ENSHBUG00000015795	sf3a1	93	82.128	Haplochromis_burtoni
ENSMAUG00000020317	Sf3a1	94	95.219	ENSHGLG00000007907	SF3A1	92	95.219	Heterocephalus_glaber_female
ENSMAUG00000020317	Sf3a1	94	95.219	ENSHGLG00100013799	SF3A1	92	95.219	Heterocephalus_glaber_male
ENSMAUG00000020317	Sf3a1	94	78.202	ENSHCOG00000015423	sf3a1	94	77.793	Hippocampus_comes
ENSMAUG00000020317	Sf3a1	94	78.397	ENSIPUG00000002470	sf3a1	94	78.668	Ictalurus_punctatus
ENSMAUG00000020317	Sf3a1	94	95.355	ENSSTOG00000013892	SF3A1	92	95.355	Ictidomys_tridecemlineatus
ENSMAUG00000020317	Sf3a1	94	95.355	ENSJJAG00000022566	Sf3a1	92	95.355	Jaculus_jaculus
ENSMAUG00000020317	Sf3a1	100	77.089	ENSKMAG00000002400	sf3a1	93	81.471	Kryptolebias_marmoratus
ENSMAUG00000020317	Sf3a1	100	76.709	ENSLBEG00000022974	sf3a1	93	79.837	Labrus_bergylta
ENSMAUG00000020317	Sf3a1	100	81.234	ENSLACG00000003565	SF3A1	93	84.647	Latimeria_chalumnae
ENSMAUG00000020317	Sf3a1	100	78.689	ENSLOCG00000008251	sf3a1	93	82.632	Lepisosteus_oculatus
ENSMAUG00000020317	Sf3a1	94	94.672	ENSLAFG00000000448	SF3A1	92	94.672	Loxodonta_africana
ENSMAUG00000020317	Sf3a1	99	56.730	ENSLAFG00000026032	-	92	59.079	Loxodonta_africana
ENSMAUG00000020317	Sf3a1	94	94.945	ENSMFAG00000031979	SF3A1	92	94.945	Macaca_fascicularis
ENSMAUG00000020317	Sf3a1	94	94.945	ENSMMUG00000005547	SF3A1	92	94.945	Macaca_mulatta
ENSMAUG00000020317	Sf3a1	94	94.809	ENSMNEG00000037229	SF3A1	92	94.809	Macaca_nemestrina
ENSMAUG00000020317	Sf3a1	94	95.082	ENSMLEG00000041908	SF3A1	92	95.082	Mandrillus_leucophaeus
ENSMAUG00000020317	Sf3a1	94	82.425	ENSMAMG00000006460	sf3a1	92	82.561	Mastacembelus_armatus
ENSMAUG00000020317	Sf3a1	100	78.327	ENSMZEG00005009633	sf3a1	93	82.128	Maylandia_zebra
ENSMAUG00000020317	Sf3a1	94	89.905	ENSMGAG00000001330	SF3A1	95	90.041	Meleagris_gallopavo
ENSMAUG00000020317	Sf3a1	94	94.672	ENSMICG00000010038	SF3A1	92	94.672	Microcebus_murinus
ENSMAUG00000020317	Sf3a1	94	96.038	ENSMOCG00000008438	Sf3a1	92	96.038	Microtus_ochrogaster
ENSMAUG00000020317	Sf3a1	100	75.443	ENSMMOG00000015588	sf3a1	93	78.610	Mola_mola
ENSMAUG00000020317	Sf3a1	94	93.443	ENSMODG00000009270	SF3A1	92	93.579	Monodelphis_domestica
ENSMAUG00000020317	Sf3a1	95	81.436	ENSMALG00000000148	sf3a1	99	81.880	Monopterus_albus
ENSMAUG00000020317	Sf3a1	94	95.355	MGP_CAROLIEiJ_G0016029	Sf3a1	92	95.355	Mus_caroli
ENSMAUG00000020317	Sf3a1	94	95.355	ENSMUSG00000002129	Sf3a1	92	95.355	Mus_musculus
ENSMAUG00000020317	Sf3a1	94	95.355	MGP_PahariEiJ_G0016862	Sf3a1	92	95.355	Mus_pahari
ENSMAUG00000020317	Sf3a1	94	95.355	MGP_SPRETEiJ_G0016870	Sf3a1	92	95.355	Mus_spretus
ENSMAUG00000020317	Sf3a1	94	94.809	ENSMPUG00000013144	SF3A1	92	94.809	Mustela_putorius_furo
ENSMAUG00000020317	Sf3a1	94	95.082	ENSMLUG00000002139	SF3A1	92	95.082	Myotis_lucifugus
ENSMAUG00000020317	Sf3a1	94	95.355	ENSNGAG00000016977	Sf3a1	92	95.355	Nannospalax_galili
ENSMAUG00000020317	Sf3a1	100	78.184	ENSNBRG00000016642	sf3a1	93	82.128	Neolamprologus_brichardi
ENSMAUG00000020317	Sf3a1	94	95.082	ENSNLEG00000003686	SF3A1	92	95.082	Nomascus_leucogenys
ENSMAUG00000020317	Sf3a1	90	83.452	ENSMEUG00000008741	SF3A1	92	83.452	Notamacropus_eugenii
ENSMAUG00000020317	Sf3a1	99	90.722	ENSOPRG00000016636	SF3A1	92	94.672	Ochotona_princeps
ENSMAUG00000020317	Sf3a1	94	95.082	ENSODEG00000002571	SF3A1	92	95.082	Octodon_degus
ENSMAUG00000020317	Sf3a1	100	78.228	ENSONIG00000010848	sf3a1	93	81.471	Oreochromis_niloticus
ENSMAUG00000020317	Sf3a1	94	95.082	ENSOCUG00000007633	SF3A1	92	95.082	Oryctolagus_cuniculus
ENSMAUG00000020317	Sf3a1	96	76.222	ENSORLG00000013050	sf3a1	92	80.742	Oryzias_latipes
ENSMAUG00000020317	Sf3a1	99	74.904	ENSORLG00020003236	sf3a1	91	78.976	Oryzias_latipes_hni
ENSMAUG00000020317	Sf3a1	100	76.582	ENSORLG00015017411	sf3a1	93	80.790	Oryzias_latipes_hsok
ENSMAUG00000020317	Sf3a1	100	76.962	ENSOMEG00000013362	sf3a1	93	80.381	Oryzias_melastigma
ENSMAUG00000020317	Sf3a1	94	94.809	ENSOGAG00000012931	SF3A1	92	94.809	Otolemur_garnettii
ENSMAUG00000020317	Sf3a1	94	92.760	ENSOARG00000006849	SF3A1	92	92.760	Ovis_aries
ENSMAUG00000020317	Sf3a1	94	93.852	ENSPPAG00000041790	SF3A1	92	93.852	Pan_paniscus
ENSMAUG00000020317	Sf3a1	94	94.945	ENSPPRG00000004391	SF3A1	92	94.945	Panthera_pardus
ENSMAUG00000020317	Sf3a1	94	94.809	ENSPTIG00000000844	SF3A1	95	94.809	Panthera_tigris_altaica
ENSMAUG00000020317	Sf3a1	94	94.945	ENSPTRG00000014240	SF3A1	92	94.945	Pan_troglodytes
ENSMAUG00000020317	Sf3a1	94	95.082	ENSPANG00000020772	SF3A1	92	95.082	Papio_anubis
ENSMAUG00000020317	Sf3a1	85	92.308	ENSPSIG00000012803	SF3A1	90	92.308	Pelodiscus_sinensis
ENSMAUG00000020317	Sf3a1	94	80.464	ENSPMGG00000023096	sf3a1	96	80.191	Periophthalmus_magnuspinnatus
ENSMAUG00000020317	Sf3a1	94	96.038	ENSPEMG00000009494	Sf3a1	92	96.038	Peromyscus_maniculatus_bairdii
ENSMAUG00000020317	Sf3a1	62	74.490	ENSPMAG00000007139	-	83	74.848	Petromyzon_marinus
ENSMAUG00000020317	Sf3a1	100	89.407	ENSPCIG00000022692	SF3A1	100	89.660	Phascolarctos_cinereus
ENSMAUG00000020317	Sf3a1	100	71.681	ENSPFOG00000016768	sf3a1	100	70.544	Poecilia_formosa
ENSMAUG00000020317	Sf3a1	100	77.904	ENSPLAG00000017268	sf3a1	93	80.790	Poecilia_latipinna
ENSMAUG00000020317	Sf3a1	85	81.325	ENSPMEG00000019811	sf3a1	98	80.271	Poecilia_mexicana
ENSMAUG00000020317	Sf3a1	100	78.030	ENSPREG00000010347	sf3a1	93	81.335	Poecilia_reticulata
ENSMAUG00000020317	Sf3a1	94	95.082	ENSPPYG00000011707	SF3A1	92	95.082	Pongo_abelii
ENSMAUG00000020317	Sf3a1	60	98.755	ENSPCAG00000003266	SF3A1	57	98.755	Procavia_capensis
ENSMAUG00000020317	Sf3a1	94	94.945	ENSPCOG00000026630	SF3A1	92	94.945	Propithecus_coquereli
ENSMAUG00000020317	Sf3a1	100	90.164	ENSPVAG00000017719	SF3A1	100	90.164	Pteropus_vampyrus
ENSMAUG00000020317	Sf3a1	100	78.580	ENSPNYG00000018706	sf3a1	93	82.128	Pundamilia_nyererei
ENSMAUG00000020317	Sf3a1	94	80.828	ENSPNAG00000003721	sf3a1	94	80.190	Pygocentrus_nattereri
ENSMAUG00000020317	Sf3a1	94	95.355	ENSRNOG00000005218	Sf3a1	92	95.355	Rattus_norvegicus
ENSMAUG00000020317	Sf3a1	94	94.945	ENSRBIG00000032167	SF3A1	92	94.945	Rhinopithecus_bieti
ENSMAUG00000020317	Sf3a1	94	94.945	ENSRROG00000044908	SF3A1	92	94.945	Rhinopithecus_roxellana
ENSMAUG00000020317	Sf3a1	97	93.617	ENSSBOG00000021960	SF3A1	100	94.535	Saimiri_boliviensis_boliviensis
ENSMAUG00000020317	Sf3a1	94	90.710	ENSSHAG00000003666	SF3A1	93	90.847	Sarcophilus_harrisii
ENSMAUG00000020317	Sf3a1	100	77.330	ENSSFOG00015004579	sf3a1	93	81.707	Scleropages_formosus
ENSMAUG00000020317	Sf3a1	100	75.443	ENSSMAG00000004275	sf3a1	93	79.155	Scophthalmus_maximus
ENSMAUG00000020317	Sf3a1	100	77.975	ENSSDUG00000022219	sf3a1	93	81.335	Seriola_dumerili
ENSMAUG00000020317	Sf3a1	100	77.975	ENSSLDG00000012642	sf3a1	93	81.335	Seriola_lalandi_dorsalis
ENSMAUG00000020317	Sf3a1	94	93.981	ENSSARG00000005960	SF3A1	95	93.981	Sorex_araneus
ENSMAUG00000020317	Sf3a1	94	88.291	ENSSPUG00000018863	SF3A1	97	86.172	Sphenodon_punctatus
ENSMAUG00000020317	Sf3a1	100	78.861	ENSSPAG00000011856	sf3a1	93	81.880	Stegastes_partitus
ENSMAUG00000020317	Sf3a1	94	95.082	ENSSSCG00000010002	SF3A1	92	95.082	Sus_scrofa
ENSMAUG00000020317	Sf3a1	94	89.932	ENSTGUG00000010547	SF3A1	95	90.068	Taeniopygia_guttata
ENSMAUG00000020317	Sf3a1	100	75.570	ENSTRUG00000006118	sf3a1	93	78.065	Takifugu_rubripes
ENSMAUG00000020317	Sf3a1	64	71.004	ENSTNIG00000005713	sf3a1	81	84.821	Tetraodon_nigroviridis
ENSMAUG00000020317	Sf3a1	94	87.875	ENSTBEG00000012771	SF3A1	92	87.875	Tupaia_belangeri
ENSMAUG00000020317	Sf3a1	94	93.997	ENSTTRG00000001535	SF3A1	92	94.134	Tursiops_truncatus
ENSMAUG00000020317	Sf3a1	99	89.975	ENSUAMG00000006750	SF3A1	91	94.077	Ursus_americanus
ENSMAUG00000020317	Sf3a1	94	94.945	ENSUMAG00000016665	SF3A1	98	94.255	Ursus_maritimus
ENSMAUG00000020317	Sf3a1	94	94.945	ENSVVUG00000003075	SF3A1	92	94.945	Vulpes_vulpes
ENSMAUG00000020317	Sf3a1	100	79.198	ENSXETG00000016144	sf3a1	92	83.106	Xenopus_tropicalis
ENSMAUG00000020317	Sf3a1	100	77.399	ENSXCOG00000015653	sf3a1	93	80.654	Xiphophorus_couchianus
ENSMAUG00000020317	Sf3a1	100	77.525	ENSXMAG00000002753	sf3a1	93	80.790	Xiphophorus_maculatus