EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000020552 (Gene tree)
Gene ID: 101838314
Gene Symbol: -
Alias: -
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 3457 bases
Position: chrKB708147.1:1216982-1220438
Accession: 101838314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000023407	RRM_1	PF00076.22	6.5e-14	1	1
ENSMAUP00000023405	RRM_1	PF00076.22	7.8e-14	1	1
ENSMAUP00000023400	RRM_1	PF00076.22	9.2e-14	1	1
ENSMAUP00000023396	RRM_1	PF00076.22	1e-13	1	1
ENSMAUP00000023407	FYTT	PF07078.11	0.00029	1	1
ENSMAUP00000023400	FYTT	PF07078.11	0.00033	1	1
ENSMAUP00000023396	FYTT	PF07078.11	0.00039	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000027416	-	588	-	ENSMAUP00000023407	195 (aa)	-	-
ENSMAUT00000027409	-	702	-	ENSMAUP00000023400	233 (aa)	-	-
ENSMAUT00000027414	-	639	XM_013113197	ENSMAUP00000023405	212 (aa)	-	-
ENSMAUT00000027405	-	729	-	ENSMAUP00000023396	242 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000020552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000020552's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000020552	-	100	72.932	ENSG00000183684	ALYREF	97	78.599	Homo_sapiens
ENSMAUG00000020552	-	100	62.132	ENSAPOG00000018455	ALYREF	100	65.827	Acanthochromis_polyacanthus
ENSMAUG00000020552	-	88	88.827	ENSAMEG00000017463	ALYREF	72	96.610	Ailuropoda_melanoleuca
ENSMAUG00000020552	-	90	83.422	ENSACAG00000010526	ALYREF	100	71.984	Anolis_carolinensis
ENSMAUG00000020552	-	86	94.012	ENSANAG00000022638	-	74	95.402	Aotus_nancymaae
ENSMAUG00000020552	-	100	76.498	ENSANAG00000028229	-	77	76.037	Aotus_nancymaae
ENSMAUG00000020552	-	100	74.708	ENSBTAG00000008498	ALYREF	100	79.767	Bos_taurus
ENSMAUG00000020552	-	100	75.486	ENSCJAG00000039942	ALYREF	97	78.599	Callithrix_jacchus
ENSMAUG00000020552	-	100	77.132	ENSCAFG00000005877	ALYREF	100	79.767	Canis_familiaris
ENSMAUG00000020552	-	100	77.132	ENSCAFG00020009815	ALYREF	100	79.767	Canis_lupus_dingo
ENSMAUG00000020552	-	99	84.475	ENSCHIG00000017396	ALYREF	92	86.301	Capra_hircus
ENSMAUG00000020552	-	88	95.349	ENSTSYG00000002272	ALYREF	72	97.590	Carlito_syrichta
ENSMAUG00000020552	-	57	97.744	ENSCAPG00000014727	-	100	97.744	Cavia_aperea
ENSMAUG00000020552	-	100	85.135	ENSCPOG00000013710	ALYREF	100	85.135	Cavia_porcellus
ENSMAUG00000020552	-	100	79.263	ENSCCAG00000030237	-	100	77.880	Cebus_capucinus
ENSMAUG00000020552	-	100	77.043	ENSCCAG00000020578	-	97	78.988	Cebus_capucinus
ENSMAUG00000020552	-	100	76.744	ENSCATG00000033169	ALYREF	97	78.988	Cercocebus_atys
ENSMAUG00000020552	-	100	89.352	ENSCLAG00000015026	ALYREF	100	89.352	Chinchilla_lanigera
ENSMAUG00000020552	-	100	76.744	ENSCSAG00000002216	ALYREF	97	78.988	Chlorocebus_sabaeus
ENSMAUG00000020552	-	87	95.294	ENSCANG00000034056	ALYREF	89	92.814	Colobus_angolensis_palliatus
ENSMAUG00000020552	-	100	86.036	ENSCGRG00001018191	-	100	86.036	Cricetulus_griseus_chok1gshd
ENSMAUG00000020552	-	87	90.000	ENSCGRG00000015871	-	90	91.111	Cricetulus_griseus_crigri
ENSMAUG00000020552	-	71	53.684	ENSCSEG00000015438	-	98	58.602	Cynoglossus_semilaevis
ENSMAUG00000020552	-	87	87.079	ENSDNOG00000002563	ALYREF	81	91.099	Dasypus_novemcinctus
ENSMAUG00000020552	-	90	89.674	ENSDORG00000025849	-	73	96.629	Dipodomys_ordii
ENSMAUG00000020552	-	87	94.886	ENSETEG00000016596	ALYREF	100	94.915	Echinops_telfairi
ENSMAUG00000020552	-	100	74.319	ENSEASG00005005824	ALYREF	95	79.377	Equus_asinus_asinus
ENSMAUG00000020552	-	100	74.319	ENSECAG00000018754	ALYREF	95	79.377	Equus_caballus
ENSMAUG00000020552	-	64	70.760	ENSEEUG00000010164	ALYREF	100	73.099	Erinaceus_europaeus
ENSMAUG00000020552	-	100	74.708	ENSFCAG00000022549	ALYREF	98	79.377	Felis_catus
ENSMAUG00000020552	-	89	96.532	ENSFDAG00000001213	ALYREF	83	96.532	Fukomys_damarensis
ENSMAUG00000020552	-	100	78.824	ENSGALG00000007237	ALYREF	100	76.628	Gallus_gallus
ENSMAUG00000020552	-	100	66.409	ENSGACG00000013328	ALYREF	100	66.415	Gasterosteus_aculeatus
ENSMAUG00000020552	-	100	74.419	ENSGAGG00000008536	ALYREF	100	76.426	Gopherus_agassizii
ENSMAUG00000020552	-	100	73.308	ENSGGOG00000013935	ALYREF	99	78.295	Gorilla_gorilla
ENSMAUG00000020552	-	100	86.364	ENSHGLG00000008293	ALYREF	100	86.818	Heterocephalus_glaber_female
ENSMAUG00000020552	-	87	88.827	ENSHGLG00100006949	ALYREF	84	88.832	Heterocephalus_glaber_male
ENSMAUG00000020552	-	100	62.547	ENSHCOG00000015046	ALYREF	100	65.428	Hippocampus_comes
ENSMAUG00000020552	-	100	78.764	ENSJJAG00000004134	-	100	78.906	Jaculus_jaculus
ENSMAUG00000020552	-	100	66.667	ENSLACG00000005694	ALYREF	100	69.767	Latimeria_chalumnae
ENSMAUG00000020552	-	87	93.820	ENSLAFG00000003083	ALYREF	100	93.122	Loxodonta_africana
ENSMAUG00000020552	-	100	77.381	ENSMFAG00000001394	ALYREF	97	79.600	Macaca_fascicularis
ENSMAUG00000020552	-	100	76.744	ENSMMUG00000012884	ALYREF	97	78.988	Macaca_mulatta
ENSMAUG00000020552	-	100	76.744	ENSMNEG00000043666	ALYREF	97	78.988	Macaca_nemestrina
ENSMAUG00000020552	-	89	94.798	ENSMLEG00000043353	ALYREF	82	92.899	Mandrillus_leucophaeus
ENSMAUG00000020552	-	100	75.094	ENSMICG00000017403	ALYREF	97	80.078	Microcebus_murinus
ENSMAUG00000020552	-	100	91.549	ENSMOCG00000016792	-	100	91.549	Microtus_ochrogaster
ENSMAUG00000020552	-	99	74.903	ENSMODG00000003030	ALYREF	84	78.599	Monodelphis_domestica
ENSMAUG00000020552	-	100	64.074	ENSMALG00000019408	ALYREF	100	65.818	Monopterus_albus
ENSMAUG00000020552	-	100	80.392	MGP_CAROLIEiJ_G0017529	Alyref	100	79.923	Mus_caroli
ENSMAUG00000020552	-	100	79.372	MGP_CAROLIEiJ_G0014874	Alyref2	100	79.372	Mus_caroli
ENSMAUG00000020552	-	100	65.182	ENSMUSG00000086727	4931428L18Rik	100	63.821	Mus_musculus
ENSMAUG00000020552	-	90	67.431	ENSMUSG00000112931	Gm4303	62	67.222	Mus_musculus
ENSMAUG00000020552	-	100	62.362	ENSMUSG00000097878	Gm8764	98	63.636	Mus_musculus
ENSMAUG00000020552	-	100	61.455	ENSMUSG00000090854	Gm4340	100	53.676	Mus_musculus
ENSMAUG00000020552	-	100	62.362	ENSMUSG00000091779	Gm21293	100	54.478	Mus_musculus
ENSMAUG00000020552	-	91	66.667	ENSMUSG00000094314	Gm4301	62	66.111	Mus_musculus
ENSMAUG00000020552	-	90	67.431	ENSMUSG00000112856	Gm4305	62	67.222	Mus_musculus
ENSMAUG00000020552	-	100	62.362	ENSMUSG00000094144	Gm21312	100	54.478	Mus_musculus
ENSMAUG00000020552	-	100	81.651	ENSMUSG00000060244	Alyref2	100	81.651	Mus_musculus
ENSMAUG00000020552	-	100	62.362	ENSMUSG00000095022	Gm20765	100	54.478	Mus_musculus
ENSMAUG00000020552	-	91	66.667	ENSMUSG00000096640	Gm4312	62	66.111	Mus_musculus
ENSMAUG00000020552	-	100	80.392	ENSMUSG00000025134	Alyref	100	79.923	Mus_musculus
ENSMAUG00000020552	-	91	67.580	ENSMUSG00000091101	Gm4302	61	67.222	Mus_musculus
ENSMAUG00000020552	-	90	67.431	ENSMUSG00000096744	Gm4307	62	67.222	Mus_musculus
ENSMAUG00000020552	-	100	62.362	ENSMUSG00000097427	Gm6763	98	63.636	Mus_musculus
ENSMAUG00000020552	-	100	63.600	ENSMUSG00000117091	AC153137.1	100	62.249	Mus_musculus
ENSMAUG00000020552	-	100	62.362	ENSMUSG00000097550	Gm21304	100	54.478	Mus_musculus
ENSMAUG00000020552	-	100	80.392	MGP_PahariEiJ_G0018655	-	100	79.923	Mus_pahari
ENSMAUG00000020552	-	83	70.370	MGP_PahariEiJ_G0027254	-	82	70.000	Mus_pahari
ENSMAUG00000020552	-	83	70.370	MGP_PahariEiJ_G0027255	-	80	70.000	Mus_pahari
ENSMAUG00000020552	-	72	73.936	MGP_PahariEiJ_G0018656	-	99	73.438	Mus_pahari
ENSMAUG00000020552	-	100	81.193	MGP_SPRETEiJ_G0015679	Alyref2	100	81.193	Mus_spretus
ENSMAUG00000020552	-	100	80.392	MGP_SPRETEiJ_G0018373	Alyref	100	79.923	Mus_spretus
ENSMAUG00000020552	-	87	57.965	MGP_SPRETEiJ_G0016590	-	55	77.419	Mus_spretus
ENSMAUG00000020552	-	98	58.333	ENSMLUG00000002626	-	98	58.661	Myotis_lucifugus
ENSMAUG00000020552	-	97	62.979	ENSMLUG00000026271	-	79	60.515	Myotis_lucifugus
ENSMAUG00000020552	-	98	54.622	ENSMLUG00000024471	-	82	55.000	Myotis_lucifugus
ENSMAUG00000020552	-	89	64.130	ENSMLUG00000028343	-	83	66.667	Myotis_lucifugus
ENSMAUG00000020552	-	98	62.553	ENSMLUG00000024976	-	79	59.829	Myotis_lucifugus
ENSMAUG00000020552	-	98	64.407	ENSMLUG00000025677	-	77	63.559	Myotis_lucifugus
ENSMAUG00000020552	-	89	88.398	ENSMLUG00000009555	-	70	89.305	Myotis_lucifugus
ENSMAUG00000020552	-	98	56.410	ENSMLUG00000022869	-	81	57.203	Myotis_lucifugus
ENSMAUG00000020552	-	98	65.546	ENSMLUG00000027516	-	78	66.094	Myotis_lucifugus
ENSMAUG00000020552	-	98	54.661	ENSMLUG00000015043	-	98	55.319	Myotis_lucifugus
ENSMAUG00000020552	-	98	63.136	ENSMLUG00000030407	-	77	61.441	Myotis_lucifugus
ENSMAUG00000020552	-	100	48.889	ENSMLUG00000023213	-	100	50.190	Myotis_lucifugus
ENSMAUG00000020552	-	98	63.636	ENSMLUG00000027352	-	77	62.009	Myotis_lucifugus
ENSMAUG00000020552	-	98	60.699	ENSMLUG00000024447	-	76	60.088	Myotis_lucifugus
ENSMAUG00000020552	-	100	73.308	ENSNLEG00000010313	ALYREF	97	78.988	Nomascus_leucogenys
ENSMAUG00000020552	-	64	83.582	ENSMEUG00000002210	ALYREF	59	94.030	Notamacropus_eugenii
ENSMAUG00000020552	-	57	94.737	ENSOPRG00000005551	-	52	94.737	Ochotona_princeps
ENSMAUG00000020552	-	100	74.231	ENSODEG00000008359	ALYREF	100	79.231	Octodon_degus
ENSMAUG00000020552	-	100	63.529	ENSORLG00000012331	ALYREF	100	67.537	Oryzias_latipes
ENSMAUG00000020552	-	87	89.888	ENSOGAG00000012409	ALYREF	85	85.427	Otolemur_garnettii
ENSMAUG00000020552	-	87	89.888	ENSOARG00000017932	ALYREF	67	97.765	Ovis_aries
ENSMAUG00000020552	-	100	74.708	ENSPPRG00000010829	ALYREF	98	79.377	Panthera_pardus
ENSMAUG00000020552	-	64	98.400	ENSPTIG00000006399	ALYREF	81	97.241	Panthera_tigris_altaica
ENSMAUG00000020552	-	100	73.308	ENSPTRG00000009774	ALYREF	97	78.988	Pan_troglodytes
ENSMAUG00000020552	-	100	76.744	ENSPANG00000019265	ALYREF	97	78.988	Papio_anubis
ENSMAUG00000020552	-	63	81.955	ENSPSIG00000017541	ALYREF	98	90.226	Pelodiscus_sinensis
ENSMAUG00000020552	-	100	73.308	ENSPPYG00000008749	ALYREF	97	78.988	Pongo_abelii
ENSMAUG00000020552	-	100	75.094	ENSPCOG00000020874	ALYREF	97	80.078	Propithecus_coquereli
ENSMAUG00000020552	-	100	76.863	ENSPVAG00000017866	ALYREF	100	76.863	Pteropus_vampyrus
ENSMAUG00000020552	-	66	69.942	ENSRNOG00000036687	Alyref	91	69.886	Rattus_norvegicus
ENSMAUG00000020552	-	87	87.151	ENSRBIG00000039651	ALYREF	87	84.977	Rhinopithecus_bieti
ENSMAUG00000020552	-	87	87.778	ENSRROG00000045364	ALYREF	88	85.047	Rhinopithecus_roxellana
ENSMAUG00000020552	-	87	88.268	ENSSHAG00000010459	ALYREF	95	95.082	Sarcophilus_harrisii
ENSMAUG00000020552	-	100	52.075	ENSSDUG00000003992	-	100	52.632	Seriola_dumerili
ENSMAUG00000020552	-	100	52.672	ENSSLDG00000005386	-	100	53.612	Seriola_lalandi_dorsalis
ENSMAUG00000020552	-	100	74.806	ENSSPUG00000004600	ALYREF	100	75.969	Sphenodon_punctatus
ENSMAUG00000020552	-	100	61.905	ENSSPAG00000011178	ALYREF	97	63.799	Stegastes_partitus
ENSMAUG00000020552	-	100	77.395	ENSSSCG00000032655	ALYREF	100	80.078	Sus_scrofa
ENSMAUG00000020552	-	58	89.630	ENSTGUG00000003513	ALYREF	100	89.630	Taeniopygia_guttata
ENSMAUG00000020552	-	100	65.038	ENSTRUG00000008828	ALYREF	100	62.271	Takifugu_rubripes
ENSMAUG00000020552	-	87	88.202	ENSTBEG00000005834	ALYREF	100	96.067	Tupaia_belangeri
ENSMAUG00000020552	-	100	76.953	ENSTTRG00000012275	ALYREF	100	78.906	Tursiops_truncatus
ENSMAUG00000020552	-	86	77.143	ENSUAMG00000016931	ALYREF	65	85.057	Ursus_americanus
ENSMAUG00000020552	-	86	77.143	ENSUMAG00000016384	ALYREF	66	83.708	Ursus_maritimus
ENSMAUG00000020552	-	100	75.720	ENSXETG00000005391	alyref	100	77.778	Xenopus_tropicalis