EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000020609 (Gene tree)
Gene ID: 101833427
Gene Symbol: Cmss1
Alias: 1110001A06Rik|2610528E23Rik|4930572F24Rik
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 355360 bases
Position: chrKB708192.1:5230292-5585651
Accession: 101833427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000023467	CMS1	PF14617.6	1.7e-22	1	1
ENSMAUP00000023467	DEAD	PF00270.29	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000027477	-	672	XM_013118177	ENSMAUP00000023467	223 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000020609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000020609's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000020609	Cmss1	100	60.573	ENSG00000184220	CMSS1	100	72.000	Homo_sapiens
ENSMAUG00000020609	Cmss1	66	44.554	ENSAPOG00000010604	cmss1	82	44.554	Acanthochromis_polyacanthus
ENSMAUG00000020609	Cmss1	90	57.977	ENSAMEG00000004092	CMSS1	99	57.977	Ailuropoda_melanoleuca
ENSMAUG00000020609	Cmss1	66	46.739	ENSACIG00000021854	cmss1	75	46.739	Amphilophus_citrinellus
ENSMAUG00000020609	Cmss1	100	37.370	ENSAOCG00000013361	cmss1	100	39.527	Amphiprion_ocellaris
ENSMAUG00000020609	Cmss1	100	37.931	ENSAPEG00000005829	cmss1	100	38.644	Amphiprion_percula
ENSMAUG00000020609	Cmss1	100	34.812	ENSATEG00000008209	cmss1	100	37.329	Anabas_testudineus
ENSMAUG00000020609	Cmss1	78	46.957	ENSAPLG00000010542	CMSS1	100	46.087	Anas_platyrhynchos
ENSMAUG00000020609	Cmss1	89	46.124	ENSACAG00000011065	CMSS1	95	46.899	Anolis_carolinensis
ENSMAUG00000020609	Cmss1	100	58.571	ENSANAG00000023565	CMSS1	100	58.214	Aotus_nancymaae
ENSMAUG00000020609	Cmss1	100	36.770	ENSACLG00000027294	cmss1	100	37.113	Astatotilapia_calliptera
ENSMAUG00000020609	Cmss1	100	60.573	ENSBTAG00000013663	CMSS1	100	60.573	Bos_taurus
ENSMAUG00000020609	Cmss1	100	58.929	ENSCJAG00000000610	CMSS1	100	58.929	Callithrix_jacchus
ENSMAUG00000020609	Cmss1	95	58.303	ENSCAFG00000009230	CMSS1	97	58.303	Canis_familiaris
ENSMAUG00000020609	Cmss1	79	54.741	ENSCAFG00020024156	-	72	54.741	Canis_lupus_dingo
ENSMAUG00000020609	Cmss1	91	59.770	ENSCAFG00020009464	-	95	59.770	Canis_lupus_dingo
ENSMAUG00000020609	Cmss1	95	57.565	ENSCHIG00000013003	CMSS1	98	56.667	Capra_hircus
ENSMAUG00000020609	Cmss1	95	56.667	ENSTSYG00000009266	CMSS1	97	59.055	Carlito_syrichta
ENSMAUG00000020609	Cmss1	75	45.872	ENSCAPG00000013584	CMSS1	50	66.667	Cavia_aperea
ENSMAUG00000020609	Cmss1	100	59.286	ENSCPOG00000014680	CMSS1	100	58.423	Cavia_porcellus
ENSMAUG00000020609	Cmss1	100	59.286	ENSCCAG00000034685	CMSS1	100	59.286	Cebus_capucinus
ENSMAUG00000020609	Cmss1	100	60.215	ENSCATG00000031980	CMSS1	100	60.215	Cercocebus_atys
ENSMAUG00000020609	Cmss1	78	56.332	ENSCLAG00000011241	CMSS1	98	56.332	Chinchilla_lanigera
ENSMAUG00000020609	Cmss1	85	58.776	ENSCSAG00000006024	CMSS1	100	58.776	Chlorocebus_sabaeus
ENSMAUG00000020609	Cmss1	100	48.201	ENSCHOG00000012098	CMSS1	100	48.201	Choloepus_hoffmanni
ENSMAUG00000020609	Cmss1	100	60.215	ENSCANG00000031337	CMSS1	100	60.215	Colobus_angolensis_palliatus
ENSMAUG00000020609	Cmss1	100	74.820	ENSCGRG00001014305	Cmss1	100	74.820	Cricetulus_griseus_chok1gshd
ENSMAUG00000020609	Cmss1	91	70.428	ENSCGRG00000006722	Cmss1	100	70.428	Cricetulus_griseus_crigri
ENSMAUG00000020609	Cmss1	100	36.120	ENSCSEG00000004958	cmss1	100	36.304	Cynoglossus_semilaevis
ENSMAUG00000020609	Cmss1	100	36.949	ENSCVAG00000005039	cmss1	100	37.755	Cyprinodon_variegatus
ENSMAUG00000020609	Cmss1	100	32.770	ENSDARG00000112579	cmss1	100	32.776	Danio_rerio
ENSMAUG00000020609	Cmss1	92	53.846	ENSDNOG00000040418	CMSS1	91	55.814	Dasypus_novemcinctus
ENSMAUG00000020609	Cmss1	100	61.071	ENSDORG00000010461	Cmss1	100	61.071	Dipodomys_ordii
ENSMAUG00000020609	Cmss1	96	51.673	ENSEASG00005010966	CMSS1	99	55.251	Equus_asinus_asinus
ENSMAUG00000020609	Cmss1	93	57.795	ENSECAG00000015662	CMSS1	100	55.947	Equus_caballus
ENSMAUG00000020609	Cmss1	95	81.395	ENSEEUG00000007624	-	73	81.395	Erinaceus_europaeus
ENSMAUG00000020609	Cmss1	100	37.333	ENSELUG00000019459	cmss1	100	38.667	Esox_lucius
ENSMAUG00000020609	Cmss1	100	61.484	ENSFCAG00000044577	CMSS1	100	62.857	Felis_catus
ENSMAUG00000020609	Cmss1	82	43.038	ENSFALG00000005816	CMSS1	100	44.726	Ficedula_albicollis
ENSMAUG00000020609	Cmss1	78	58.079	ENSFDAG00000012577	CMSS1	100	58.079	Fukomys_damarensis
ENSMAUG00000020609	Cmss1	77	43.043	ENSFHEG00000012008	cmss1	95	43.043	Fundulus_heteroclitus
ENSMAUG00000020609	Cmss1	99	36.525	ENSGMOG00000016729	cmss1	100	37.234	Gadus_morhua
ENSMAUG00000020609	Cmss1	80	47.436	ENSGALG00000015267	CMSS1	90	47.436	Gallus_gallus
ENSMAUG00000020609	Cmss1	68	41.748	ENSGAFG00000021217	cmss1	77	41.089	Gambusia_affinis
ENSMAUG00000020609	Cmss1	99	33.569	ENSGACG00000002798	cmss1	100	34.737	Gasterosteus_aculeatus
ENSMAUG00000020609	Cmss1	84	49.383	ENSGAGG00000019861	CMSS1	94	49.383	Gopherus_agassizii
ENSMAUG00000020609	Cmss1	90	58.594	ENSGGOG00000014125	CMSS1	98	58.594	Gorilla_gorilla
ENSMAUG00000020609	Cmss1	100	35.517	ENSHBUG00000008431	cmss1	100	37.931	Haplochromis_burtoni
ENSMAUG00000020609	Cmss1	87	56.574	ENSHGLG00000019481	CMSS1	99	56.574	Heterocephalus_glaber_female
ENSMAUG00000020609	Cmss1	90	56.420	ENSHGLG00100010314	CMSS1	99	56.420	Heterocephalus_glaber_male
ENSMAUG00000020609	Cmss1	100	36.964	ENSHCOG00000003222	cmss1	100	35.254	Hippocampus_comes
ENSMAUG00000020609	Cmss1	100	34.237	ENSIPUG00000011591	cmss1	100	33.887	Ictalurus_punctatus
ENSMAUG00000020609	Cmss1	100	59.498	ENSSTOG00000019366	CMSS1	100	59.498	Ictidomys_tridecemlineatus
ENSMAUG00000020609	Cmss1	100	60.573	ENSJJAG00000014894	Cmss1	100	60.573	Jaculus_jaculus
ENSMAUG00000020609	Cmss1	74	40.000	ENSKMAG00000002390	cmss1	81	44.444	Kryptolebias_marmoratus
ENSMAUG00000020609	Cmss1	66	45.729	ENSLBEG00000006298	cmss1	83	45.729	Labrus_bergylta
ENSMAUG00000020609	Cmss1	78	43.162	ENSLACG00000009293	CMSS1	100	43.162	Latimeria_chalumnae
ENSMAUG00000020609	Cmss1	100	36.789	ENSLOCG00000009391	cmss1	100	37.024	Lepisosteus_oculatus
ENSMAUG00000020609	Cmss1	78	57.018	ENSLAFG00000017509	CMSS1	100	57.018	Loxodonta_africana
ENSMAUG00000020609	Cmss1	100	60.573	ENSMFAG00000045006	CMSS1	100	60.573	Macaca_fascicularis
ENSMAUG00000020609	Cmss1	100	61.071	ENSMMUG00000002939	CMSS1	100	61.071	Macaca_mulatta
ENSMAUG00000020609	Cmss1	100	60.215	ENSMNEG00000031315	CMSS1	100	60.215	Macaca_nemestrina
ENSMAUG00000020609	Cmss1	100	60.215	ENSMLEG00000033660	CMSS1	100	60.215	Mandrillus_leucophaeus
ENSMAUG00000020609	Cmss1	100	39.865	ENSMAMG00000017176	cmss1	100	40.203	Mastacembelus_armatus
ENSMAUG00000020609	Cmss1	100	36.770	ENSMZEG00005021886	cmss1	100	37.113	Maylandia_zebra
ENSMAUG00000020609	Cmss1	78	46.930	ENSMGAG00000014360	CMSS1	100	46.930	Meleagris_gallopavo
ENSMAUG00000020609	Cmss1	100	59.857	ENSMICG00000048977	CMSS1	100	59.857	Microcebus_murinus
ENSMAUG00000020609	Cmss1	100	67.986	ENSMOCG00000021937	Cmss1	100	67.986	Microtus_ochrogaster
ENSMAUG00000020609	Cmss1	66	42.079	ENSMMOG00000019794	cmss1	84	42.079	Mola_mola
ENSMAUG00000020609	Cmss1	91	51.724	ENSMODG00000002275	CMSS1	98	51.527	Monodelphis_domestica
ENSMAUG00000020609	Cmss1	100	37.671	ENSMALG00000004250	cmss1	100	38.356	Monopterus_albus
ENSMAUG00000020609	Cmss1	100	67.384	MGP_CAROLIEiJ_G0020824	Cmss1	100	67.384	Mus_caroli
ENSMAUG00000020609	Cmss1	100	68.459	ENSMUSG00000022748	Cmss1	100	68.459	Mus_musculus
ENSMAUG00000020609	Cmss1	100	66.667	MGP_PahariEiJ_G0016524	Cmss1	100	66.667	Mus_pahari
ENSMAUG00000020609	Cmss1	100	67.742	MGP_SPRETEiJ_G0021724	Cmss1	100	67.742	Mus_spretus
ENSMAUG00000020609	Cmss1	85	63.115	ENSMPUG00000011324	CMSS1	98	60.700	Mustela_putorius_furo
ENSMAUG00000020609	Cmss1	90	60.618	ENSMLUG00000001131	CMSS1	98	60.618	Myotis_lucifugus
ENSMAUG00000020609	Cmss1	100	60.932	ENSNGAG00000020316	Cmss1	100	60.932	Nannospalax_galili
ENSMAUG00000020609	Cmss1	100	36.426	ENSNBRG00000003095	cmss1	100	37.113	Neolamprologus_brichardi
ENSMAUG00000020609	Cmss1	100	60.573	ENSNLEG00000034172	CMSS1	100	60.573	Nomascus_leucogenys
ENSMAUG00000020609	Cmss1	78	40.351	ENSMEUG00000014505	CMSS1	100	40.351	Notamacropus_eugenii
ENSMAUG00000020609	Cmss1	100	61.511	ENSOPRG00000002986	CMSS1	100	61.511	Ochotona_princeps
ENSMAUG00000020609	Cmss1	100	55.477	ENSODEG00000003558	-	100	55.477	Octodon_degus
ENSMAUG00000020609	Cmss1	100	59.498	ENSODEG00000005226	-	100	59.498	Octodon_degus
ENSMAUG00000020609	Cmss1	100	57.836	ENSODEG00000001853	-	100	57.836	Octodon_degus
ENSMAUG00000020609	Cmss1	100	50.183	ENSODEG00000009446	-	100	50.183	Octodon_degus
ENSMAUG00000020609	Cmss1	66	40.099	ENSONIG00000006678	cmss1	77	40.099	Oreochromis_niloticus
ENSMAUG00000020609	Cmss1	90	50.385	ENSOANG00000007529	CMSS1	100	51.055	Ornithorhynchus_anatinus
ENSMAUG00000020609	Cmss1	95	59.779	ENSOCUG00000025366	CMSS1	98	59.779	Oryctolagus_cuniculus
ENSMAUG00000020609	Cmss1	100	39.236	ENSORLG00000020340	cmss1	100	40.625	Oryzias_latipes
ENSMAUG00000020609	Cmss1	78	40.000	ENSORLG00020012235	cmss1	99	39.910	Oryzias_latipes_hni
ENSMAUG00000020609	Cmss1	66	40.404	ENSORLG00015015551	cmss1	75	40.404	Oryzias_latipes_hsok
ENSMAUG00000020609	Cmss1	100	39.384	ENSOMEG00000012555	cmss1	100	39.726	Oryzias_melastigma
ENSMAUG00000020609	Cmss1	78	57.456	ENSOGAG00000002045	CMSS1	100	57.456	Otolemur_garnettii
ENSMAUG00000020609	Cmss1	90	59.144	ENSOARG00000017899	CMSS1	88	59.144	Ovis_aries
ENSMAUG00000020609	Cmss1	90	58.594	ENSPPAG00000038515	CMSS1	97	56.089	Pan_paniscus
ENSMAUG00000020609	Cmss1	100	61.131	ENSPPRG00000016767	CMSS1	100	61.649	Panthera_pardus
ENSMAUG00000020609	Cmss1	100	60.777	ENSPTIG00000018274	CMSS1	100	62.143	Panthera_tigris_altaica
ENSMAUG00000020609	Cmss1	100	59.498	ENSPTRG00000015157	CMSS1	100	59.498	Pan_troglodytes
ENSMAUG00000020609	Cmss1	90	55.859	ENSPANG00000019980	CMSS1	98	55.859	Papio_anubis
ENSMAUG00000020609	Cmss1	89	37.643	ENSPKIG00000012609	cmss1	97	39.773	Paramormyrops_kingsleyae
ENSMAUG00000020609	Cmss1	78	49.785	ENSPSIG00000003849	CMSS1	100	49.785	Pelodiscus_sinensis
ENSMAUG00000020609	Cmss1	81	39.831	ENSPMGG00000010286	cmss1	100	40.254	Periophthalmus_magnuspinnatus
ENSMAUG00000020609	Cmss1	100	70.357	ENSPEMG00000016384	Cmss1	100	70.357	Peromyscus_maniculatus_bairdii
ENSMAUG00000020609	Cmss1	67	39.216	ENSPMAG00000001146	cmss1	99	39.604	Petromyzon_marinus
ENSMAUG00000020609	Cmss1	87	53.629	ENSPCIG00000015656	CMSS1	94	51.613	Phascolarctos_cinereus
ENSMAUG00000020609	Cmss1	100	38.542	ENSPFOG00000016849	cmss1	100	37.979	Poecilia_formosa
ENSMAUG00000020609	Cmss1	100	38.194	ENSPLAG00000008323	cmss1	100	37.631	Poecilia_latipinna
ENSMAUG00000020609	Cmss1	100	36.082	ENSPMEG00000021020	cmss1	100	37.370	Poecilia_mexicana
ENSMAUG00000020609	Cmss1	85	39.600	ENSPREG00000007618	cmss1	84	38.956	Poecilia_reticulata
ENSMAUG00000020609	Cmss1	100	60.573	ENSPPYG00000013606	CMSS1	100	60.573	Pongo_abelii
ENSMAUG00000020609	Cmss1	100	60.573	ENSPCOG00000020035	CMSS1	100	60.573	Propithecus_coquereli
ENSMAUG00000020609	Cmss1	100	54.839	ENSPVAG00000017031	CMSS1	100	54.839	Pteropus_vampyrus
ENSMAUG00000020609	Cmss1	88	36.226	ENSPNYG00000013428	cmss1	97	36.604	Pundamilia_nyererei
ENSMAUG00000020609	Cmss1	100	34.551	ENSPNAG00000007912	cmss1	100	34.884	Pygocentrus_nattereri
ENSMAUG00000020609	Cmss1	90	66.148	ENSRNOG00000027888	Cmss1	99	66.148	Rattus_norvegicus
ENSMAUG00000020609	Cmss1	100	60.357	ENSRBIG00000037931	CMSS1	100	59.498	Rhinopithecus_bieti
ENSMAUG00000020609	Cmss1	100	60.357	ENSRROG00000042910	CMSS1	98	67.797	Rhinopithecus_roxellana
ENSMAUG00000020609	Cmss1	90	58.366	ENSSBOG00000030980	CMSS1	98	58.366	Saimiri_boliviensis_boliviensis
ENSMAUG00000020609	Cmss1	87	50.781	ENSSHAG00000009321	CMSS1	99	51.587	Sarcophilus_harrisii
ENSMAUG00000020609	Cmss1	100	38.225	ENSSFOG00015001509	cmss1	100	39.041	Scleropages_formosus
ENSMAUG00000020609	Cmss1	100	37.457	ENSSMAG00000001653	cmss1	100	37.584	Scophthalmus_maximus
ENSMAUG00000020609	Cmss1	100	38.621	ENSSDUG00000007719	cmss1	100	38.966	Seriola_dumerili
ENSMAUG00000020609	Cmss1	68	43.204	ENSSLDG00000012300	cmss1	76	38.462	Seriola_lalandi_dorsalis
ENSMAUG00000020609	Cmss1	100	50.538	ENSSARG00000003584	CMSS1	100	48.029	Sorex_araneus
ENSMAUG00000020609	Cmss1	77	65.741	ENSSPUG00000003865	CMSS1	100	45.133	Sphenodon_punctatus
ENSMAUG00000020609	Cmss1	68	45.146	ENSSPAG00000019182	cmss1	82	37.736	Stegastes_partitus
ENSMAUG00000020609	Cmss1	100	62.366	ENSSSCG00000011970	CMSS1	100	62.366	Sus_scrofa
ENSMAUG00000020609	Cmss1	78	43.668	ENSTGUG00000013635	CMSS1	100	44.541	Taeniopygia_guttata
ENSMAUG00000020609	Cmss1	100	35.354	ENSTRUG00000015265	cmss1	100	35.690	Takifugu_rubripes
ENSMAUG00000020609	Cmss1	100	85.849	ENSTBEG00000016722	CMSS1	80	85.849	Tupaia_belangeri
ENSMAUG00000020609	Cmss1	100	60.650	ENSTTRG00000001562	CMSS1	100	60.650	Tursiops_truncatus
ENSMAUG00000020609	Cmss1	96	56.727	ENSUAMG00000024209	CMSS1	100	57.778	Ursus_americanus
ENSMAUG00000020609	Cmss1	95	56.458	ENSUMAG00000001983	CMSS1	99	58.140	Ursus_maritimus
ENSMAUG00000020609	Cmss1	86	84.615	ENSVPAG00000000263	CMSS1	66	84.615	Vicugna_pacos
ENSMAUG00000020609	Cmss1	73	56.621	ENSVVUG00000007776	-	85	56.621	Vulpes_vulpes
ENSMAUG00000020609	Cmss1	86	59.274	ENSVVUG00000021647	-	100	59.274	Vulpes_vulpes
ENSMAUG00000020609	Cmss1	100	37.676	ENSXETG00000011858	cmss1	100	37.324	Xenopus_tropicalis
ENSMAUG00000020609	Cmss1	68	41.262	ENSXCOG00000018724	cmss1	69	40.594	Xiphophorus_couchianus
ENSMAUG00000020609	Cmss1	68	41.262	ENSXMAG00000011243	cmss1	76	40.594	Xiphophorus_maculatus