EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000020864 (Gene tree)
Gene ID: 101830597
Gene Symbol: Rc3h1
Alias: 5730557L09Rik|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 45215 bases
Position: chrKB708154.1:9839681-9884895
Accession: 101830597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000023844	zf-CCCH	PF00642.24	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000027857	-	3180	XM_005071463	ENSMAUP00000023844	1059 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000020864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000020864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000020864	Rc3h1	78	56.636	ENSMAUG00000003117	Rc3h2	79	56.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000020864	Rc3h1	100	93.750	ENSG00000135870	RC3H1	97	94.254	Homo_sapiens
ENSMAUG00000020864	Rc3h1	100	94.254	ENSAMEG00000015657	RC3H1	97	94.254	Ailuropoda_melanoleuca
ENSMAUG00000020864	Rc3h1	94	86.481	ENSAPLG00000005341	RC3H1	88	85.871	Anas_platyrhynchos
ENSMAUG00000020864	Rc3h1	100	84.975	ENSACAG00000015271	RC3H1	98	84.845	Anolis_carolinensis
ENSMAUG00000020864	Rc3h1	100	93.750	ENSANAG00000036716	RC3H1	97	94.254	Aotus_nancymaae
ENSMAUG00000020864	Rc3h1	100	85.409	ENSBTAG00000052708	RC3H1	100	85.854	Bos_taurus
ENSMAUG00000020864	Rc3h1	100	93.750	ENSCJAG00000009106	RC3H1	97	94.254	Callithrix_jacchus
ENSMAUG00000020864	Rc3h1	93	94.052	ENSCAFG00000014434	RC3H1	97	94.556	Canis_familiaris
ENSMAUG00000020864	Rc3h1	93	94.052	ENSCAFG00020017112	RC3H1	99	97.978	Canis_lupus_dingo
ENSMAUG00000020864	Rc3h1	100	93.548	ENSCHIG00000002873	RC3H1	97	94.052	Capra_hircus
ENSMAUG00000020864	Rc3h1	99	85.071	ENSTSYG00000003913	RC3H1	97	93.857	Carlito_syrichta
ENSMAUG00000020864	Rc3h1	100	90.927	ENSCPOG00000004349	RC3H1	97	90.927	Cavia_porcellus
ENSMAUG00000020864	Rc3h1	93	93.548	ENSCCAG00000025652	RC3H1	93	94.052	Cebus_capucinus
ENSMAUG00000020864	Rc3h1	100	94.052	ENSCATG00000033497	RC3H1	97	94.556	Cercocebus_atys
ENSMAUG00000020864	Rc3h1	100	93.253	ENSCLAG00000011267	RC3H1	97	93.656	Chinchilla_lanigera
ENSMAUG00000020864	Rc3h1	93	93.952	ENSCSAG00000011823	RC3H1	77	94.456	Chlorocebus_sabaeus
ENSMAUG00000020864	Rc3h1	100	85.028	ENSCPBG00000014670	RC3H1	100	85.213	Chrysemys_picta_bellii
ENSMAUG00000020864	Rc3h1	100	93.952	ENSCANG00000032120	RC3H1	97	94.456	Colobus_angolensis_palliatus
ENSMAUG00000020864	Rc3h1	93	98.888	ENSCGRG00001020812	Rc3h1	88	98.888	Cricetulus_griseus_chok1gshd
ENSMAUG00000020864	Rc3h1	93	98.888	ENSCGRG00000011952	Rc3h1	88	98.888	Cricetulus_griseus_crigri
ENSMAUG00000020864	Rc3h1	58	90.982	ENSDNOG00000011494	RC3H1	99	91.787	Dasypus_novemcinctus
ENSMAUG00000020864	Rc3h1	93	93.649	ENSDORG00000004855	Rc3h1	88	93.649	Dipodomys_ordii
ENSMAUG00000020864	Rc3h1	83	94.478	ENSETEG00000012064	RC3H1	84	94.478	Echinops_telfairi
ENSMAUG00000020864	Rc3h1	100	85.129	ENSEASG00005017000	RC3H1	100	85.574	Equus_asinus_asinus
ENSMAUG00000020864	Rc3h1	100	89.953	ENSECAG00000021208	RC3H1	100	90.326	Equus_caballus
ENSMAUG00000020864	Rc3h1	86	82.375	ENSEEUG00000014861	RC3H1	85	82.375	Erinaceus_europaeus
ENSMAUG00000020864	Rc3h1	100	94.153	ENSFCAG00000014924	RC3H1	97	94.657	Felis_catus
ENSMAUG00000020864	Rc3h1	94	85.458	ENSFALG00000002947	RC3H1	88	84.746	Ficedula_albicollis
ENSMAUG00000020864	Rc3h1	93	93.857	ENSFDAG00000013303	RC3H1	88	94.159	Fukomys_damarensis
ENSMAUG00000020864	Rc3h1	100	83.904	ENSGALG00000004587	RC3H1	100	83.333	Gallus_gallus
ENSMAUG00000020864	Rc3h1	100	83.904	ENSGAGG00000018194	RC3H1	100	84.181	Gopherus_agassizii
ENSMAUG00000020864	Rc3h1	100	83.781	ENSGGOG00000005735	RC3H1	100	83.781	Gorilla_gorilla
ENSMAUG00000020864	Rc3h1	87	87.821	ENSHGLG00000004183	-	85	87.821	Heterocephalus_glaber_female
ENSMAUG00000020864	Rc3h1	93	93.555	ENSHGLG00100008577	RC3H1	88	93.958	Heterocephalus_glaber_male
ENSMAUG00000020864	Rc3h1	93	94.052	ENSSTOG00000016033	RC3H1	88	94.657	Ictidomys_tridecemlineatus
ENSMAUG00000020864	Rc3h1	93	94.854	ENSJJAG00000018915	Rc3h1	88	94.854	Jaculus_jaculus
ENSMAUG00000020864	Rc3h1	93	77.077	ENSLACG00000016186	RC3H1	100	77.941	Latimeria_chalumnae
ENSMAUG00000020864	Rc3h1	93	94.355	ENSLAFG00000004367	RC3H1	90	94.859	Loxodonta_africana
ENSMAUG00000020864	Rc3h1	100	93.952	ENSMFAG00000033725	RC3H1	97	94.456	Macaca_fascicularis
ENSMAUG00000020864	Rc3h1	100	94.052	ENSMMUG00000000630	RC3H1	97	94.556	Macaca_mulatta
ENSMAUG00000020864	Rc3h1	100	94.052	ENSMNEG00000035968	RC3H1	97	94.556	Macaca_nemestrina
ENSMAUG00000020864	Rc3h1	100	93.952	ENSMLEG00000037455	RC3H1	97	94.456	Mandrillus_leucophaeus
ENSMAUG00000020864	Rc3h1	93	94.153	ENSMICG00000003000	RC3H1	88	94.657	Microcebus_murinus
ENSMAUG00000020864	Rc3h1	86	96.605	ENSMOCG00000016587	Rc3h1	85	96.605	Microtus_ochrogaster
ENSMAUG00000020864	Rc3h1	94	90.644	ENSMODG00000004289	RC3H1	88	90.644	Monodelphis_domestica
ENSMAUG00000020864	Rc3h1	93	96.263	MGP_CAROLIEiJ_G0014756	Rc3h1	88	96.263	Mus_caroli
ENSMAUG00000020864	Rc3h1	100	96.162	ENSMUSG00000040423	Rc3h1	97	96.162	Mus_musculus
ENSMAUG00000020864	Rc3h1	100	96.061	MGP_PahariEiJ_G0027992	Rc3h1	97	96.061	Mus_pahari
ENSMAUG00000020864	Rc3h1	100	96.061	MGP_SPRETEiJ_G0015563	Rc3h1	97	96.061	Mus_spretus
ENSMAUG00000020864	Rc3h1	93	93.952	ENSMPUG00000004747	RC3H1	97	93.952	Mustela_putorius_furo
ENSMAUG00000020864	Rc3h1	100	92.735	ENSMLUG00000011127	RC3H1	97	93.239	Myotis_lucifugus
ENSMAUG00000020864	Rc3h1	93	96.465	ENSNGAG00000011135	Rc3h1	88	96.465	Nannospalax_galili
ENSMAUG00000020864	Rc3h1	93	93.952	ENSNLEG00000015327	RC3H1	88	94.456	Nomascus_leucogenys
ENSMAUG00000020864	Rc3h1	98	82.863	ENSOPRG00000013068	RC3H1	92	83.367	Ochotona_princeps
ENSMAUG00000020864	Rc3h1	100	93.952	ENSODEG00000014185	RC3H1	97	93.952	Octodon_degus
ENSMAUG00000020864	Rc3h1	100	89.531	ENSOANG00000000924	RC3H1	97	89.531	Ornithorhynchus_anatinus
ENSMAUG00000020864	Rc3h1	94	93.058	ENSOCUG00000004930	RC3H1	88	93.561	Oryctolagus_cuniculus
ENSMAUG00000020864	Rc3h1	93	86.419	ENSOGAG00000004044	RC3H1	88	86.419	Otolemur_garnettii
ENSMAUG00000020864	Rc3h1	100	93.273	ENSOARG00000013011	RC3H1	97	93.775	Ovis_aries
ENSMAUG00000020864	Rc3h1	100	93.851	ENSPPAG00000039253	RC3H1	97	94.355	Pan_paniscus
ENSMAUG00000020864	Rc3h1	100	86.465	ENSPPRG00000009007	RC3H1	100	86.732	Panthera_pardus
ENSMAUG00000020864	Rc3h1	93	93.681	ENSPTIG00000015326	RC3H1	97	94.383	Panthera_tigris_altaica
ENSMAUG00000020864	Rc3h1	100	93.851	ENSPTRG00000001702	RC3H1	97	94.355	Pan_troglodytes
ENSMAUG00000020864	Rc3h1	100	93.952	ENSPANG00000008886	RC3H1	97	94.456	Papio_anubis
ENSMAUG00000020864	Rc3h1	100	80.813	ENSPSIG00000016181	RC3H1	100	81.344	Pelodiscus_sinensis
ENSMAUG00000020864	Rc3h1	100	97.371	ENSPEMG00000011966	Rc3h1	97	97.371	Peromyscus_maniculatus_bairdii
ENSMAUG00000020864	Rc3h1	75	93.038	ENSPCIG00000002058	RC3H1	95	98.206	Phascolarctos_cinereus
ENSMAUG00000020864	Rc3h1	100	89.854	ENSPPYG00000000490	RC3H1	100	89.854	Pongo_abelii
ENSMAUG00000020864	Rc3h1	79	97.368	ENSPCAG00000010775	RC3H1	74	97.368	Procavia_capensis
ENSMAUG00000020864	Rc3h1	81	92.704	ENSPCOG00000021795	RC3H1	82	93.333	Propithecus_coquereli
ENSMAUG00000020864	Rc3h1	100	84.375	ENSPVAG00000007593	RC3H1	97	84.879	Pteropus_vampyrus
ENSMAUG00000020864	Rc3h1	92	64.194	ENSPNAG00000023439	rc3h1a	95	90.766	Pygocentrus_nattereri
ENSMAUG00000020864	Rc3h1	100	94.052	ENSRBIG00000037743	RC3H1	97	94.556	Rhinopithecus_bieti
ENSMAUG00000020864	Rc3h1	100	93.851	ENSRROG00000036546	RC3H1	97	94.355	Rhinopithecus_roxellana
ENSMAUG00000020864	Rc3h1	93	89.690	ENSSBOG00000010664	RC3H1	100	90.190	Saimiri_boliviensis_boliviensis
ENSMAUG00000020864	Rc3h1	94	90.040	ENSSHAG00000007589	RC3H1	88	90.040	Sarcophilus_harrisii
ENSMAUG00000020864	Rc3h1	79	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSMAUG00000020864	Rc3h1	94	82.652	ENSSPUG00000018472	RC3H1	88	83.234	Sphenodon_punctatus
ENSMAUG00000020864	Rc3h1	100	91.628	ENSSSCG00000015498	RC3H1	100	92.093	Sus_scrofa
ENSMAUG00000020864	Rc3h1	94	85.986	ENSTGUG00000004090	RC3H1	88	85.170	Taeniopygia_guttata
ENSMAUG00000020864	Rc3h1	90	95.640	ENSTBEG00000005015	RC3H1	85	95.640	Tupaia_belangeri
ENSMAUG00000020864	Rc3h1	100	94.456	ENSTTRG00000008572	RC3H1	97	95.243	Tursiops_truncatus
ENSMAUG00000020864	Rc3h1	93	93.851	ENSUAMG00000019525	RC3H1	97	93.851	Ursus_americanus
ENSMAUG00000020864	Rc3h1	93	94.456	ENSUMAG00000020087	RC3H1	97	94.456	Ursus_maritimus
ENSMAUG00000020864	Rc3h1	85	98.423	ENSVPAG00000002591	RC3H1	80	98.423	Vicugna_pacos
ENSMAUG00000020864	Rc3h1	94	93.587	ENSVVUG00000014201	RC3H1	93	96.681	Vulpes_vulpes
ENSMAUG00000020864	Rc3h1	100	72.592	ENSXETG00000020030	rc3h1	88	79.980	Xenopus_tropicalis