EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000021055 (Gene tree)
Gene ID: 101841866
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit A
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 7293 bases
Position: chrKB708137.1:7396936-7404228
Accession: 101841866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000024105	RNA_pol_Rpb1_5	PF04998.17	2e-31	1	1
ENSMAUP00000024105	RNA_pol_Rpb1_4	PF05000.17	1.5e-38	1	1
ENSMAUP00000024105	RNA_pol_Rpb1_2	PF00623.20	2.7e-75	1	1
ENSMAUP00000024105	RNA_pol_Rpb1_3	PF04983.18	3.4e-50	1	1
ENSMAUP00000024105	RNA_pol_Rpb1_1	PF04997.12	3.8e-103	1	1
ENSMAUP00000024105	RNA_pol_Rpb1_6	PF04992.14	1.5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000028119	-	2964	XM_013111776	ENSMAUP00000024105	987 (aa)	XP_012967230	-

Gene Model

Click here to download ENSMAUG00000021055's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000021055's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000021055	-	86	37.829	ENSMAUG00000016247	Polr3a	62	37.829

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000021055	-	53	100.000	ENSG00000181222	POLR2A	93	100.000	Homo_sapiens
ENSMAUG00000021055	-	99	94.292	ENSAPOG00000006552	polr2a	50	94.292	Acanthochromis_polyacanthus
ENSMAUG00000021055	-	99	99.694	ENSAMEG00000016265	-	50	99.694	Ailuropoda_melanoleuca
ENSMAUG00000021055	-	99	94.495	ENSACIG00000015982	polr2a	51	94.495	Amphilophus_citrinellus
ENSMAUG00000021055	-	99	94.190	ENSAOCG00000004255	polr2a	53	94.190	Amphiprion_ocellaris
ENSMAUG00000021055	-	99	94.190	ENSAPEG00000012623	polr2a	51	94.190	Amphiprion_percula
ENSMAUG00000021055	-	99	94.088	ENSATEG00000019644	polr2a	51	94.088	Anabas_testudineus
ENSMAUG00000021055	-	99	98.063	ENSACAG00000014561	POLR2A	50	98.063	Anolis_carolinensis
ENSMAUG00000021055	-	99	100.000	ENSANAG00000020093	-	51	100.000	Aotus_nancymaae
ENSMAUG00000021055	-	99	94.088	ENSACLG00000006735	polr2a	51	94.088	Astatotilapia_calliptera
ENSMAUG00000021055	-	99	94.903	ENSAMXG00000020046	polr2a	51	94.903	Astyanax_mexicanus
ENSMAUG00000021055	-	99	100.000	ENSBTAG00000046765	POLR2A	50	100.000	Bos_taurus
ENSMAUG00000021055	-	99	71.589	WBGene00000123	ama-1	53	71.690	Caenorhabditis_elegans
ENSMAUG00000021055	-	53	100.000	ENSCJAG00000015157	POLR2A	93	100.000	Callithrix_jacchus
ENSMAUG00000021055	-	99	99.898	ENSCAFG00000016532	POLR2A	55	99.898	Canis_familiaris
ENSMAUG00000021055	-	99	98.573	ENSCAFG00020007929	-	51	98.573	Canis_lupus_dingo
ENSMAUG00000021055	-	99	100.000	ENSCHIG00000027173	-	50	100.000	Capra_hircus
ENSMAUG00000021055	-	99	100.000	ENSTSYG00000012803	-	52	100.000	Carlito_syrichta
ENSMAUG00000021055	-	99	99.592	ENSCAPG00000001882	-	55	99.491	Cavia_aperea
ENSMAUG00000021055	-	99	99.592	ENSCPOG00000014812	-	55	99.592	Cavia_porcellus
ENSMAUG00000021055	-	99	100.000	ENSCCAG00000020938	-	51	100.000	Cebus_capucinus
ENSMAUG00000021055	-	99	99.898	ENSCATG00000013680	-	50	99.898	Cercocebus_atys
ENSMAUG00000021055	-	99	99.694	ENSCLAG00000012196	-	51	99.694	Chinchilla_lanigera
ENSMAUG00000021055	-	99	99.796	ENSCSAG00000011644	-	50	99.796	Chlorocebus_sabaeus
ENSMAUG00000021055	-	99	98.063	ENSCPBG00000012697	POLR2A	65	98.063	Chrysemys_picta_bellii
ENSMAUG00000021055	-	99	78.208	ENSCING00000007884	-	54	78.208	Ciona_intestinalis
ENSMAUG00000021055	-	99	78.106	ENSCSAVG00000008334	-	61	74.925	Ciona_savignyi
ENSMAUG00000021055	-	99	98.573	ENSCANG00000010622	-	50	98.573	Colobus_angolensis_palliatus
ENSMAUG00000021055	-	99	100.000	ENSCGRG00001003538	Polr2a	52	100.000	Cricetulus_griseus_chok1gshd
ENSMAUG00000021055	-	99	100.000	ENSCGRG00000012105	Polr2a	52	100.000	Cricetulus_griseus_crigri
ENSMAUG00000021055	-	99	93.578	ENSCSEG00000002635	polr2a	51	93.578	Cynoglossus_semilaevis
ENSMAUG00000021055	-	99	94.292	ENSCVAG00000005156	polr2a	50	94.292	Cyprinodon_variegatus
ENSMAUG00000021055	-	99	94.190	ENSDARG00000099966	polr2a	50	94.190	Danio_rerio
ENSMAUG00000021055	-	99	100.000	ENSDORG00000008667	Polr2a	51	100.000	Dipodomys_ordii
ENSMAUG00000021055	-	99	77.166	FBgn0003277	RpII215	52	77.166	Drosophila_melanogaster
ENSMAUG00000021055	-	99	88.991	ENSEBUG00000013967	polr2a	50	88.991	Eptatretus_burgeri
ENSMAUG00000021055	-	99	96.636	ENSEASG00005019114	-	51	96.636	Equus_asinus_asinus
ENSMAUG00000021055	-	99	100.000	ENSECAG00000018485	POLR2A	50	100.000	Equus_caballus
ENSMAUG00000021055	-	99	99.796	ENSEEUG00000001154	-	60	99.796	Erinaceus_europaeus
ENSMAUG00000021055	-	99	93.279	ENSELUG00000014284	polr2a	52	93.279	Esox_lucius
ENSMAUG00000021055	-	53	99.620	ENSFCAG00000046533	POLR2A	93	99.620	Felis_catus
ENSMAUG00000021055	-	99	100.000	ENSFDAG00000008287	-	50	100.000	Fukomys_damarensis
ENSMAUG00000021055	-	99	94.190	ENSFHEG00000001768	polr2a	51	94.190	Fundulus_heteroclitus
ENSMAUG00000021055	-	99	93.795	ENSGMOG00000007725	polr2a	59	93.795	Gadus_morhua
ENSMAUG00000021055	-	99	94.190	ENSGAFG00000005389	polr2a	55	94.190	Gambusia_affinis
ENSMAUG00000021055	-	99	93.986	ENSGACG00000019366	polr2a	59	93.986	Gasterosteus_aculeatus
ENSMAUG00000021055	-	99	98.777	ENSGGOG00000014800	-	93	98.113	Gorilla_gorilla
ENSMAUG00000021055	-	99	94.088	ENSHBUG00000018937	polr2a	52	94.088	Haplochromis_burtoni
ENSMAUG00000021055	-	99	100.000	ENSHGLG00000012381	POLR2A	51	100.000	Heterocephalus_glaber_female
ENSMAUG00000021055	-	99	100.000	ENSHGLG00100014843	POLR2A	51	100.000	Heterocephalus_glaber_male
ENSMAUG00000021055	-	99	93.578	ENSHCOG00000011874	polr2a	50	93.578	Hippocampus_comes
ENSMAUG00000021055	-	99	94.292	ENSIPUG00000002613	Polr2a	51	94.292	Ictalurus_punctatus
ENSMAUG00000021055	-	99	100.000	ENSSTOG00000001304	-	51	100.000	Ictidomys_tridecemlineatus
ENSMAUG00000021055	-	99	99.796	ENSJJAG00000013049	Polr2a	51	99.796	Jaculus_jaculus
ENSMAUG00000021055	-	99	92.690	ENSKMAG00000016343	polr2a	55	92.690	Kryptolebias_marmoratus
ENSMAUG00000021055	-	99	94.088	ENSLBEG00000027652	polr2a	51	94.088	Labrus_bergylta
ENSMAUG00000021055	-	99	95.821	ENSLACG00000012071	POLR2A	51	95.821	Latimeria_chalumnae
ENSMAUG00000021055	-	99	94.597	ENSLOCG00000013863	polr2a	52	94.597	Lepisosteus_oculatus
ENSMAUG00000021055	-	99	100.000	ENSLAFG00000008626	-	52	100.000	Loxodonta_africana
ENSMAUG00000021055	-	96	98.312	ENSMFAG00000007042	-	96	98.312	Macaca_fascicularis
ENSMAUG00000021055	-	99	99.898	ENSMMUG00000023620	-	51	99.898	Macaca_mulatta
ENSMAUG00000021055	-	99	99.898	ENSMNEG00000040407	-	51	99.898	Macaca_nemestrina
ENSMAUG00000021055	-	99	98.474	ENSMLEG00000030263	-	96	98.312	Mandrillus_leucophaeus
ENSMAUG00000021055	-	99	93.782	ENSMAMG00000003351	polr2a	51	93.782	Mastacembelus_armatus
ENSMAUG00000021055	-	99	94.088	ENSMZEG00005021429	polr2a	51	94.088	Maylandia_zebra
ENSMAUG00000021055	-	99	99.898	ENSMICG00000013372	-	95	98.837	Microcebus_murinus
ENSMAUG00000021055	-	99	100.000	ENSMOCG00000018279	Polr2a	50	100.000	Microtus_ochrogaster
ENSMAUG00000021055	-	99	93.986	ENSMMOG00000012515	polr2a	50	93.986	Mola_mola
ENSMAUG00000021055	-	99	99.286	ENSMODG00000007009	-	50	99.286	Monodelphis_domestica
ENSMAUG00000021055	-	99	94.292	ENSMALG00000008716	polr2a	54	94.292	Monopterus_albus
ENSMAUG00000021055	-	99	100.000	MGP_CAROLIEiJ_G0016587	Polr2a	51	100.000	Mus_caroli
ENSMAUG00000021055	-	99	100.000	ENSMUSG00000005198	Polr2a	51	100.000	Mus_musculus
ENSMAUG00000021055	-	99	100.000	MGP_PahariEiJ_G0017718	Polr2a	52	100.000	Mus_pahari
ENSMAUG00000021055	-	99	100.000	MGP_SPRETEiJ_G0017423	Polr2a	51	100.000	Mus_spretus
ENSMAUG00000021055	-	99	99.796	ENSMPUG00000009648	-	50	99.796	Mustela_putorius_furo
ENSMAUG00000021055	-	99	99.084	ENSMLUG00000009088	-	50	99.084	Myotis_lucifugus
ENSMAUG00000021055	-	99	100.000	ENSNGAG00000002543	Polr2a	51	100.000	Nannospalax_galili
ENSMAUG00000021055	-	99	94.190	ENSNBRG00000002005	polr2a	51	94.190	Neolamprologus_brichardi
ENSMAUG00000021055	-	99	100.000	ENSNLEG00000009460	-	51	100.000	Nomascus_leucogenys
ENSMAUG00000021055	-	99	92.966	ENSMEUG00000008611	-	58	92.966	Notamacropus_eugenii
ENSMAUG00000021055	-	99	99.898	ENSOPRG00000015116	-	62	99.898	Ochotona_princeps
ENSMAUG00000021055	-	99	99.694	ENSODEG00000017674	-	52	99.694	Octodon_degus
ENSMAUG00000021055	-	99	94.495	ENSONIG00000009231	polr2a	50	94.495	Oreochromis_niloticus
ENSMAUG00000021055	-	93	98.697	ENSOANG00000003303	-	97	98.697	Ornithorhynchus_anatinus
ENSMAUG00000021055	-	99	99.898	ENSOCUG00000017929	-	56	99.898	Oryctolagus_cuniculus
ENSMAUG00000021055	-	99	93.680	ENSORLG00000006431	polr2a	51	93.680	Oryzias_latipes
ENSMAUG00000021055	-	99	93.680	ENSORLG00020010235	polr2a	51	93.680	Oryzias_latipes_hni
ENSMAUG00000021055	-	99	93.782	ENSORLG00015007075	polr2a	51	93.782	Oryzias_latipes_hsok
ENSMAUG00000021055	-	99	93.782	ENSOMEG00000010713	polr2a	63	93.782	Oryzias_melastigma
ENSMAUG00000021055	-	99	99.796	ENSOGAG00000033608	-	50	99.796	Otolemur_garnettii
ENSMAUG00000021055	-	99	100.000	ENSOARG00000013874	-	52	100.000	Ovis_aries
ENSMAUG00000021055	-	99	100.000	ENSPPAG00000043734	-	51	100.000	Pan_paniscus
ENSMAUG00000021055	-	53	99.620	ENSPPRG00000000743	POLR2A	93	99.620	Panthera_pardus
ENSMAUG00000021055	-	53	99.049	ENSPTIG00000005583	POLR2A	96	99.049	Panthera_tigris_altaica
ENSMAUG00000021055	-	99	100.000	ENSPTRG00000008691	POLR2A	51	100.000	Pan_troglodytes
ENSMAUG00000021055	-	99	98.573	ENSPANG00000024099	-	51	98.573	Papio_anubis
ENSMAUG00000021055	-	99	93.082	ENSPKIG00000005727	polr2a	53	93.082	Paramormyrops_kingsleyae
ENSMAUG00000021055	-	99	96.945	ENSPSIG00000014006	POLR2A	60	96.945	Pelodiscus_sinensis
ENSMAUG00000021055	-	99	94.495	ENSPMGG00000019734	polr2a	61	94.495	Periophthalmus_magnuspinnatus
ENSMAUG00000021055	-	99	100.000	ENSPEMG00000012521	Polr2a	51	100.000	Peromyscus_maniculatus_bairdii
ENSMAUG00000021055	-	99	99.286	ENSPCIG00000028851	-	50	99.286	Phascolarctos_cinereus
ENSMAUG00000021055	-	99	94.190	ENSPFOG00000007890	polr2a	51	94.190	Poecilia_formosa
ENSMAUG00000021055	-	99	94.190	ENSPLAG00000007399	polr2a	53	94.190	Poecilia_latipinna
ENSMAUG00000021055	-	99	94.190	ENSPMEG00000002071	polr2a	52	94.190	Poecilia_mexicana
ENSMAUG00000021055	-	99	94.190	ENSPREG00000013122	polr2a	51	94.190	Poecilia_reticulata
ENSMAUG00000021055	-	99	100.000	ENSPPYG00000007924	-	50	100.000	Pongo_abelii
ENSMAUG00000021055	-	99	99.898	ENSPCOG00000025260	-	51	99.898	Propithecus_coquereli
ENSMAUG00000021055	-	99	100.000	ENSPVAG00000005069	-	50	100.000	Pteropus_vampyrus
ENSMAUG00000021055	-	99	94.190	ENSPNYG00000022340	polr2a	53	94.190	Pundamilia_nyererei
ENSMAUG00000021055	-	99	94.801	ENSPNAG00000011237	polr2a	50	94.801	Pygocentrus_nattereri
ENSMAUG00000021055	-	99	99.898	ENSRNOG00000028834	Polr2a	50	99.898	Rattus_norvegicus
ENSMAUG00000021055	-	99	99.898	ENSRBIG00000002471	-	52	99.898	Rhinopithecus_bieti
ENSMAUG00000021055	-	99	99.898	ENSRROG00000029583	-	50	99.898	Rhinopithecus_roxellana
ENSMAUG00000021055	-	99	53.340	YDL140C	RPO21	56	53.340	Saccharomyces_cerevisiae
ENSMAUG00000021055	-	99	100.000	ENSSBOG00000000808	-	51	100.000	Saimiri_boliviensis_boliviensis
ENSMAUG00000021055	-	99	99.286	ENSSHAG00000002858	-	51	99.286	Sarcophilus_harrisii
ENSMAUG00000021055	-	99	94.292	ENSSFOG00015023275	polr2a	51	94.292	Scleropages_formosus
ENSMAUG00000021055	-	99	93.578	ENSSMAG00000009137	polr2a	50	93.578	Scophthalmus_maximus
ENSMAUG00000021055	-	99	94.088	ENSSDUG00000020466	polr2a	51	94.088	Seriola_dumerili
ENSMAUG00000021055	-	99	94.088	ENSSLDG00000020613	polr2a	51	94.088	Seriola_lalandi_dorsalis
ENSMAUG00000021055	-	99	99.796	ENSSARG00000005875	-	59	99.796	Sorex_araneus
ENSMAUG00000021055	-	53	97.909	ENSSPUG00000017777	-	99	97.909	Sphenodon_punctatus
ENSMAUG00000021055	-	99	94.088	ENSSPAG00000016741	polr2a	50	94.088	Stegastes_partitus
ENSMAUG00000021055	-	99	99.592	ENSSSCG00000028278	-	50	99.592	Sus_scrofa
ENSMAUG00000021055	-	99	92.966	ENSTRUG00000012320	polr2a	51	92.966	Takifugu_rubripes
ENSMAUG00000021055	-	99	92.151	ENSTNIG00000010136	polr2a	56	92.151	Tetraodon_nigroviridis
ENSMAUG00000021055	-	99	97.044	ENSTTRG00000014273	-	50	97.044	Tursiops_truncatus
ENSMAUG00000021055	-	99	99.898	ENSUAMG00000014866	-	55	99.898	Ursus_americanus
ENSMAUG00000021055	-	99	99.898	ENSVVUG00000027878	-	51	99.898	Vulpes_vulpes
ENSMAUG00000021055	-	99	96.640	ENSXETG00000012465	polr2a	50	96.640	Xenopus_tropicalis
ENSMAUG00000021055	-	99	94.088	ENSXCOG00000001804	polr2a	55	94.088	Xiphophorus_couchianus
ENSMAUG00000021055	-	99	94.088	ENSXMAG00000015687	polr2a	51	94.088	Xiphophorus_maculatus