EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000021508 (Gene tree)
Gene ID: 101830060
Gene Symbol: Rrp1b
Alias: 2600005C20Rik
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 25243 bases
Position: chrKB708151.1:1733928-1759170
Accession: 101830060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000024758	Nop52	PF05997.12	6.4e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000028778	-	2157	XM_005070691	ENSMAUP00000024758	718 (aa)	XP_005070748	-

Gene Model

Click here to download ENSMAUG00000021508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000021508's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000021508	Rrp1b	100	63.289	ENSG00000160208	RRP1B	100	63.289	Homo_sapiens
ENSMAUG00000021508	Rrp1b	98	53.235	ENSAMEG00000011401	RRP1B	98	52.894	Ailuropoda_melanoleuca
ENSMAUG00000021508	Rrp1b	63	51.351	ENSAOCG00000017894	-	88	58.163	Amphiprion_ocellaris
ENSMAUG00000021508	Rrp1b	100	61.316	ENSANAG00000034889	RRP1B	100	61.316	Aotus_nancymaae
ENSMAUG00000021508	Rrp1b	100	57.916	ENSBTAG00000017418	RRP1B	100	57.916	Bos_taurus
ENSMAUG00000021508	Rrp1b	100	60.474	ENSCJAG00000017077	RRP1B	100	60.606	Callithrix_jacchus
ENSMAUG00000021508	Rrp1b	94	58.898	ENSCAFG00000010621	RRP1B	99	59.181	Canis_familiaris
ENSMAUG00000021508	Rrp1b	100	59.363	ENSCAFG00020018901	RRP1B	100	59.628	Canis_lupus_dingo
ENSMAUG00000021508	Rrp1b	100	59.313	ENSCHIG00000021519	RRP1B	100	59.445	Capra_hircus
ENSMAUG00000021508	Rrp1b	100	56.707	ENSCPOG00000002396	RRP1B	100	56.441	Cavia_porcellus
ENSMAUG00000021508	Rrp1b	100	61.589	ENSCCAG00000029384	RRP1B	100	61.589	Cebus_capucinus
ENSMAUG00000021508	Rrp1b	100	63.816	ENSCATG00000017423	RRP1B	100	63.816	Cercocebus_atys
ENSMAUG00000021508	Rrp1b	100	57.614	ENSCLAG00000005622	RRP1B	100	57.360	Chinchilla_lanigera
ENSMAUG00000021508	Rrp1b	100	63.553	ENSCSAG00000007961	RRP1B	100	63.553	Chlorocebus_sabaeus
ENSMAUG00000021508	Rrp1b	50	54.124	ENSCHOG00000002426	-	54	59.639	Choloepus_hoffmanni
ENSMAUG00000021508	Rrp1b	100	63.158	ENSCANG00000040952	RRP1B	100	63.158	Colobus_angolensis_palliatus
ENSMAUG00000021508	Rrp1b	100	86.309	ENSCGRG00001010889	-	100	87.114	Cricetulus_griseus_chok1gshd
ENSMAUG00000021508	Rrp1b	100	86.892	ENSCGRG00001023882	-	100	87.703	Cricetulus_griseus_chok1gshd
ENSMAUG00000021508	Rrp1b	94	86.325	ENSCGRG00000001553	Rrp1b	97	86.202	Cricetulus_griseus_crigri
ENSMAUG00000021508	Rrp1b	55	55.914	ENSCSEG00000020711	-	84	44.375	Cynoglossus_semilaevis
ENSMAUG00000021508	Rrp1b	51	49.875	ENSDNOG00000019880	RRP1	71	53.030	Dasypus_novemcinctus
ENSMAUG00000021508	Rrp1b	100	56.824	ENSDNOG00000032774	RRP1B	100	56.824	Dasypus_novemcinctus
ENSMAUG00000021508	Rrp1b	93	60.029	ENSDORG00000005496	Rrp1b	100	61.216	Dipodomys_ordii
ENSMAUG00000021508	Rrp1b	93	83.529	ENSETEG00000019489	RRP1B	93	83.529	Echinops_telfairi
ENSMAUG00000021508	Rrp1b	100	61.741	ENSEASG00005001687	RRP1B	100	61.346	Equus_asinus_asinus
ENSMAUG00000021508	Rrp1b	100	61.478	ENSECAG00000018018	RRP1B	100	61.082	Equus_caballus
ENSMAUG00000021508	Rrp1b	54	43.890	ENSECAG00000015703	RRP1	73	52.615	Equus_caballus
ENSMAUG00000021508	Rrp1b	62	54.762	ENSELUG00000015885	-	89	41.212	Esox_lucius
ENSMAUG00000021508	Rrp1b	100	58.862	ENSFCAG00000010272	RRP1B	100	59.259	Felis_catus
ENSMAUG00000021508	Rrp1b	52	46.891	ENSFCAG00000008434	RRP1	71	51.420	Felis_catus
ENSMAUG00000021508	Rrp1b	96	57.741	ENSFDAG00000010899	RRP1B	96	58.078	Fukomys_damarensis
ENSMAUG00000021508	Rrp1b	53	45.685	ENSFDAG00000013728	RRP1	73	49.235	Fukomys_damarensis
ENSMAUG00000021508	Rrp1b	60	47.273	ENSGMOG00000001953	-	61	47.706	Gadus_morhua
ENSMAUG00000021508	Rrp1b	53	37.659	ENSGACG00000001438	rrp1	99	31.720	Gasterosteus_aculeatus
ENSMAUG00000021508	Rrp1b	100	63.158	ENSGGOG00000012069	RRP1B	100	63.158	Gorilla_gorilla
ENSMAUG00000021508	Rrp1b	99	60.428	ENSHGLG00000004968	RRP1B	100	59.893	Heterocephalus_glaber_female
ENSMAUG00000021508	Rrp1b	85	62.422	ENSHGLG00100002232	RRP1B	98	54.508	Heterocephalus_glaber_male
ENSMAUG00000021508	Rrp1b	63	44.366	ENSHCOG00000018388	-	57	44.366	Hippocampus_comes
ENSMAUG00000021508	Rrp1b	58	48.485	ENSIPUG00000000673	-	66	40.115	Ictalurus_punctatus
ENSMAUG00000021508	Rrp1b	99	63.710	ENSSTOG00000011790	RRP1B	96	65.339	Ictidomys_tridecemlineatus
ENSMAUG00000021508	Rrp1b	51	47.342	ENSSTOG00000011116	RRP1	73	51.385	Ictidomys_tridecemlineatus
ENSMAUG00000021508	Rrp1b	100	63.279	ENSJJAG00000021279	Rrp1b	100	63.818	Jaculus_jaculus
ENSMAUG00000021508	Rrp1b	57	44.755	ENSJJAG00000018886	Rrp1	75	50.148	Jaculus_jaculus
ENSMAUG00000021508	Rrp1b	99	38.401	ENSLACG00000017332	-	99	39.610	Latimeria_chalumnae
ENSMAUG00000021508	Rrp1b	68	44.970	ENSLOCG00000004064	-	100	34.805	Lepisosteus_oculatus
ENSMAUG00000021508	Rrp1b	88	56.325	ENSLAFG00000000766	RRP1B	99	56.297	Loxodonta_africana
ENSMAUG00000021508	Rrp1b	100	63.947	ENSMFAG00000039152	RRP1B	100	63.947	Macaca_fascicularis
ENSMAUG00000021508	Rrp1b	100	61.316	ENSMMUG00000000104	RRP1B	100	61.316	Macaca_mulatta
ENSMAUG00000021508	Rrp1b	51	49.616	ENSMNEG00000031210	RRP1	70	53.106	Macaca_nemestrina
ENSMAUG00000021508	Rrp1b	100	63.995	ENSMNEG00000034269	RRP1B	100	63.995	Macaca_nemestrina
ENSMAUG00000021508	Rrp1b	100	60.550	ENSMLEG00000040044	RRP1B	99	63.040	Mandrillus_leucophaeus
ENSMAUG00000021508	Rrp1b	52	46.465	ENSMICG00000004700	RRP1	87	47.409	Microcebus_murinus
ENSMAUG00000021508	Rrp1b	100	62.319	ENSMICG00000004686	RRP1B	100	62.319	Microcebus_murinus
ENSMAUG00000021508	Rrp1b	100	78.969	ENSMOCG00000001117	Rrp1b	100	79.512	Microtus_ochrogaster
ENSMAUG00000021508	Rrp1b	100	53.806	ENSMODG00000021033	RRP1B	100	54.915	Monodelphis_domestica
ENSMAUG00000021508	Rrp1b	100	76.902	MGP_CAROLIEiJ_G0021376	Rrp1b	100	76.902	Mus_caroli
ENSMAUG00000021508	Rrp1b	100	77.428	ENSMUSG00000058392	Rrp1b	100	78.065	Mus_musculus
ENSMAUG00000021508	Rrp1b	100	77.297	MGP_PahariEiJ_G0023695	Rrp1b	100	78.108	Mus_pahari
ENSMAUG00000021508	Rrp1b	100	76.016	MGP_SPRETEiJ_G0022290	Rrp1b	100	76.829	Mus_spretus
ENSMAUG00000021508	Rrp1b	83	52.598	ENSMPUG00000009810	RRP1B	99	52.707	Mustela_putorius_furo
ENSMAUG00000021508	Rrp1b	99	60.343	ENSMLUG00000007738	RRP1B	99	60.211	Myotis_lucifugus
ENSMAUG00000021508	Rrp1b	100	71.159	ENSNGAG00000021073	Rrp1b	100	70.850	Nannospalax_galili
ENSMAUG00000021508	Rrp1b	51	49.227	ENSNLEG00000034734	RRP1	70	52.761	Nomascus_leucogenys
ENSMAUG00000021508	Rrp1b	100	62.069	ENSNLEG00000001490	RRP1B	100	62.069	Nomascus_leucogenys
ENSMAUG00000021508	Rrp1b	63	78.151	ENSMEUG00000003226	-	73	78.889	Notamacropus_eugenii
ENSMAUG00000021508	Rrp1b	100	58.470	ENSODEG00000013177	RRP1B	100	58.276	Octodon_degus
ENSMAUG00000021508	Rrp1b	99	45.575	ENSOANG00000006470	RRP1B	99	45.932	Ornithorhynchus_anatinus
ENSMAUG00000021508	Rrp1b	94	53.390	ENSOCUG00000025931	RRP1B	100	53.672	Oryctolagus_cuniculus
ENSMAUG00000021508	Rrp1b	61	46.825	ENSORLG00020007199	-	51	46.923	Oryzias_latipes_hni
ENSMAUG00000021508	Rrp1b	61	46.605	ENSORLG00015004425	-	51	46.875	Oryzias_latipes_hsok
ENSMAUG00000021508	Rrp1b	61	48.000	ENSOMEG00000016910	-	53	48.780	Oryzias_melastigma
ENSMAUG00000021508	Rrp1b	69	78.632	ENSOGAG00000009872	RRP1B	87	78.632	Otolemur_garnettii
ENSMAUG00000021508	Rrp1b	94	57.063	ENSOARG00000011314	RRP1B	100	57.203	Ovis_aries
ENSMAUG00000021508	Rrp1b	94	62.483	ENSPPAG00000035319	RRP1B	99	62.396	Pan_paniscus
ENSMAUG00000021508	Rrp1b	51	49.114	ENSPPAG00000029050	RRP1	70	54.259	Pan_paniscus
ENSMAUG00000021508	Rrp1b	52	47.340	ENSPPRG00000010656	RRP1	72	51.420	Panthera_pardus
ENSMAUG00000021508	Rrp1b	100	58.235	ENSPPRG00000010356	RRP1B	100	58.971	Panthera_pardus
ENSMAUG00000021508	Rrp1b	72	70.629	ENSPTIG00000016894	RRP1B	99	59.420	Panthera_tigris_altaica
ENSMAUG00000021508	Rrp1b	100	63.158	ENSPTRG00000013958	RRP1B	100	63.158	Pan_troglodytes
ENSMAUG00000021508	Rrp1b	100	63.684	ENSPANG00000011090	RRP1B	100	63.684	Papio_anubis
ENSMAUG00000021508	Rrp1b	62	52.941	ENSPKIG00000003422	-	55	52.941	Paramormyrops_kingsleyae
ENSMAUG00000021508	Rrp1b	100	82.973	ENSPEMG00000022490	Rrp1b	100	83.649	Peromyscus_maniculatus_bairdii
ENSMAUG00000021508	Rrp1b	100	55.601	ENSPCIG00000015513	RRP1B	100	55.585	Phascolarctos_cinereus
ENSMAUG00000021508	Rrp1b	52	39.012	ENSPFOG00000007424	-	99	33.796	Poecilia_formosa
ENSMAUG00000021508	Rrp1b	67	46.269	ENSPMEG00000007042	-	54	45.113	Poecilia_mexicana
ENSMAUG00000021508	Rrp1b	61	46.970	ENSPREG00000015673	-	54	46.970	Poecilia_reticulata
ENSMAUG00000021508	Rrp1b	100	63.421	ENSPPYG00000011470	RRP1B	100	63.421	Pongo_abelii
ENSMAUG00000021508	Rrp1b	51	48.974	ENSPPYG00000011474	RRP1	70	53.231	Pongo_abelii
ENSMAUG00000021508	Rrp1b	84	83.158	ENSPCAG00000013723	RRP1B	91	83.158	Procavia_capensis
ENSMAUG00000021508	Rrp1b	100	63.241	ENSPCOG00000017927	RRP1B	100	63.241	Propithecus_coquereli
ENSMAUG00000021508	Rrp1b	99	54.474	ENSPVAG00000001436	RRP1B	99	54.677	Pteropus_vampyrus
ENSMAUG00000021508	Rrp1b	100	78.378	ENSRNOG00000001194	Rrp1b	100	78.378	Rattus_norvegicus
ENSMAUG00000021508	Rrp1b	100	60.578	ENSRBIG00000041689	RRP1B	100	60.578	Rhinopithecus_bieti
ENSMAUG00000021508	Rrp1b	100	63.732	ENSRROG00000031499	RRP1B	100	63.732	Rhinopithecus_roxellana
ENSMAUG00000021508	Rrp1b	94	59.677	ENSSBOG00000034727	RRP1B	99	59.543	Saimiri_boliviensis_boliviensis
ENSMAUG00000021508	Rrp1b	100	55.294	ENSSHAG00000017789	RRP1B	100	55.352	Sarcophilus_harrisii
ENSMAUG00000021508	Rrp1b	62	50.382	ENSSMAG00000016847	-	81	43.373	Scophthalmus_maximus
ENSMAUG00000021508	Rrp1b	62	48.438	ENSSDUG00000000551	-	56	46.575	Seriola_dumerili
ENSMAUG00000021508	Rrp1b	62	48.438	ENSSLDG00000002538	-	56	46.575	Seriola_lalandi_dorsalis
ENSMAUG00000021508	Rrp1b	78	64.388	ENSSARG00000003108	-	80	64.029	Sorex_araneus
ENSMAUG00000021508	Rrp1b	100	42.288	ENSSPUG00000002834	RRP1B	100	42.273	Sphenodon_punctatus
ENSMAUG00000021508	Rrp1b	100	53.491	ENSSSCG00000021698	RRP1B	100	53.907	Sus_scrofa
ENSMAUG00000021508	Rrp1b	58	50.526	ENSTNIG00000005053	rrp1	66	50.526	Tetraodon_nigroviridis
ENSMAUG00000021508	Rrp1b	79	65.181	ENSTBEG00000000422	RRP1B	100	67.456	Tupaia_belangeri
ENSMAUG00000021508	Rrp1b	100	56.689	ENSTTRG00000000723	RRP1B	100	56.728	Tursiops_truncatus
ENSMAUG00000021508	Rrp1b	100	58.099	ENSUAMG00000026765	RRP1B	100	57.390	Ursus_americanus
ENSMAUG00000021508	Rrp1b	63	76.984	ENSUMAG00000025510	RRP1B	92	76.190	Ursus_maritimus
ENSMAUG00000021508	Rrp1b	94	58.956	ENSVVUG00000024509	RRP1B	99	59.238	Vulpes_vulpes
ENSMAUG00000021508	Rrp1b	64	44.531	ENSXETG00000013683	rrp1b	64	49.038	Xenopus_tropicalis
ENSMAUG00000021508	Rrp1b	61	45.588	ENSXMAG00000023123	-	54	54.082	Xiphophorus_maculatus