EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000021618 (Gene tree)
Gene ID: 101829067
Gene Symbol: Tnrc6c
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 69570 bases
Position: chrKB708147.1:4061167-4130736
Accession: 101829067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000024911	Ago_hook	PF10427.9	4.4e-21	1	1
ENSMAUP00000024911	RRM_1	PF00076.22	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000028931	-	8221	XM_005069862	ENSMAUP00000024911	1690 (aa)	XP_005069919	A0A1U7QL69

Gene Model

Click here to download ENSMAUG00000021618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000021618's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000021618	Tnrc6c	97	40.112	ENSMAUG00000012750	Tnrc6a	84	39.854
ENSMAUG00000021618	Tnrc6c	93	35.364	ENSMAUG00000016123	Tnrc6b	81	34.335

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000021618	Tnrc6c	100	89.340	ENSG00000078687	TNRC6C	100	89.517	Homo_sapiens
ENSMAUG00000021618	Tnrc6c	80	54.229	ENSAPOG00000019749	tnrc6c1	92	50.057	Acanthochromis_polyacanthus
ENSMAUG00000021618	Tnrc6c	100	84.514	ENSAMEG00000013756	TNRC6C	96	84.514	Ailuropoda_melanoleuca
ENSMAUG00000021618	Tnrc6c	88	50.171	ENSACIG00000008075	tnrc6c1	89	51.639	Amphilophus_citrinellus
ENSMAUG00000021618	Tnrc6c	75	68.710	ENSAOCG00000023968	tnrc6c1	92	50.452	Amphiprion_ocellaris
ENSMAUG00000021618	Tnrc6c	80	53.760	ENSAPEG00000009020	tnrc6c1	92	50.395	Amphiprion_percula
ENSMAUG00000021618	Tnrc6c	100	81.803	ENSAPLG00000005456	TNRC6C	90	81.699	Anas_platyrhynchos
ENSMAUG00000021618	Tnrc6c	100	82.834	ENSACAG00000016198	TNRC6C	88	82.604	Anolis_carolinensis
ENSMAUG00000021618	Tnrc6c	100	88.863	ENSANAG00000021554	TNRC6C	100	89.275	Aotus_nancymaae
ENSMAUG00000021618	Tnrc6c	100	47.078	ENSACLG00000000424	tnrc6c1	90	50.508	Astatotilapia_calliptera
ENSMAUG00000021618	Tnrc6c	100	85.807	ENSBTAG00000018658	TNRC6C	100	86.337	Bos_taurus
ENSMAUG00000021618	Tnrc6c	100	89.157	ENSCJAG00000019431	TNRC6C	100	89.216	Callithrix_jacchus
ENSMAUG00000021618	Tnrc6c	100	86.455	ENSCAFG00000005224	TNRC6C	96	79.679	Canis_familiaris
ENSMAUG00000021618	Tnrc6c	100	88.974	ENSCAFG00020006661	TNRC6C	100	87.205	Canis_lupus_dingo
ENSMAUG00000021618	Tnrc6c	100	85.310	ENSCHIG00000026004	TNRC6C	100	84.915	Capra_hircus
ENSMAUG00000021618	Tnrc6c	100	88.286	ENSTSYG00000005403	TNRC6C	100	88.402	Carlito_syrichta
ENSMAUG00000021618	Tnrc6c	100	84.561	ENSCAPG00000007307	TNRC6C	89	84.829	Cavia_aperea
ENSMAUG00000021618	Tnrc6c	100	88.725	ENSCPOG00000000467	TNRC6C	97	89.138	Cavia_porcellus
ENSMAUG00000021618	Tnrc6c	100	89.570	ENSCCAG00000030524	TNRC6C	100	89.629	Cebus_capucinus
ENSMAUG00000021618	Tnrc6c	100	89.511	ENSCATG00000033135	TNRC6C	100	89.570	Cercocebus_atys
ENSMAUG00000021618	Tnrc6c	100	90.850	ENSCLAG00000011139	TNRC6C	89	90.909	Chinchilla_lanigera
ENSMAUG00000021618	Tnrc6c	100	87.536	ENSCSAG00000005167	TNRC6C	89	87.651	Chlorocebus_sabaeus
ENSMAUG00000021618	Tnrc6c	71	88.346	ENSCHOG00000000088	TNRC6C	68	87.599	Choloepus_hoffmanni
ENSMAUG00000021618	Tnrc6c	100	84.806	ENSCPBG00000027960	TNRC6C	100	85.159	Chrysemys_picta_bellii
ENSMAUG00000021618	Tnrc6c	100	89.216	ENSCANG00000041771	TNRC6C	100	89.275	Colobus_angolensis_palliatus
ENSMAUG00000021618	Tnrc6c	100	95.089	ENSCGRG00001022686	Tnrc6c	100	94.083	Cricetulus_griseus_chok1gshd
ENSMAUG00000021618	Tnrc6c	100	95.089	ENSCGRG00000018041	Tnrc6c	100	94.083	Cricetulus_griseus_crigri
ENSMAUG00000021618	Tnrc6c	100	46.375	ENSCSEG00000012744	tnrc6c1	88	49.002	Cynoglossus_semilaevis
ENSMAUG00000021618	Tnrc6c	94	54.403	ENSDARG00000076847	tnrc6c1	96	54.513	Danio_rerio
ENSMAUG00000021618	Tnrc6c	100	85.204	ENSDNOG00000003247	TNRC6C	91	85.435	Dasypus_novemcinctus
ENSMAUG00000021618	Tnrc6c	100	87.123	ENSDORG00000004558	Tnrc6c	100	86.887	Dipodomys_ordii
ENSMAUG00000021618	Tnrc6c	90	80.397	ENSETEG00000005527	TNRC6C	87	80.484	Echinops_telfairi
ENSMAUG00000021618	Tnrc6c	100	88.437	ENSEASG00005004799	TNRC6C	100	88.378	Equus_asinus_asinus
ENSMAUG00000021618	Tnrc6c	100	88.437	ENSECAG00000012486	TNRC6C	90	88.378	Equus_caballus
ENSMAUG00000021618	Tnrc6c	96	87.985	ENSEEUG00000010008	TNRC6C	93	86.876	Erinaceus_europaeus
ENSMAUG00000021618	Tnrc6c	100	86.772	ENSFCAG00000028358	TNRC6C	100	86.596	Felis_catus
ENSMAUG00000021618	Tnrc6c	100	81.423	ENSFALG00000000848	TNRC6C	100	81.310	Ficedula_albicollis
ENSMAUG00000021618	Tnrc6c	100	89.315	ENSFDAG00000010368	TNRC6C	97	89.847	Fukomys_damarensis
ENSMAUG00000021618	Tnrc6c	94	46.920	ENSFHEG00000002936	tnrc6c1	92	48.517	Fundulus_heteroclitus
ENSMAUG00000021618	Tnrc6c	100	85.723	ENSGALG00000001725	TNRC6C	100	85.605	Gallus_gallus
ENSMAUG00000021618	Tnrc6c	100	49.283	ENSGAFG00000019019	tnrc6c1	97	49.972	Gambusia_affinis
ENSMAUG00000021618	Tnrc6c	80	53.348	ENSGACG00000012320	tnrc6c1	86	50.088	Gasterosteus_aculeatus
ENSMAUG00000021618	Tnrc6c	100	84.108	ENSGAGG00000022043	TNRC6C	95	84.403	Gopherus_agassizii
ENSMAUG00000021618	Tnrc6c	100	88.810	ENSGGOG00000011304	TNRC6C	100	88.810	Gorilla_gorilla
ENSMAUG00000021618	Tnrc6c	94	47.901	ENSHBUG00000010846	tnrc6c1	90	50.785	Haplochromis_burtoni
ENSMAUG00000021618	Tnrc6c	100	90.496	ENSHGLG00000004809	TNRC6C	89	90.555	Heterocephalus_glaber_female
ENSMAUG00000021618	Tnrc6c	100	90.673	ENSHGLG00100012597	TNRC6C	89	90.389	Heterocephalus_glaber_male
ENSMAUG00000021618	Tnrc6c	100	52.676	ENSIPUG00000000818	tnrc6c1	89	52.705	Ictalurus_punctatus
ENSMAUG00000021618	Tnrc6c	100	89.917	ENSSTOG00000009101	TNRC6C	97	89.682	Ictidomys_tridecemlineatus
ENSMAUG00000021618	Tnrc6c	100	91.420	ENSJJAG00000017055	Tnrc6c	89	90.947	Jaculus_jaculus
ENSMAUG00000021618	Tnrc6c	94	50.551	ENSKMAG00000021023	tnrc6c1	97	50.473	Kryptolebias_marmoratus
ENSMAUG00000021618	Tnrc6c	100	73.641	ENSLACG00000015283	TNRC6C	97	73.816	Latimeria_chalumnae
ENSMAUG00000021618	Tnrc6c	98	57.590	ENSLOCG00000013377	tnrc6c1	87	58.158	Lepisosteus_oculatus
ENSMAUG00000021618	Tnrc6c	100	88.371	ENSLAFG00000011122	TNRC6C	90	88.253	Loxodonta_africana
ENSMAUG00000021618	Tnrc6c	100	89.570	ENSMFAG00000043943	TNRC6C	100	89.629	Macaca_fascicularis
ENSMAUG00000021618	Tnrc6c	100	89.570	ENSMMUG00000011924	TNRC6C	100	89.629	Macaca_mulatta
ENSMAUG00000021618	Tnrc6c	100	89.511	ENSMNEG00000030405	TNRC6C	100	89.570	Macaca_nemestrina
ENSMAUG00000021618	Tnrc6c	100	89.570	ENSMLEG00000033436	TNRC6C	100	89.629	Mandrillus_leucophaeus
ENSMAUG00000021618	Tnrc6c	88	52.219	ENSMAMG00000023613	tnrc6c1	97	49.971	Mastacembelus_armatus
ENSMAUG00000021618	Tnrc6c	100	47.078	ENSMZEG00005010920	tnrc6c1	91	49.538	Maylandia_zebra
ENSMAUG00000021618	Tnrc6c	100	75.989	ENSMGAG00000003906	TNRC6C	90	75.989	Meleagris_gallopavo
ENSMAUG00000021618	Tnrc6c	100	90.395	ENSMICG00000003952	TNRC6C	100	90.454	Microcebus_murinus
ENSMAUG00000021618	Tnrc6c	100	96.568	ENSMOCG00000015879	Tnrc6c	97	96.095	Microtus_ochrogaster
ENSMAUG00000021618	Tnrc6c	79	54.265	ENSMMOG00000005203	tnrc6c1	100	49.775	Mola_mola
ENSMAUG00000021618	Tnrc6c	100	84.847	ENSMODG00000001785	TNRC6C	89	84.375	Monodelphis_domestica
ENSMAUG00000021618	Tnrc6c	100	95.148	MGP_CAROLIEiJ_G0017465	Tnrc6c	97	94.675	Mus_caroli
ENSMAUG00000021618	Tnrc6c	100	95.089	ENSMUSG00000025571	Tnrc6c	97	94.615	Mus_musculus
ENSMAUG00000021618	Tnrc6c	100	95.089	MGP_PahariEiJ_G0018593	Tnrc6c	97	94.615	Mus_pahari
ENSMAUG00000021618	Tnrc6c	100	95.148	MGP_SPRETEiJ_G0018309	Tnrc6c	97	94.675	Mus_spretus
ENSMAUG00000021618	Tnrc6c	100	84.323	ENSMPUG00000013348	TNRC6C	88	84.841	Mustela_putorius_furo
ENSMAUG00000021618	Tnrc6c	100	81.271	ENSMLUG00000014431	TNRC6C	88	81.443	Myotis_lucifugus
ENSMAUG00000021618	Tnrc6c	100	93.254	ENSNGAG00000012203	Tnrc6c	89	93.254	Nannospalax_galili
ENSMAUG00000021618	Tnrc6c	100	47.579	ENSNBRG00000005344	tnrc6c1	90	51.233	Neolamprologus_brichardi
ENSMAUG00000021618	Tnrc6c	100	85.286	ENSNLEG00000000047	TNRC6C	89	85.228	Nomascus_leucogenys
ENSMAUG00000021618	Tnrc6c	97	77.972	ENSMEUG00000005104	TNRC6C	97	77.791	Notamacropus_eugenii
ENSMAUG00000021618	Tnrc6c	100	89.728	ENSODEG00000012499	TNRC6C	100	90.024	Octodon_degus
ENSMAUG00000021618	Tnrc6c	94	49.879	ENSONIG00000002210	tnrc6c1	96	53.772	Oreochromis_niloticus
ENSMAUG00000021618	Tnrc6c	99	63.876	ENSOANG00000009758	-	84	66.064	Ornithorhynchus_anatinus
ENSMAUG00000021618	Tnrc6c	84	78.452	ENSOCUG00000006122	TNRC6C	83	71.736	Oryctolagus_cuniculus
ENSMAUG00000021618	Tnrc6c	91	49.634	ENSORLG00000009837	tnrc6c1	100	67.658	Oryzias_latipes
ENSMAUG00000021618	Tnrc6c	91	49.082	ENSORLG00020016510	tnrc6c1	100	48.152	Oryzias_latipes_hni
ENSMAUG00000021618	Tnrc6c	72	44.062	ENSORLG00015000171	tnrc6c1	98	43.386	Oryzias_latipes_hsok
ENSMAUG00000021618	Tnrc6c	91	49.482	ENSOMEG00000000357	tnrc6c1	94	48.707	Oryzias_melastigma
ENSMAUG00000021618	Tnrc6c	100	87.248	ENSOGAG00000007197	TNRC6C	100	87.363	Otolemur_garnettii
ENSMAUG00000021618	Tnrc6c	96	81.171	ENSOARG00000006041	TNRC6C	87	81.071	Ovis_aries
ENSMAUG00000021618	Tnrc6c	100	89.334	ENSPPAG00000027160	TNRC6C	100	89.393	Pan_paniscus
ENSMAUG00000021618	Tnrc6c	100	86.890	ENSPPRG00000018881	TNRC6C	100	86.714	Panthera_pardus
ENSMAUG00000021618	Tnrc6c	90	85.153	ENSPTIG00000008791	TNRC6C	69	92.593	Panthera_tigris_altaica
ENSMAUG00000021618	Tnrc6c	100	89.334	ENSPTRG00000009699	TNRC6C	100	89.393	Pan_troglodytes
ENSMAUG00000021618	Tnrc6c	100	89.728	ENSPANG00000019994	TNRC6C	100	89.787	Papio_anubis
ENSMAUG00000021618	Tnrc6c	59	60.886	ENSPKIG00000005428	tnrc6c1	98	50.884	Paramormyrops_kingsleyae
ENSMAUG00000021618	Tnrc6c	100	82.744	ENSPSIG00000018069	TNRC6C	97	82.568	Pelodiscus_sinensis
ENSMAUG00000021618	Tnrc6c	65	55.269	ENSPMGG00000022911	tnrc6c1	97	63.968	Periophthalmus_magnuspinnatus
ENSMAUG00000021618	Tnrc6c	100	96.331	ENSPEMG00000009785	Tnrc6c	100	93.846	Peromyscus_maniculatus_bairdii
ENSMAUG00000021618	Tnrc6c	57	81.462	ENSPCIG00000017421	-	99	81.462	Phascolarctos_cinereus
ENSMAUG00000021618	Tnrc6c	100	49.062	ENSPFOG00000012560	tnrc6c1	97	53.686	Poecilia_formosa
ENSMAUG00000021618	Tnrc6c	97	49.829	ENSPLAG00000021055	tnrc6c1	97	49.858	Poecilia_latipinna
ENSMAUG00000021618	Tnrc6c	100	87.594	ENSPPYG00000008679	TNRC6C	88	87.709	Pongo_abelii
ENSMAUG00000021618	Tnrc6c	93	92.180	ENSPCAG00000012510	TNRC6C	87	92.180	Procavia_capensis
ENSMAUG00000021618	Tnrc6c	100	90.689	ENSPCOG00000021451	TNRC6C	100	90.748	Propithecus_coquereli
ENSMAUG00000021618	Tnrc6c	96	89.831	ENSPVAG00000002008	TNRC6C	93	89.831	Pteropus_vampyrus
ENSMAUG00000021618	Tnrc6c	95	50.034	ENSPNYG00000014477	tnrc6c1	91	49.572	Pundamilia_nyererei
ENSMAUG00000021618	Tnrc6c	100	93.735	ENSRNOG00000022395	Tnrc6c	100	93.913	Rattus_norvegicus
ENSMAUG00000021618	Tnrc6c	100	89.393	ENSRBIG00000027777	TNRC6C	100	89.452	Rhinopithecus_bieti
ENSMAUG00000021618	Tnrc6c	100	89.452	ENSRROG00000042912	TNRC6C	100	89.511	Rhinopithecus_roxellana
ENSMAUG00000021618	Tnrc6c	100	88.072	ENSSBOG00000023981	TNRC6C	100	87.363	Saimiri_boliviensis_boliviensis
ENSMAUG00000021618	Tnrc6c	53	84.335	ENSSHAG00000018330	-	100	84.013	Sarcophilus_harrisii
ENSMAUG00000021618	Tnrc6c	53	55.816	ENSSFOG00015004735	-	99	60.313	Scleropages_formosus
ENSMAUG00000021618	Tnrc6c	79	57.393	ENSSFOG00015006475	tnrc6c1	90	52.803	Scleropages_formosus
ENSMAUG00000021618	Tnrc6c	96	49.855	ENSSMAG00000012761	tnrc6c1	99	50.058	Scophthalmus_maximus
ENSMAUG00000021618	Tnrc6c	94	51.122	ENSSDUG00000002366	tnrc6c1	90	51.789	Seriola_dumerili
ENSMAUG00000021618	Tnrc6c	94	49.530	ENSSLDG00000025613	tnrc6c1	97	49.915	Seriola_lalandi_dorsalis
ENSMAUG00000021618	Tnrc6c	91	88.362	ENSSARG00000006816	TNRC6C	88	88.235	Sorex_araneus
ENSMAUG00000021618	Tnrc6c	82	81.389	ENSSPUG00000007341	TNRC6C	91	81.181	Sphenodon_punctatus
ENSMAUG00000021618	Tnrc6c	78	52.995	ENSSPAG00000014977	tnrc6c1	90	49.857	Stegastes_partitus
ENSMAUG00000021618	Tnrc6c	100	83.481	ENSSSCG00000034373	TNRC6C	100	83.540	Sus_scrofa
ENSMAUG00000021618	Tnrc6c	100	85.580	ENSTGUG00000007733	TNRC6C	97	85.462	Taeniopygia_guttata
ENSMAUG00000021618	Tnrc6c	79	52.421	ENSTRUG00000011685	tnrc6c1	97	48.672	Takifugu_rubripes
ENSMAUG00000021618	Tnrc6c	95	54.709	ENSTNIG00000005273	tnrc6c1	100	59.360	Tetraodon_nigroviridis
ENSMAUG00000021618	Tnrc6c	67	79.633	ENSTBEG00000005046	TNRC6C	99	79.983	Tupaia_belangeri
ENSMAUG00000021618	Tnrc6c	100	87.934	ENSTTRG00000010828	TNRC6C	97	87.934	Tursiops_truncatus
ENSMAUG00000021618	Tnrc6c	100	86.962	ENSUMAG00000013614	TNRC6C	90	86.844	Ursus_maritimus
ENSMAUG00000021618	Tnrc6c	52	78.104	ENSVPAG00000006765	-	99	78.320	Vicugna_pacos
ENSMAUG00000021618	Tnrc6c	100	88.620	ENSVVUG00000015268	TNRC6C	100	88.620	Vulpes_vulpes
ENSMAUG00000021618	Tnrc6c	100	73.672	ENSXETG00000019470	tnrc6c	100	73.684	Xenopus_tropicalis
ENSMAUG00000021618	Tnrc6c	100	50.286	ENSXMAG00000025971	tnrc6c1	97	49.858	Xiphophorus_maculatus