EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000022030 (Gene tree)
Gene ID: 101827665
Gene Symbol: Shq1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 96177 bases
Position: chrKB708153.1:16897856-16994032
Accession: 101827665
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000025523	SHQ1	PF04925.15	5e-70	1	1
ENSMAUP00000025524	SHQ1	PF04925.15	2.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000029545	-	1909	XM_005071212	ENSMAUP00000025523	565 (aa)	XP_005071269	A0A1U7QCY0
ENSMAUT00000029546	-	1365	-	ENSMAUP00000025524	454 (aa)	-	UPI0003596AEE

Gene Model

Click here to download ENSMAUG00000022030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000022030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000022030	Shq1	100	84.836	ENSG00000144736	SHQ1	100	84.821	Homo_sapiens
ENSMAUG00000022030	Shq1	77	60.412	ENSAPOG00000000397	shq1	70	60.641	Acanthochromis_polyacanthus
ENSMAUG00000022030	Shq1	100	87.295	ENSAMEG00000015140	SHQ1	100	76.976	Ailuropoda_melanoleuca
ENSMAUG00000022030	Shq1	77	60.920	ENSACIG00000021249	shq1	71	61.379	Amphilophus_citrinellus
ENSMAUG00000022030	Shq1	79	60.222	ENSAOCG00000023311	shq1	72	60.889	Amphiprion_ocellaris
ENSMAUG00000022030	Shq1	79	60.444	ENSAPEG00000021686	shq1	72	60.667	Amphiprion_percula
ENSMAUG00000022030	Shq1	77	60.870	ENSATEG00000008475	shq1	71	61.327	Anabas_testudineus
ENSMAUG00000022030	Shq1	89	62.622	ENSAPLG00000013926	SHQ1	100	63.922	Anas_platyrhynchos
ENSMAUG00000022030	Shq1	99	64.490	ENSACAG00000014809	SHQ1	85	60.243	Anolis_carolinensis
ENSMAUG00000022030	Shq1	100	82.377	ENSANAG00000029241	SHQ1	100	75.260	Aotus_nancymaae
ENSMAUG00000022030	Shq1	96	59.206	ENSANAG00000030500	-	98	57.473	Aotus_nancymaae
ENSMAUG00000022030	Shq1	78	58.427	ENSACLG00000023077	shq1	74	55.579	Astatotilapia_calliptera
ENSMAUG00000022030	Shq1	76	54.734	ENSAMXG00000043822	shq1	75	54.875	Astyanax_mexicanus
ENSMAUG00000022030	Shq1	100	84.016	ENSBTAG00000005436	SHQ1	100	74.138	Bos_taurus
ENSMAUG00000022030	Shq1	76	32.883	WBGene00021655	Y48A5A.1	97	33.781	Caenorhabditis_elegans
ENSMAUG00000022030	Shq1	100	82.377	ENSCJAG00000015131	SHQ1	100	74.828	Callithrix_jacchus
ENSMAUG00000022030	Shq1	100	86.475	ENSCAFG00000006434	SHQ1	99	76.511	Canis_familiaris
ENSMAUG00000022030	Shq1	100	86.475	ENSCAFG00020016743	SHQ1	99	76.511	Canis_lupus_dingo
ENSMAUG00000022030	Shq1	100	83.607	ENSCHIG00000012271	SHQ1	91	75.000	Capra_hircus
ENSMAUG00000022030	Shq1	99	74.061	ENSTSYG00000014439	SHQ1	99	72.807	Carlito_syrichta
ENSMAUG00000022030	Shq1	90	65.953	ENSCAPG00000009343	SHQ1	96	88.312	Cavia_aperea
ENSMAUG00000022030	Shq1	98	84.426	ENSCPOG00000011443	SHQ1	99	74.828	Cavia_porcellus
ENSMAUG00000022030	Shq1	96	60.357	ENSCCAG00000036087	-	97	58.363	Cebus_capucinus
ENSMAUG00000022030	Shq1	100	65.917	ENSCCAG00000027080	SHQ1	100	66.090	Cebus_capucinus
ENSMAUG00000022030	Shq1	100	83.197	ENSCATG00000041238	SHQ1	100	74.742	Cercocebus_atys
ENSMAUG00000022030	Shq1	98	84.836	ENSCLAG00000004206	SHQ1	99	75.694	Chinchilla_lanigera
ENSMAUG00000022030	Shq1	80	78.065	ENSCSAG00000011514	SHQ1	100	72.008	Chlorocebus_sabaeus
ENSMAUG00000022030	Shq1	52	95.000	ENSCHOG00000003273	-	100	71.884	Choloepus_hoffmanni
ENSMAUG00000022030	Shq1	96	69.362	ENSCPBG00000006441	SHQ1	93	61.538	Chrysemys_picta_bellii
ENSMAUG00000022030	Shq1	68	51.471	ENSCING00000008013	-	95	41.270	Ciona_intestinalis
ENSMAUG00000022030	Shq1	63	62.791	ENSCSAVG00000002332	-	98	41.950	Ciona_savignyi
ENSMAUG00000022030	Shq1	99	83.197	ENSCANG00000039295	SHQ1	100	75.000	Colobus_angolensis_palliatus
ENSMAUG00000022030	Shq1	100	96.721	ENSCGRG00001012583	Shq1	100	96.721	Cricetulus_griseus_chok1gshd
ENSMAUG00000022030	Shq1	100	96.721	ENSCGRG00000009849	Shq1	100	96.721	Cricetulus_griseus_crigri
ENSMAUG00000022030	Shq1	62	67.742	ENSCSEG00000007829	shq1	71	60.579	Cynoglossus_semilaevis
ENSMAUG00000022030	Shq1	77	59.954	ENSCVAG00000020049	shq1	92	52.995	Cyprinodon_variegatus
ENSMAUG00000022030	Shq1	77	59.039	ENSDARG00000058522	shq1	73	58.810	Danio_rerio
ENSMAUG00000022030	Shq1	100	86.066	ENSDNOG00000033937	SHQ1	100	75.390	Dasypus_novemcinctus
ENSMAUG00000022030	Shq1	96	83.663	ENSETEG00000005766	SHQ1	100	64.286	Echinops_telfairi
ENSMAUG00000022030	Shq1	66	49.062	ENSEBUG00000005445	shq1	80	49.861	Eptatretus_burgeri
ENSMAUG00000022030	Shq1	100	86.066	ENSEASG00005002237	SHQ1	100	76.471	Equus_asinus_asinus
ENSMAUG00000022030	Shq1	94	86.475	ENSECAG00000015673	SHQ1	94	77.758	Equus_caballus
ENSMAUG00000022030	Shq1	100	79.918	ENSEEUG00000010568	SHQ1	100	73.183	Erinaceus_europaeus
ENSMAUG00000022030	Shq1	56	78.788	ENSELUG00000003476	shq1	81	58.056	Esox_lucius
ENSMAUG00000022030	Shq1	100	86.885	ENSFCAG00000012781	SHQ1	100	77.913	Felis_catus
ENSMAUG00000022030	Shq1	98	69.672	ENSFALG00000013428	SHQ1	93	60.070	Ficedula_albicollis
ENSMAUG00000022030	Shq1	98	82.787	ENSFDAG00000005595	SHQ1	91	72.250	Fukomys_damarensis
ENSMAUG00000022030	Shq1	77	60.137	ENSFHEG00000017552	shq1	73	59.909	Fundulus_heteroclitus
ENSMAUG00000022030	Shq1	58	73.171	ENSGMOG00000007350	shq1	100	58.942	Gadus_morhua
ENSMAUG00000022030	Shq1	98	70.293	ENSGALG00000007798	SHQ1	93	59.091	Gallus_gallus
ENSMAUG00000022030	Shq1	58	75.610	ENSGACG00000011797	shq1	100	59.950	Gasterosteus_aculeatus
ENSMAUG00000022030	Shq1	100	84.016	ENSGGOG00000034818	SHQ1	100	75.086	Gorilla_gorilla
ENSMAUG00000022030	Shq1	78	58.202	ENSHBUG00000010857	shq1	73	58.969	Haplochromis_burtoni
ENSMAUG00000022030	Shq1	98	84.426	ENSHGLG00000003637	SHQ1	91	73.973	Heterocephalus_glaber_female
ENSMAUG00000022030	Shq1	98	84.426	ENSHGLG00100011957	SHQ1	91	74.227	Heterocephalus_glaber_male
ENSMAUG00000022030	Shq1	77	57.931	ENSHCOG00000010799	shq1	73	59.361	Hippocampus_comes
ENSMAUG00000022030	Shq1	71	66.250	ENSIPUG00000001247	shq1	74	60.181	Ictalurus_punctatus
ENSMAUG00000022030	Shq1	98	82.377	ENSSTOG00000010043	SHQ1	100	74.061	Ictidomys_tridecemlineatus
ENSMAUG00000022030	Shq1	100	86.066	ENSJJAG00000017611	Shq1	100	86.066	Jaculus_jaculus
ENSMAUG00000022030	Shq1	78	60.135	ENSKMAG00000004457	shq1	75	60.491	Kryptolebias_marmoratus
ENSMAUG00000022030	Shq1	98	64.659	ENSLACG00000014243	SHQ1	87	56.477	Latimeria_chalumnae
ENSMAUG00000022030	Shq1	96	55.062	ENSLOCG00000009970	shq1	96	55.476	Lepisosteus_oculatus
ENSMAUG00000022030	Shq1	100	83.607	ENSMFAG00000039148	SHQ1	100	74.742	Macaca_fascicularis
ENSMAUG00000022030	Shq1	99	56.918	ENSMFAG00000037396	-	99	56.370	Macaca_fascicularis
ENSMAUG00000022030	Shq1	89	83.163	ENSMMUG00000009571	SHQ1	96	73.783	Macaca_mulatta
ENSMAUG00000022030	Shq1	99	56.743	ENSMMUG00000021761	-	99	56.195	Macaca_mulatta
ENSMAUG00000022030	Shq1	100	83.607	ENSMNEG00000032667	SHQ1	100	74.742	Macaca_nemestrina
ENSMAUG00000022030	Shq1	100	83.197	ENSMLEG00000038493	SHQ1	100	74.742	Mandrillus_leucophaeus
ENSMAUG00000022030	Shq1	79	59.911	ENSMAMG00000023432	shq1	69	59.341	Mastacembelus_armatus
ENSMAUG00000022030	Shq1	78	58.427	ENSMZEG00005008649	shq1	73	59.193	Maylandia_zebra
ENSMAUG00000022030	Shq1	98	69.167	ENSMGAG00000009640	SHQ1	93	58.172	Meleagris_gallopavo
ENSMAUG00000022030	Shq1	98	84.898	ENSMICG00000009224	SHQ1	99	74.740	Microcebus_murinus
ENSMAUG00000022030	Shq1	100	95.492	ENSMOCG00000017836	Shq1	100	95.492	Microtus_ochrogaster
ENSMAUG00000022030	Shq1	77	59.770	ENSMMOG00000010569	shq1	73	59.770	Mola_mola
ENSMAUG00000022030	Shq1	84	69.665	ENSMODG00000003926	SHQ1	78	73.684	Monodelphis_domestica
ENSMAUG00000022030	Shq1	78	60.722	ENSMALG00000008870	shq1	90	53.680	Monopterus_albus
ENSMAUG00000022030	Shq1	100	93.852	MGP_CAROLIEiJ_G0028689	Shq1	100	93.852	Mus_caroli
ENSMAUG00000022030	Shq1	100	93.852	ENSMUSG00000035378	Shq1	100	93.852	Mus_musculus
ENSMAUG00000022030	Shq1	100	93.033	MGP_PahariEiJ_G0022440	Shq1	100	93.033	Mus_pahari
ENSMAUG00000022030	Shq1	100	93.033	MGP_SPRETEiJ_G0029717	Shq1	100	93.033	Mus_spretus
ENSMAUG00000022030	Shq1	100	84.426	ENSMPUG00000017006	SHQ1	96	77.113	Mustela_putorius_furo
ENSMAUG00000022030	Shq1	90	70.520	ENSMLUG00000013539	SHQ1	98	70.713	Myotis_lucifugus
ENSMAUG00000022030	Shq1	98	74.778	ENSNGAG00000023317	Shq1	99	74.423	Nannospalax_galili
ENSMAUG00000022030	Shq1	62	57.303	ENSNBRG00000024004	shq1	68	58.263	Neolamprologus_brichardi
ENSMAUG00000022030	Shq1	100	85.656	ENSNLEG00000002731	SHQ1	100	76.034	Nomascus_leucogenys
ENSMAUG00000022030	Shq1	74	65.741	ENSMEUG00000009350	-	89	65.741	Notamacropus_eugenii
ENSMAUG00000022030	Shq1	99	71.777	ENSODEG00000009192	SHQ1	98	83.193	Octodon_degus
ENSMAUG00000022030	Shq1	78	58.202	ENSONIG00000020264	shq1	73	58.969	Oreochromis_niloticus
ENSMAUG00000022030	Shq1	99	83.951	ENSOCUG00000016695	SHQ1	99	74.017	Oryctolagus_cuniculus
ENSMAUG00000022030	Shq1	76	59.954	ENSORLG00000023538	shq1	78	60.092	Oryzias_latipes
ENSMAUG00000022030	Shq1	76	59.954	ENSORLG00020003697	shq1	77	60.092	Oryzias_latipes_hni
ENSMAUG00000022030	Shq1	76	59.954	ENSORLG00015021040	shq1	78	60.092	Oryzias_latipes_hsok
ENSMAUG00000022030	Shq1	76	60.417	ENSOMEG00000001225	shq1	79	59.417	Oryzias_melastigma
ENSMAUG00000022030	Shq1	98	84.211	ENSOGAG00000003898	SHQ1	100	74.520	Otolemur_garnettii
ENSMAUG00000022030	Shq1	100	82.520	ENSOARG00000009547	SHQ1	100	73.675	Ovis_aries
ENSMAUG00000022030	Shq1	100	84.836	ENSPPAG00000027714	SHQ1	100	75.258	Pan_paniscus
ENSMAUG00000022030	Shq1	99	58.667	ENSPPAG00000043263	-	99	57.021	Pan_paniscus
ENSMAUG00000022030	Shq1	100	86.885	ENSPPRG00000004769	SHQ1	100	77.586	Panthera_pardus
ENSMAUG00000022030	Shq1	98	79.487	ENSPTIG00000011478	SHQ1	100	73.103	Panthera_tigris_altaica
ENSMAUG00000022030	Shq1	100	84.836	ENSPTRG00000015106	SHQ1	100	75.258	Pan_troglodytes
ENSMAUG00000022030	Shq1	99	57.021	ENSPTRG00000048303	-	99	56.336	Pan_troglodytes
ENSMAUG00000022030	Shq1	100	82.377	ENSPANG00000002881	SHQ1	100	75.258	Papio_anubis
ENSMAUG00000022030	Shq1	70	68.293	ENSPKIG00000021517	shq1	77	56.787	Paramormyrops_kingsleyae
ENSMAUG00000022030	Shq1	97	67.364	ENSPSIG00000005536	SHQ1	93	60.839	Pelodiscus_sinensis
ENSMAUG00000022030	Shq1	72	69.048	ENSPMGG00000008838	shq1	73	59.589	Periophthalmus_magnuspinnatus
ENSMAUG00000022030	Shq1	100	94.672	ENSPEMG00000000251	Shq1	100	94.672	Peromyscus_maniculatus_bairdii
ENSMAUG00000022030	Shq1	78	56.152	ENSPMAG00000005372	shq1	99	56.376	Petromyzon_marinus
ENSMAUG00000022030	Shq1	77	58.542	ENSPFOG00000003118	shq1	79	59.226	Poecilia_formosa
ENSMAUG00000022030	Shq1	61	57.184	ENSPMEG00000011076	shq1	75	58.333	Poecilia_mexicana
ENSMAUG00000022030	Shq1	70	55.147	ENSPREG00000000591	shq1	78	55.340	Poecilia_reticulata
ENSMAUG00000022030	Shq1	100	83.197	ENSPPYG00000013717	SHQ1	100	74.914	Pongo_abelii
ENSMAUG00000022030	Shq1	94	84.016	ENSPCAG00000009035	SHQ1	99	73.415	Procavia_capensis
ENSMAUG00000022030	Shq1	99	83.806	ENSPCOG00000008415	SHQ1	99	75.514	Propithecus_coquereli
ENSMAUG00000022030	Shq1	100	84.016	ENSPVAG00000017392	SHQ1	100	76.471	Pteropus_vampyrus
ENSMAUG00000022030	Shq1	78	58.427	ENSPNYG00000003878	shq1	72	59.193	Pundamilia_nyererei
ENSMAUG00000022030	Shq1	76	59.447	ENSPNAG00000026840	shq1	73	58.278	Pygocentrus_nattereri
ENSMAUG00000022030	Shq1	100	94.262	ENSRNOG00000005433	Shq1	100	84.909	Rattus_norvegicus
ENSMAUG00000022030	Shq1	99	77.600	ENSRBIG00000026280	SHQ1	100	71.057	Rhinopithecus_bieti
ENSMAUG00000022030	Shq1	99	83.197	ENSRROG00000034126	SHQ1	100	74.653	Rhinopithecus_roxellana
ENSMAUG00000022030	Shq1	99	68.048	ENSSBOG00000021038	SHQ1	99	68.048	Saimiri_boliviensis_boliviensis
ENSMAUG00000022030	Shq1	93	72.917	ENSSHAG00000015077	SHQ1	77	74.828	Sarcophilus_harrisii
ENSMAUG00000022030	Shq1	79	62.162	ENSSFOG00015016241	shq1	79	62.162	Scleropages_formosus
ENSMAUG00000022030	Shq1	78	62.077	ENSSMAG00000016151	shq1	72	62.387	Scophthalmus_maximus
ENSMAUG00000022030	Shq1	76	61.894	ENSSDUG00000011986	shq1	72	60.976	Seriola_dumerili
ENSMAUG00000022030	Shq1	73	61.594	ENSSLDG00000013908	shq1	72	60.889	Seriola_lalandi_dorsalis
ENSMAUG00000022030	Shq1	98	66.019	ENSSARG00000007119	SHQ1	98	60.317	Sorex_araneus
ENSMAUG00000022030	Shq1	78	69.079	ENSSPUG00000011526	-	90	58.264	Sphenodon_punctatus
ENSMAUG00000022030	Shq1	98	81.148	ENSSSCG00000011518	SHQ1	99	71.853	Sus_scrofa
ENSMAUG00000022030	Shq1	98	64.103	ENSTGUG00000009933	SHQ1	99	60.000	Taeniopygia_guttata
ENSMAUG00000022030	Shq1	74	67.797	ENSTRUG00000009446	shq1	75	56.858	Takifugu_rubripes
ENSMAUG00000022030	Shq1	73	55.769	ENSTNIG00000007354	shq1	95	55.936	Tetraodon_nigroviridis
ENSMAUG00000022030	Shq1	74	87.234	ENSTBEG00000011295	SHQ1	80	87.234	Tupaia_belangeri
ENSMAUG00000022030	Shq1	96	84.016	ENSTTRG00000005320	SHQ1	98	76.241	Tursiops_truncatus
ENSMAUG00000022030	Shq1	94	86.087	ENSUMAG00000024031	SHQ1	97	75.752	Ursus_maritimus
ENSMAUG00000022030	Shq1	92	63.602	ENSVPAG00000004880	SHQ1	100	64.165	Vicugna_pacos
ENSMAUG00000022030	Shq1	100	86.475	ENSVVUG00000013906	SHQ1	99	76.511	Vulpes_vulpes
ENSMAUG00000022030	Shq1	79	64.143	ENSXETG00000032215	shq1	73	64.143	Xenopus_tropicalis