EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000000671 (Gene tree)
Gene ID: -
Gene Symbol: SNRPF
Alias: Sm-F
Full Name: small nuclear ribonucleoprotein polypeptide F
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Plus strand
Length: 1481 bases
Position: chrGeneScaffold_4986:1206-2686
Accession: 11162
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000000618	LSM	PF01423.22	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000000670	SNRPF-201	258	-	ENSMEUP00000000618	85 (aa)	-	UPI0001B1F1C7

Gene Model

Click here to download ENSMEUG00000000671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000000671's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000000671	SNRPF	87	70.270	ENSG00000139343	SNRPF	63	100.000	Homo_sapiens
ENSMEUG00000000671	SNRPF	87	70.270	ENSAPOG00000003377	snrpf	58	70.270	Acanthochromis_polyacanthus
ENSMEUG00000000671	SNRPF	87	70.270	ENSAMEG00000002166	-	87	70.270	Ailuropoda_melanoleuca
ENSMEUG00000000671	SNRPF	88	60.000	ENSAMEG00000018718	-	86	60.811	Ailuropoda_melanoleuca
ENSMEUG00000000671	SNRPF	86	69.863	ENSACIG00000013216	snrpf	86	69.863	Amphilophus_citrinellus
ENSMEUG00000000671	SNRPF	86	69.863	ENSAOCG00000015108	snrpf	86	69.863	Amphiprion_ocellaris
ENSMEUG00000000671	SNRPF	86	69.863	ENSAPEG00000022022	snrpf	86	69.863	Amphiprion_percula
ENSMEUG00000000671	SNRPF	87	68.919	ENSATEG00000022625	snrpf	80	68.919	Anabas_testudineus
ENSMEUG00000000671	SNRPF	87	70.270	ENSACAG00000014073	SNRPF	85	70.270	Anolis_carolinensis
ENSMEUG00000000671	SNRPF	87	70.270	ENSANAG00000032845	SNRPF	63	100.000	Aotus_nancymaae
ENSMEUG00000000671	SNRPF	84	61.972	ENSANAG00000020297	-	65	61.972	Aotus_nancymaae
ENSMEUG00000000671	SNRPF	86	69.863	ENSACLG00000016066	snrpf	86	69.863	Astatotilapia_calliptera
ENSMEUG00000000671	SNRPF	87	70.270	ENSAMXG00000007421	snrpf	86	70.270	Astyanax_mexicanus
ENSMEUG00000000671	SNRPF	87	70.270	ENSBTAG00000016271	SNRPF	86	70.270	Bos_taurus
ENSMEUG00000000671	SNRPF	91	67.532	ENSBTAG00000050012	-	91	66.216	Bos_taurus
ENSMEUG00000000671	SNRPF	91	53.247	WBGene00004918	snr-5	85	54.167	Caenorhabditis_elegans
ENSMEUG00000000671	SNRPF	87	70.270	ENSCJAG00000002705	-	63	100.000	Callithrix_jacchus
ENSMEUG00000000671	SNRPF	84	63.380	ENSCAFG00000031151	-	85	64.384	Canis_familiaris
ENSMEUG00000000671	SNRPF	87	70.270	ENSCAFG00000006395	-	67	70.270	Canis_familiaris
ENSMEUG00000000671	SNRPF	92	60.256	ENSCAFG00020013161	-	74	65.714	Canis_lupus_dingo
ENSMEUG00000000671	SNRPF	84	63.380	ENSCAFG00020010823	-	85	64.384	Canis_lupus_dingo
ENSMEUG00000000671	SNRPF	87	67.568	ENSTSYG00000036502	-	86	67.568	Carlito_syrichta
ENSMEUG00000000671	SNRPF	87	59.459	ENSTSYG00000030635	-	86	59.459	Carlito_syrichta
ENSMEUG00000000671	SNRPF	95	66.667	ENSTSYG00000031636	-	61	65.753	Carlito_syrichta
ENSMEUG00000000671	SNRPF	87	70.270	ENSCAPG00000007242	SNRPF	87	70.270	Cavia_aperea
ENSMEUG00000000671	SNRPF	87	70.270	ENSCPOG00000013898	SNRPF	86	70.270	Cavia_porcellus
ENSMEUG00000000671	SNRPF	100	72.941	ENSCCAG00000017356	-	86	70.270	Cebus_capucinus
ENSMEUG00000000671	SNRPF	99	66.667	ENSCCAG00000033627	-	57	64.384	Cebus_capucinus
ENSMEUG00000000671	SNRPF	87	70.270	ENSCCAG00000037378	-	63	100.000	Cebus_capucinus
ENSMEUG00000000671	SNRPF	87	70.270	ENSCLAG00000007200	SNRPF	86	70.270	Chinchilla_lanigera
ENSMEUG00000000671	SNRPF	87	70.270	ENSCSAG00000003602	-	60	70.270	Chlorocebus_sabaeus
ENSMEUG00000000671	SNRPF	87	64.865	ENSCPBG00000006227	-	86	64.865	Chrysemys_picta_bellii
ENSMEUG00000000671	SNRPF	100	68.235	ENSCPBG00000024287	-	60	66.216	Chrysemys_picta_bellii
ENSMEUG00000000671	SNRPF	100	64.706	ENSCPBG00000001985	-	88	63.514	Chrysemys_picta_bellii
ENSMEUG00000000671	SNRPF	100	67.059	ENSCPBG00000026463	-	86	64.865	Chrysemys_picta_bellii
ENSMEUG00000000671	SNRPF	100	64.706	ENSCSAVG00000007498	-	84	63.514	Ciona_savignyi
ENSMEUG00000000671	SNRPF	87	70.270	ENSCGRG00001017100	-	86	70.270	Cricetulus_griseus_chok1gshd
ENSMEUG00000000671	SNRPF	86	65.753	ENSCGRG00001008965	-	57	65.753	Cricetulus_griseus_chok1gshd
ENSMEUG00000000671	SNRPF	92	67.949	ENSCGRG00000018878	-	91	65.753	Cricetulus_griseus_crigri
ENSMEUG00000000671	SNRPF	87	70.270	ENSCGRG00000000336	-	86	70.270	Cricetulus_griseus_crigri
ENSMEUG00000000671	SNRPF	87	70.270	ENSCSEG00000004748	snrpf	86	70.270	Cynoglossus_semilaevis
ENSMEUG00000000671	SNRPF	87	70.270	ENSCVAG00000000397	snrpf	59	70.270	Cyprinodon_variegatus
ENSMEUG00000000671	SNRPF	87	68.421	ENSDARG00000105037	snrpf	86	68.421	Danio_rerio
ENSMEUG00000000671	SNRPF	87	68.919	ENSDNOG00000048989	-	66	68.919	Dasypus_novemcinctus
ENSMEUG00000000671	SNRPF	87	58.108	ENSDNOG00000049373	-	64	58.108	Dasypus_novemcinctus
ENSMEUG00000000671	SNRPF	84	61.972	ENSDORG00000025351	-	99	61.972	Dipodomys_ordii
ENSMEUG00000000671	SNRPF	69	61.017	ENSDORG00000029740	-	72	61.017	Dipodomys_ordii
ENSMEUG00000000671	SNRPF	99	59.524	FBgn0000426	SmF	83	60.274	Drosophila_melanogaster
ENSMEUG00000000671	SNRPF	87	70.270	ENSETEG00000001558	-	86	70.270	Echinops_telfairi
ENSMEUG00000000671	SNRPF	87	70.270	ENSECAG00000019817	SNRPF	60	70.270	Equus_caballus
ENSMEUG00000000671	SNRPF	87	70.270	ENSEEUG00000013509	SNRPF	87	70.270	Erinaceus_europaeus
ENSMEUG00000000671	SNRPF	87	68.919	ENSELUG00000003121	RUXF	86	68.919	Esox_lucius
ENSMEUG00000000671	SNRPF	100	69.412	ENSELUG00000007737	RUXF	85	67.568	Esox_lucius
ENSMEUG00000000671	SNRPF	87	70.270	ENSFCAG00000029966	-	64	100.000	Felis_catus
ENSMEUG00000000671	SNRPF	98	62.651	ENSFCAG00000031148	-	68	58.108	Felis_catus
ENSMEUG00000000671	SNRPF	87	70.270	ENSFALG00000010799	SNRPF	86	70.270	Ficedula_albicollis
ENSMEUG00000000671	SNRPF	87	70.270	ENSFDAG00000002831	-	86	70.270	Fukomys_damarensis
ENSMEUG00000000671	SNRPF	87	70.270	ENSFHEG00000003240	snrpf	65	70.270	Fundulus_heteroclitus
ENSMEUG00000000671	SNRPF	87	70.270	ENSGMOG00000007741	snrpf	87	70.270	Gadus_morhua
ENSMEUG00000000671	SNRPF	87	70.270	ENSGALG00000011409	SNRPF	86	70.270	Gallus_gallus
ENSMEUG00000000671	SNRPF	86	69.863	ENSGAFG00000016187	snrpf	84	69.863	Gambusia_affinis
ENSMEUG00000000671	SNRPF	87	70.270	ENSGACG00000020055	snrpf	87	70.270	Gasterosteus_aculeatus
ENSMEUG00000000671	SNRPF	93	64.557	ENSGAGG00000022991	-	80	63.235	Gopherus_agassizii
ENSMEUG00000000671	SNRPF	87	64.865	ENSGAGG00000012945	-	68	66.216	Gopherus_agassizii
ENSMEUG00000000671	SNRPF	71	55.000	ENSGAGG00000011163	-	86	51.020	Gopherus_agassizii
ENSMEUG00000000671	SNRPF	92	56.410	ENSGGOG00000039564	-	89	54.054	Gorilla_gorilla
ENSMEUG00000000671	SNRPF	98	55.422	ENSGGOG00000039936	-	82	50.000	Gorilla_gorilla
ENSMEUG00000000671	SNRPF	87	70.270	ENSGGOG00000001127	-	64	100.000	Gorilla_gorilla
ENSMEUG00000000671	SNRPF	87	70.270	ENSHGLG00000021172	-	86	70.270	Heterocephalus_glaber_female
ENSMEUG00000000671	SNRPF	87	70.270	ENSHGLG00000009108	SNRPF	86	70.270	Heterocephalus_glaber_female
ENSMEUG00000000671	SNRPF	87	70.270	ENSHGLG00100008103	-	87	70.270	Heterocephalus_glaber_male
ENSMEUG00000000671	SNRPF	87	70.270	ENSHGLG00100019596	-	86	70.270	Heterocephalus_glaber_male
ENSMEUG00000000671	SNRPF	87	70.270	ENSIPUG00000018994	snrpf	86	70.270	Ictalurus_punctatus
ENSMEUG00000000671	SNRPF	87	70.270	ENSSTOG00000010434	-	86	70.270	Ictidomys_tridecemlineatus
ENSMEUG00000000671	SNRPF	100	61.176	ENSJJAG00000004558	-	88	59.459	Jaculus_jaculus
ENSMEUG00000000671	SNRPF	87	70.270	ENSJJAG00000011272	-	86	70.270	Jaculus_jaculus
ENSMEUG00000000671	SNRPF	100	60.000	ENSJJAG00000010502	-	88	58.108	Jaculus_jaculus
ENSMEUG00000000671	SNRPF	79	64.179	ENSJJAG00000004828	-	86	60.714	Jaculus_jaculus
ENSMEUG00000000671	SNRPF	86	69.863	ENSKMAG00000013566	snrpf	85	69.863	Kryptolebias_marmoratus
ENSMEUG00000000671	SNRPF	87	70.270	ENSLBEG00000008800	snrpf	86	70.270	Labrus_bergylta
ENSMEUG00000000671	SNRPF	87	70.270	ENSLACG00000002456	-	63	70.270	Latimeria_chalumnae
ENSMEUG00000000671	SNRPF	87	68.919	ENSLOCG00000015744	snrpf	86	68.919	Lepisosteus_oculatus
ENSMEUG00000000671	SNRPF	87	70.270	ENSLAFG00000017426	SNRPF	86	70.270	Loxodonta_africana
ENSMEUG00000000671	SNRPF	86	69.863	ENSMAMG00000016593	snrpf	86	69.863	Mastacembelus_armatus
ENSMEUG00000000671	SNRPF	86	69.863	ENSMZEG00005014701	snrpf	86	69.863	Maylandia_zebra
ENSMEUG00000000671	SNRPF	86	69.863	ENSMGAG00000011453	-	66	69.863	Meleagris_gallopavo
ENSMEUG00000000671	SNRPF	74	65.079	ENSMAUG00000016909	-	85	65.079	Mesocricetus_auratus
ENSMEUG00000000671	SNRPF	98	48.193	ENSMAUG00000010289	-	86	44.444	Mesocricetus_auratus
ENSMEUG00000000671	SNRPF	87	67.568	ENSMAUG00000008799	-	86	67.568	Mesocricetus_auratus
ENSMEUG00000000671	SNRPF	74	65.079	ENSMAUG00000019737	-	85	65.079	Mesocricetus_auratus
ENSMEUG00000000671	SNRPF	87	70.270	ENSMICG00000012153	-	86	70.270	Microcebus_murinus
ENSMEUG00000000671	SNRPF	87	63.514	ENSMICG00000030494	-	59	63.514	Microcebus_murinus
ENSMEUG00000000671	SNRPF	87	59.459	ENSMOCG00000022166	-	81	59.459	Microtus_ochrogaster
ENSMEUG00000000671	SNRPF	80	57.353	ENSMOCG00000020220	-	87	57.353	Microtus_ochrogaster
ENSMEUG00000000671	SNRPF	87	70.270	ENSMOCG00000020437	Snrpf	86	70.270	Microtus_ochrogaster
ENSMEUG00000000671	SNRPF	87	70.270	ENSMMOG00000007127	snrpf	87	70.270	Mola_mola
ENSMEUG00000000671	SNRPF	87	70.270	ENSMODG00000008091	SNRPF	65	70.270	Monodelphis_domestica
ENSMEUG00000000671	SNRPF	86	69.863	ENSMALG00000012328	snrpf	86	69.863	Monopterus_albus
ENSMEUG00000000671	SNRPF	87	70.270	MGP_CAROLIEiJ_G0015735	-	86	70.270	Mus_caroli
ENSMEUG00000000671	SNRPF	87	70.270	ENSMUSG00000020018	Snrpf	86	70.270	Mus_musculus
ENSMEUG00000000671	SNRPF	87	70.270	MGP_PahariEiJ_G0031350	Snrpf	86	70.270	Mus_pahari
ENSMEUG00000000671	SNRPF	87	70.270	MGP_SPRETEiJ_G0016553	Snrpf	86	70.270	Mus_spretus
ENSMEUG00000000671	SNRPF	87	70.270	ENSMPUG00000007176	-	66	70.270	Mustela_putorius_furo
ENSMEUG00000000671	SNRPF	87	70.270	ENSMLUG00000026149	-	70	70.270	Myotis_lucifugus
ENSMEUG00000000671	SNRPF	87	70.270	ENSMLUG00000027932	-	70	70.270	Myotis_lucifugus
ENSMEUG00000000671	SNRPF	100	57.647	ENSMLUG00000026269	-	70	52.703	Myotis_lucifugus
ENSMEUG00000000671	SNRPF	87	70.270	ENSMLUG00000029201	-	70	70.270	Myotis_lucifugus
ENSMEUG00000000671	SNRPF	87	70.270	ENSMLUG00000013577	-	87	70.270	Myotis_lucifugus
ENSMEUG00000000671	SNRPF	74	58.730	ENSNGAG00000005851	-	71	56.667	Nannospalax_galili
ENSMEUG00000000671	SNRPF	87	70.270	ENSNGAG00000024292	-	86	70.270	Nannospalax_galili
ENSMEUG00000000671	SNRPF	87	70.270	ENSNBRG00000011682	snrpf	76	70.270	Neolamprologus_brichardi
ENSMEUG00000000671	SNRPF	87	70.270	ENSODEG00000010328	-	86	70.270	Octodon_degus
ENSMEUG00000000671	SNRPF	87	70.270	ENSOCUG00000010925	SNRPF	65	70.270	Oryctolagus_cuniculus
ENSMEUG00000000671	SNRPF	87	70.270	ENSORLG00020008216	snrpf	87	70.270	Oryzias_latipes_hni
ENSMEUG00000000671	SNRPF	87	70.270	ENSORLG00015007418	snrpf	87	70.270	Oryzias_latipes_hsok
ENSMEUG00000000671	SNRPF	86	69.863	ENSOMEG00000003018	snrpf	86	69.863	Oryzias_melastigma
ENSMEUG00000000671	SNRPF	87	68.919	ENSOGAG00000030323	-	86	68.919	Otolemur_garnettii
ENSMEUG00000000671	SNRPF	87	70.270	ENSOARG00000011853	-	64	70.270	Ovis_aries
ENSMEUG00000000671	SNRPF	98	54.217	ENSPPAG00000037544	-	82	48.649	Pan_paniscus
ENSMEUG00000000671	SNRPF	92	55.128	ENSPPAG00000037479	-	89	52.703	Pan_paniscus
ENSMEUG00000000671	SNRPF	87	70.270	ENSPPRG00000005875	-	64	100.000	Panthera_pardus
ENSMEUG00000000671	SNRPF	98	61.446	ENSPPRG00000007449	-	76	59.459	Panthera_pardus
ENSMEUG00000000671	SNRPF	98	63.855	ENSPTIG00000005117	-	88	59.459	Panthera_tigris_altaica
ENSMEUG00000000671	SNRPF	87	70.270	ENSPTIG00000007520	SNRPF	64	100.000	Panthera_tigris_altaica
ENSMEUG00000000671	SNRPF	98	54.217	ENSPTRG00000043814	-	82	48.649	Pan_troglodytes
ENSMEUG00000000671	SNRPF	92	56.410	ENSPTRG00000047717	-	89	54.054	Pan_troglodytes
ENSMEUG00000000671	SNRPF	87	70.270	ENSPKIG00000014784	snrpf	81	70.270	Paramormyrops_kingsleyae
ENSMEUG00000000671	SNRPF	87	70.270	ENSPSIG00000016462	SNRPF	86	70.270	Pelodiscus_sinensis
ENSMEUG00000000671	SNRPF	87	70.270	ENSPMGG00000023548	snrpf	87	70.270	Periophthalmus_magnuspinnatus
ENSMEUG00000000671	SNRPF	87	70.270	ENSPEMG00000023326	Snrpf	86	70.270	Peromyscus_maniculatus_bairdii
ENSMEUG00000000671	SNRPF	86	69.863	ENSPLAG00000023932	snrpf	86	69.863	Poecilia_latipinna
ENSMEUG00000000671	SNRPF	86	69.863	ENSPMEG00000003377	snrpf	86	69.863	Poecilia_mexicana
ENSMEUG00000000671	SNRPF	86	69.863	ENSPREG00000022635	snrpf	84	69.863	Poecilia_reticulata
ENSMEUG00000000671	SNRPF	87	70.270	ENSPPYG00000004847	-	86	70.270	Pongo_abelii
ENSMEUG00000000671	SNRPF	87	70.270	ENSPCOG00000023833	-	86	70.270	Propithecus_coquereli
ENSMEUG00000000671	SNRPF	87	70.270	ENSPVAG00000009036	SNRPF	86	70.270	Pteropus_vampyrus
ENSMEUG00000000671	SNRPF	86	69.863	ENSPNYG00000021712	snrpf	86	69.863	Pundamilia_nyererei
ENSMEUG00000000671	SNRPF	86	69.863	ENSPNAG00000019117	snrpf	86	69.863	Pygocentrus_nattereri
ENSMEUG00000000671	SNRPF	87	70.270	ENSRNOG00000005556	Snrpf	86	70.270	Rattus_norvegicus
ENSMEUG00000000671	SNRPF	87	68.919	ENSRBIG00000030414	-	86	68.919	Rhinopithecus_bieti
ENSMEUG00000000671	SNRPF	87	68.919	ENSRROG00000021975	-	86	68.919	Rhinopithecus_roxellana
ENSMEUG00000000671	SNRPF	82	45.070	YPR182W	SMX3	83	45.070	Saccharomyces_cerevisiae
ENSMEUG00000000671	SNRPF	87	53.247	ENSSBOG00000027638	-	87	53.247	Saimiri_boliviensis_boliviensis
ENSMEUG00000000671	SNRPF	87	56.757	ENSSBOG00000032297	-	85	56.757	Saimiri_boliviensis_boliviensis
ENSMEUG00000000671	SNRPF	87	70.270	ENSSBOG00000036179	-	62	100.000	Saimiri_boliviensis_boliviensis
ENSMEUG00000000671	SNRPF	87	70.270	ENSSBOG00000012868	-	86	70.270	Saimiri_boliviensis_boliviensis
ENSMEUG00000000671	SNRPF	87	70.270	ENSSHAG00000012294	SNRPF	67	70.270	Sarcophilus_harrisii
ENSMEUG00000000671	SNRPF	87	70.270	ENSSMAG00000005533	snrpf	85	70.270	Scophthalmus_maximus
ENSMEUG00000000671	SNRPF	94	53.750	ENSSLDG00000003885	-	90	55.405	Seriola_lalandi_dorsalis
ENSMEUG00000000671	SNRPF	87	68.919	ENSSLDG00000005119	snrpf	86	68.919	Seriola_lalandi_dorsalis
ENSMEUG00000000671	SNRPF	86	69.863	ENSSPUG00000014590	-	86	69.863	Sphenodon_punctatus
ENSMEUG00000000671	SNRPF	87	70.270	ENSSPAG00000003283	snrpf	84	70.270	Stegastes_partitus
ENSMEUG00000000671	SNRPF	87	70.270	ENSSSCG00000000895	SNRPF	86	70.270	Sus_scrofa
ENSMEUG00000000671	SNRPF	68	62.069	ENSTRUG00000014956	snrpf	84	62.069	Takifugu_rubripes
ENSMEUG00000000671	SNRPF	87	70.270	ENSTNIG00000012672	snrpf	86	70.270	Tetraodon_nigroviridis
ENSMEUG00000000671	SNRPF	87	100.000	ENSTTRG00000006070	SNRPF	86	100.000	Tursiops_truncatus
ENSMEUG00000000671	SNRPF	87	70.270	ENSUAMG00000008176	-	86	70.270	Ursus_americanus
ENSMEUG00000000671	SNRPF	100	64.706	ENSUAMG00000001101	-	87	63.514	Ursus_americanus
ENSMEUG00000000671	SNRPF	87	63.514	ENSUMAG00000006177	-	87	63.514	Ursus_maritimus
ENSMEUG00000000671	SNRPF	87	70.270	ENSUMAG00000003528	-	86	70.270	Ursus_maritimus
ENSMEUG00000000671	SNRPF	87	70.270	ENSVPAG00000008712	-	86	70.270	Vicugna_pacos
ENSMEUG00000000671	SNRPF	91	66.234	ENSVVUG00000023821	-	95	64.865	Vulpes_vulpes
ENSMEUG00000000671	SNRPF	87	68.421	ENSXETG00000021630	snrpf	87	68.421	Xenopus_tropicalis
ENSMEUG00000000671	SNRPF	86	69.863	ENSXCOG00000013860	snrpf	84	69.863	Xiphophorus_couchianus
ENSMEUG00000000671	SNRPF	86	69.863	ENSXMAG00000015448	snrpf	86	69.863	Xiphophorus_maculatus