EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000002246 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 2390 bases
Position: chrGeneScaffold_7965:420-2809
Accession: 17286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000002050	ECR1_N	PF14382.6	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000002249	EXOSC1-201	345	-	ENSMEUP00000002050	115 (aa)	-	UPI0001B1FA8D

Gene Model

Click here to download ENSMEUG00000002246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000002246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000002246	EXOSC1	100	90.435	ENSG00000171311	EXOSC1	83	90.435	Homo_sapiens
ENSMEUG00000002246	EXOSC1	97	72.321	ENSAPOG00000007822	exosc1	58	72.321	Acanthochromis_polyacanthus
ENSMEUG00000002246	EXOSC1	100	90.435	ENSAMEG00000000129	EXOSC1	59	90.435	Ailuropoda_melanoleuca
ENSMEUG00000002246	EXOSC1	97	69.369	ENSACIG00000018956	exosc1	54	69.369	Amphilophus_citrinellus
ENSMEUG00000002246	EXOSC1	97	72.321	ENSAOCG00000010699	exosc1	60	73.000	Amphiprion_ocellaris
ENSMEUG00000002246	EXOSC1	87	69.000	ENSAPEG00000012690	exosc1	59	69.000	Amphiprion_percula
ENSMEUG00000002246	EXOSC1	97	71.429	ENSATEG00000018683	exosc1	58	71.429	Anabas_testudineus
ENSMEUG00000002246	EXOSC1	98	76.106	ENSACAG00000002101	EXOSC1	58	76.106	Anolis_carolinensis
ENSMEUG00000002246	EXOSC1	100	91.304	ENSANAG00000034669	EXOSC1	70	91.304	Aotus_nancymaae
ENSMEUG00000002246	EXOSC1	97	72.321	ENSACLG00000021243	exosc1	58	72.321	Astatotilapia_calliptera
ENSMEUG00000002246	EXOSC1	97	75.000	ENSAMXG00000011116	exosc1	58	75.000	Astyanax_mexicanus
ENSMEUG00000002246	EXOSC1	100	91.304	ENSBTAG00000012699	EXOSC1	59	91.304	Bos_taurus
ENSMEUG00000002246	EXOSC1	100	90.435	ENSCJAG00000016586	EXOSC1	70	90.435	Callithrix_jacchus
ENSMEUG00000002246	EXOSC1	100	91.304	ENSCAFG00000009068	EXOSC1	56	91.304	Canis_familiaris
ENSMEUG00000002246	EXOSC1	100	91.304	ENSCAFG00020006002	EXOSC1	56	91.304	Canis_lupus_dingo
ENSMEUG00000002246	EXOSC1	100	91.304	ENSCHIG00000015253	EXOSC1	59	91.304	Capra_hircus
ENSMEUG00000002246	EXOSC1	100	89.565	ENSTSYG00000000760	EXOSC1	82	89.565	Carlito_syrichta
ENSMEUG00000002246	EXOSC1	100	90.435	ENSCPOG00000001173	EXOSC1	59	90.435	Cavia_porcellus
ENSMEUG00000002246	EXOSC1	100	53.846	ENSCCAG00000023986	EXOSC1	69	53.846	Cebus_capucinus
ENSMEUG00000002246	EXOSC1	100	90.435	ENSCATG00000034114	EXOSC1	83	90.435	Cercocebus_atys
ENSMEUG00000002246	EXOSC1	100	91.304	ENSCLAG00000002463	EXOSC1	59	91.304	Chinchilla_lanigera
ENSMEUG00000002246	EXOSC1	100	90.435	ENSCSAG00000005870	EXOSC1	59	90.435	Chlorocebus_sabaeus
ENSMEUG00000002246	EXOSC1	99	71.053	ENSCHOG00000006477	EXOSC1	61	71.053	Choloepus_hoffmanni
ENSMEUG00000002246	EXOSC1	91	78.095	ENSCPBG00000011949	EXOSC1	87	78.095	Chrysemys_picta_bellii
ENSMEUG00000002246	EXOSC1	94	47.706	ENSCING00000022734	-	52	47.706	Ciona_intestinalis
ENSMEUG00000002246	EXOSC1	94	45.872	ENSCSAVG00000010865	-	56	45.872	Ciona_savignyi
ENSMEUG00000002246	EXOSC1	100	90.435	ENSCANG00000034159	EXOSC1	83	90.435	Colobus_angolensis_palliatus
ENSMEUG00000002246	EXOSC1	100	89.565	ENSCGRG00001000335	Exosc1	59	89.565	Cricetulus_griseus_chok1gshd
ENSMEUG00000002246	EXOSC1	100	89.565	ENSCGRG00000011602	Exosc1	59	89.565	Cricetulus_griseus_crigri
ENSMEUG00000002246	EXOSC1	97	53.571	ENSCSEG00000007895	exosc1	50	53.571	Cynoglossus_semilaevis
ENSMEUG00000002246	EXOSC1	97	70.536	ENSCVAG00000016748	exosc1	63	70.536	Cyprinodon_variegatus
ENSMEUG00000002246	EXOSC1	97	74.107	ENSDARG00000059841	exosc1	58	74.107	Danio_rerio
ENSMEUG00000002246	EXOSC1	100	90.517	ENSDNOG00000007983	EXOSC1	78	90.517	Dasypus_novemcinctus
ENSMEUG00000002246	EXOSC1	100	93.043	ENSDORG00000016528	Exosc1	59	93.043	Dipodomys_ordii
ENSMEUG00000002246	EXOSC1	94	44.545	FBgn0032346	Csl4	53	44.545	Drosophila_melanogaster
ENSMEUG00000002246	EXOSC1	100	87.826	ENSETEG00000002469	-	59	87.826	Echinops_telfairi
ENSMEUG00000002246	EXOSC1	98	49.138	ENSEBUG00000008164	exosc1	59	49.138	Eptatretus_burgeri
ENSMEUG00000002246	EXOSC1	100	75.652	ENSEASG00005008684	EXOSC1	69	75.652	Equus_asinus_asinus
ENSMEUG00000002246	EXOSC1	100	75.652	ENSECAG00000010621	EXOSC1	69	75.652	Equus_caballus
ENSMEUG00000002246	EXOSC1	100	91.304	ENSEEUG00000005647	EXOSC1	59	91.304	Erinaceus_europaeus
ENSMEUG00000002246	EXOSC1	97	72.321	ENSELUG00000017369	exosc1	52	72.321	Esox_lucius
ENSMEUG00000002246	EXOSC1	100	90.435	ENSFCAG00000040563	EXOSC1	82	90.435	Felis_catus
ENSMEUG00000002246	EXOSC1	100	78.261	ENSFALG00000008450	EXOSC1	59	78.261	Ficedula_albicollis
ENSMEUG00000002246	EXOSC1	100	92.174	ENSFDAG00000000846	EXOSC1	59	92.174	Fukomys_damarensis
ENSMEUG00000002246	EXOSC1	97	70.536	ENSFHEG00000009154	exosc1	58	70.536	Fundulus_heteroclitus
ENSMEUG00000002246	EXOSC1	97	73.214	ENSGMOG00000008993	exosc1	58	73.214	Gadus_morhua
ENSMEUG00000002246	EXOSC1	100	60.000	ENSGALG00000039917	EXOSC1	53	60.000	Gallus_gallus
ENSMEUG00000002246	EXOSC1	97	70.536	ENSGAFG00000010265	exosc1	55	70.536	Gambusia_affinis
ENSMEUG00000002246	EXOSC1	97	72.321	ENSGACG00000018936	exosc1	58	72.321	Gasterosteus_aculeatus
ENSMEUG00000002246	EXOSC1	100	78.261	ENSGAGG00000019192	EXOSC1	59	78.261	Gopherus_agassizii
ENSMEUG00000002246	EXOSC1	100	71.304	ENSGGOG00000003099	EXOSC1	79	71.304	Gorilla_gorilla
ENSMEUG00000002246	EXOSC1	97	72.321	ENSHBUG00000017857	exosc1	58	72.321	Haplochromis_burtoni
ENSMEUG00000002246	EXOSC1	100	91.304	ENSHGLG00000016927	EXOSC1	59	91.304	Heterocephalus_glaber_female
ENSMEUG00000002246	EXOSC1	100	91.304	ENSHGLG00100012208	EXOSC1	59	91.304	Heterocephalus_glaber_male
ENSMEUG00000002246	EXOSC1	97	73.214	ENSHCOG00000019882	exosc1	58	73.214	Hippocampus_comes
ENSMEUG00000002246	EXOSC1	97	72.321	ENSIPUG00000007685	exosc1	58	72.321	Ictalurus_punctatus
ENSMEUG00000002246	EXOSC1	100	85.217	ENSSTOG00000029860	-	88	85.217	Ictidomys_tridecemlineatus
ENSMEUG00000002246	EXOSC1	100	92.174	ENSSTOG00000006615	EXOSC1	59	92.174	Ictidomys_tridecemlineatus
ENSMEUG00000002246	EXOSC1	100	90.435	ENSJJAG00000013311	Exosc1	59	90.435	Jaculus_jaculus
ENSMEUG00000002246	EXOSC1	97	71.429	ENSLBEG00000011448	exosc1	58	71.429	Labrus_bergylta
ENSMEUG00000002246	EXOSC1	100	91.304	ENSLAFG00000015983	EXOSC1	59	91.304	Loxodonta_africana
ENSMEUG00000002246	EXOSC1	100	90.435	ENSMFAG00000001493	EXOSC1	83	90.435	Macaca_fascicularis
ENSMEUG00000002246	EXOSC1	100	90.435	ENSMMUG00000020028	EXOSC1	83	90.435	Macaca_mulatta
ENSMEUG00000002246	EXOSC1	100	90.435	ENSMNEG00000029816	EXOSC1	83	90.435	Macaca_nemestrina
ENSMEUG00000002246	EXOSC1	99	80.833	ENSMLEG00000027643	EXOSC1	66	80.833	Mandrillus_leucophaeus
ENSMEUG00000002246	EXOSC1	97	72.321	ENSMAMG00000012200	exosc1	58	72.321	Mastacembelus_armatus
ENSMEUG00000002246	EXOSC1	97	72.321	ENSMZEG00005007042	exosc1	58	72.321	Maylandia_zebra
ENSMEUG00000002246	EXOSC1	100	70.435	ENSMAUG00000020462	-	53	70.435	Mesocricetus_auratus
ENSMEUG00000002246	EXOSC1	100	91.304	ENSMICG00000007664	EXOSC1	65	91.304	Microcebus_murinus
ENSMEUG00000002246	EXOSC1	100	89.565	ENSMOCG00000006004	-	59	89.565	Microtus_ochrogaster
ENSMEUG00000002246	EXOSC1	95	80.000	ENSMOCG00000017124	-	55	80.000	Microtus_ochrogaster
ENSMEUG00000002246	EXOSC1	70	55.000	ENSMMOG00000021403	exosc1	51	55.000	Mola_mola
ENSMEUG00000002246	EXOSC1	100	97.391	ENSMODG00000004213	EXOSC1	59	97.391	Monodelphis_domestica
ENSMEUG00000002246	EXOSC1	97	69.298	ENSMALG00000007061	exosc1	57	69.298	Monopterus_albus
ENSMEUG00000002246	EXOSC1	100	88.696	MGP_CAROLIEiJ_G0022959	Exosc1	59	88.696	Mus_caroli
ENSMEUG00000002246	EXOSC1	100	88.696	ENSMUSG00000034321	Exosc1	59	88.696	Mus_musculus
ENSMEUG00000002246	EXOSC1	100	89.565	MGP_PahariEiJ_G0014449	Exosc1	59	89.565	Mus_pahari
ENSMEUG00000002246	EXOSC1	100	88.696	MGP_SPRETEiJ_G0023880	Exosc1	59	88.696	Mus_spretus
ENSMEUG00000002246	EXOSC1	100	90.435	ENSMPUG00000017044	EXOSC1	59	90.435	Mustela_putorius_furo
ENSMEUG00000002246	EXOSC1	100	89.565	ENSMLUG00000009228	EXOSC1	59	89.565	Myotis_lucifugus
ENSMEUG00000002246	EXOSC1	100	87.826	ENSNGAG00000022033	Exosc1	59	87.826	Nannospalax_galili
ENSMEUG00000002246	EXOSC1	67	59.740	ENSNBRG00000024007	exosc1	50	59.740	Neolamprologus_brichardi
ENSMEUG00000002246	EXOSC1	100	89.565	ENSNLEG00000013872	EXOSC1	83	89.565	Nomascus_leucogenys
ENSMEUG00000002246	EXOSC1	100	89.565	ENSOPRG00000005065	EXOSC1	59	89.565	Ochotona_princeps
ENSMEUG00000002246	EXOSC1	100	92.174	ENSODEG00000016709	EXOSC1	59	92.174	Octodon_degus
ENSMEUG00000002246	EXOSC1	97	72.321	ENSONIG00000017683	exosc1	57	72.321	Oreochromis_niloticus
ENSMEUG00000002246	EXOSC1	100	90.517	ENSOCUG00000011898	-	59	90.517	Oryctolagus_cuniculus
ENSMEUG00000002246	EXOSC1	100	86.957	ENSOCUG00000026461	-	59	86.957	Oryctolagus_cuniculus
ENSMEUG00000002246	EXOSC1	97	72.321	ENSORLG00000011595	exosc1	57	72.321	Oryzias_latipes
ENSMEUG00000002246	EXOSC1	97	72.321	ENSORLG00020005831	exosc1	57	72.321	Oryzias_latipes_hni
ENSMEUG00000002246	EXOSC1	97	72.321	ENSORLG00015004317	exosc1	57	72.321	Oryzias_latipes_hsok
ENSMEUG00000002246	EXOSC1	87	52.000	ENSOMEG00000013907	exosc1	51	52.000	Oryzias_melastigma
ENSMEUG00000002246	EXOSC1	100	92.174	ENSOGAG00000016259	EXOSC1	59	92.174	Otolemur_garnettii
ENSMEUG00000002246	EXOSC1	100	90.435	ENSOARG00000010136	EXOSC1	59	90.435	Ovis_aries
ENSMEUG00000002246	EXOSC1	92	88.679	ENSPPAG00000039842	EXOSC1	54	88.679	Pan_paniscus
ENSMEUG00000002246	EXOSC1	100	90.435	ENSPPRG00000023366	EXOSC1	82	90.435	Panthera_pardus
ENSMEUG00000002246	EXOSC1	100	90.435	ENSPTIG00000017701	EXOSC1	82	90.435	Panthera_tigris_altaica
ENSMEUG00000002246	EXOSC1	100	90.435	ENSPTRG00000002808	EXOSC1	83	90.435	Pan_troglodytes
ENSMEUG00000002246	EXOSC1	100	90.435	ENSPANG00000021324	EXOSC1	83	90.435	Papio_anubis
ENSMEUG00000002246	EXOSC1	97	71.429	ENSPKIG00000016037	exosc1	58	71.429	Paramormyrops_kingsleyae
ENSMEUG00000002246	EXOSC1	97	52.679	ENSPMGG00000014002	exosc1	51	52.679	Periophthalmus_magnuspinnatus
ENSMEUG00000002246	EXOSC1	100	89.565	ENSPEMG00000010710	-	59	89.565	Peromyscus_maniculatus_bairdii
ENSMEUG00000002246	EXOSC1	92	66.355	ENSPMAG00000000195	exosc1	55	66.355	Petromyzon_marinus
ENSMEUG00000002246	EXOSC1	100	99.130	ENSPCIG00000002210	EXOSC1	58	99.130	Phascolarctos_cinereus
ENSMEUG00000002246	EXOSC1	97	68.750	ENSPFOG00000006755	exosc1	55	68.750	Poecilia_formosa
ENSMEUG00000002246	EXOSC1	97	68.750	ENSPLAG00000005880	exosc1	58	68.750	Poecilia_latipinna
ENSMEUG00000002246	EXOSC1	97	68.750	ENSPMEG00000015598	exosc1	55	68.750	Poecilia_mexicana
ENSMEUG00000002246	EXOSC1	100	90.435	ENSPPYG00000002531	EXOSC1	59	90.435	Pongo_abelii
ENSMEUG00000002246	EXOSC1	100	89.565	ENSPCAG00000009135	EXOSC1	59	89.565	Procavia_capensis
ENSMEUG00000002246	EXOSC1	90	90.291	ENSPCOG00000027539	EXOSC1	80	90.291	Propithecus_coquereli
ENSMEUG00000002246	EXOSC1	100	90.435	ENSPVAG00000003372	EXOSC1	59	90.435	Pteropus_vampyrus
ENSMEUG00000002246	EXOSC1	97	72.321	ENSPNYG00000021745	exosc1	58	72.321	Pundamilia_nyererei
ENSMEUG00000002246	EXOSC1	97	73.214	ENSPNAG00000001944	exosc1	58	73.214	Pygocentrus_nattereri
ENSMEUG00000002246	EXOSC1	100	89.565	ENSRNOG00000048708	Exosc1	59	89.565	Rattus_norvegicus
ENSMEUG00000002246	EXOSC1	100	90.435	ENSRBIG00000035618	EXOSC1	83	90.435	Rhinopithecus_bieti
ENSMEUG00000002246	EXOSC1	100	90.435	ENSRROG00000032589	EXOSC1	83	90.435	Rhinopithecus_roxellana
ENSMEUG00000002246	EXOSC1	100	91.304	ENSSBOG00000000359	EXOSC1	70	91.304	Saimiri_boliviensis_boliviensis
ENSMEUG00000002246	EXOSC1	97	70.270	ENSSFOG00015016289	-	57	70.270	Scleropages_formosus
ENSMEUG00000002246	EXOSC1	97	75.000	ENSSFOG00015009069	exosc1	58	75.000	Scleropages_formosus
ENSMEUG00000002246	EXOSC1	97	73.214	ENSSMAG00000003721	exosc1	58	73.214	Scophthalmus_maximus
ENSMEUG00000002246	EXOSC1	97	72.321	ENSSDUG00000002993	exosc1	63	72.321	Seriola_dumerili
ENSMEUG00000002246	EXOSC1	97	72.321	ENSSLDG00000025181	exosc1	63	72.321	Seriola_lalandi_dorsalis
ENSMEUG00000002246	EXOSC1	100	68.696	ENSSARG00000000162	EXOSC1	59	68.696	Sorex_araneus
ENSMEUG00000002246	EXOSC1	100	77.391	ENSSPUG00000012263	EXOSC1	59	77.391	Sphenodon_punctatus
ENSMEUG00000002246	EXOSC1	97	72.321	ENSSPAG00000016792	exosc1	53	72.321	Stegastes_partitus
ENSMEUG00000002246	EXOSC1	100	89.565	ENSSSCG00000010518	EXOSC1	54	89.565	Sus_scrofa
ENSMEUG00000002246	EXOSC1	97	75.000	ENSTGUG00000009692	EXOSC1	58	75.000	Taeniopygia_guttata
ENSMEUG00000002246	EXOSC1	96	68.182	ENSTRUG00000007706	exosc1	59	69.811	Takifugu_rubripes
ENSMEUG00000002246	EXOSC1	96	68.182	ENSTNIG00000014079	exosc1	56	68.182	Tetraodon_nigroviridis
ENSMEUG00000002246	EXOSC1	100	80.000	ENSTBEG00000006011	EXOSC1	59	80.000	Tupaia_belangeri
ENSMEUG00000002246	EXOSC1	90	91.346	ENSTTRG00000009887	EXOSC1	57	91.346	Tursiops_truncatus
ENSMEUG00000002246	EXOSC1	97	72.321	ENSXETG00000003434	exosc1	58	72.321	Xenopus_tropicalis