EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000003272 (Gene tree)
Gene ID: -
Gene Symbol: SF3B4
Alias: Hsh49|SAP49|SF3b49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 4453 bases
Position: chrGeneScaffold_6518:20775-25227
Accession: 10771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000002983	RRM_1	PF00076.22	2.1e-37	1	2
ENSMEUP00000002983	RRM_1	PF00076.22	2.1e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000003278	SF3B4-201	1206	-	ENSMEUP00000002983	402 (aa)	-	UPI0001B21C26

Gene Model

Click here to download ENSMEUG00000003272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000003272's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000003272	SF3B4	82	100.000	ENSG00000143368	SF3B4	81	100.000	Homo_sapiens
ENSMEUG00000003272	SF3B4	82	100.000	ENSAMEG00000010073	SF3B4	81	100.000	Ailuropoda_melanoleuca
ENSMEUG00000003272	SF3B4	82	100.000	ENSACAG00000010019	SF3B4	81	100.000	Anolis_carolinensis
ENSMEUG00000003272	SF3B4	82	100.000	ENSANAG00000031025	SF3B4	81	100.000	Aotus_nancymaae
ENSMEUG00000003272	SF3B4	66	99.065	ENSBTAG00000012793	-	64	99.099	Bos_taurus
ENSMEUG00000003272	SF3B4	82	100.000	ENSBTAG00000012495	SF3B4	81	100.000	Bos_taurus
ENSMEUG00000003272	SF3B4	63	96.988	ENSCJAG00000042351	SF3B4	75	96.988	Callithrix_jacchus
ENSMEUG00000003272	SF3B4	82	100.000	ENSCAFG00000011617	SF3B4	81	100.000	Canis_familiaris
ENSMEUG00000003272	SF3B4	82	100.000	ENSCAFG00020019775	SF3B4	81	100.000	Canis_lupus_dingo
ENSMEUG00000003272	SF3B4	82	100.000	ENSCHIG00000025663	-	81	100.000	Capra_hircus
ENSMEUG00000003272	SF3B4	82	100.000	ENSTSYG00000009295	SF3B4	81	100.000	Carlito_syrichta
ENSMEUG00000003272	SF3B4	63	100.000	ENSCAPG00000006451	SF3B4	62	100.000	Cavia_aperea
ENSMEUG00000003272	SF3B4	82	100.000	ENSCPOG00000008267	SF3B4	81	100.000	Cavia_porcellus
ENSMEUG00000003272	SF3B4	82	99.390	ENSCCAG00000021751	-	82	99.390	Cebus_capucinus
ENSMEUG00000003272	SF3B4	64	90.000	ENSCCAG00000019823	-	54	90.385	Cebus_capucinus
ENSMEUG00000003272	SF3B4	82	100.000	ENSCATG00000033114	SF3B4	81	100.000	Cercocebus_atys
ENSMEUG00000003272	SF3B4	82	100.000	ENSCLAG00000015851	SF3B4	81	100.000	Chinchilla_lanigera
ENSMEUG00000003272	SF3B4	82	100.000	ENSCSAG00000018129	SF3B4	81	100.000	Chlorocebus_sabaeus
ENSMEUG00000003272	SF3B4	82	100.000	ENSCPBG00000008041	SF3B4	81	100.000	Chrysemys_picta_bellii
ENSMEUG00000003272	SF3B4	82	100.000	ENSCANG00000035579	SF3B4	81	100.000	Colobus_angolensis_palliatus
ENSMEUG00000003272	SF3B4	82	100.000	ENSCGRG00001003590	Sf3b4	81	100.000	Cricetulus_griseus_chok1gshd
ENSMEUG00000003272	SF3B4	82	100.000	ENSCGRG00000016914	Sf3b4	81	100.000	Cricetulus_griseus_crigri
ENSMEUG00000003272	SF3B4	78	88.235	ENSDNOG00000037231	-	52	88.235	Dasypus_novemcinctus
ENSMEUG00000003272	SF3B4	80	98.193	ENSDNOG00000048908	-	80	98.193	Dasypus_novemcinctus
ENSMEUG00000003272	SF3B4	82	100.000	ENSDORG00000016366	Sf3b4	81	100.000	Dipodomys_ordii
ENSMEUG00000003272	SF3B4	53	97.917	ENSETEG00000008963	SF3B4	69	86.154	Echinops_telfairi
ENSMEUG00000003272	SF3B4	82	100.000	ENSEASG00005001477	SF3B4	81	100.000	Equus_asinus_asinus
ENSMEUG00000003272	SF3B4	82	100.000	ENSECAG00000024737	SF3B4	81	100.000	Equus_caballus
ENSMEUG00000003272	SF3B4	82	100.000	ENSFCAG00000010106	SF3B4	81	100.000	Felis_catus
ENSMEUG00000003272	SF3B4	82	100.000	ENSFDAG00000009286	SF3B4	81	100.000	Fukomys_damarensis
ENSMEUG00000003272	SF3B4	82	100.000	ENSGALG00000013352	SF3B4	81	100.000	Gallus_gallus
ENSMEUG00000003272	SF3B4	82	100.000	ENSGAGG00000025055	SF3B4	71	100.000	Gopherus_agassizii
ENSMEUG00000003272	SF3B4	82	100.000	ENSGGOG00000004761	SF3B4	81	100.000	Gorilla_gorilla
ENSMEUG00000003272	SF3B4	72	90.244	ENSGGOG00000038845	-	59	90.385	Gorilla_gorilla
ENSMEUG00000003272	SF3B4	82	100.000	ENSHGLG00000012360	SF3B4	81	100.000	Heterocephalus_glaber_female
ENSMEUG00000003272	SF3B4	82	100.000	ENSHGLG00100008533	SF3B4	81	100.000	Heterocephalus_glaber_male
ENSMEUG00000003272	SF3B4	82	100.000	ENSSTOG00000000684	-	81	100.000	Ictidomys_tridecemlineatus
ENSMEUG00000003272	SF3B4	65	97.000	ENSJJAG00000022500	Sf3b4	75	97.000	Jaculus_jaculus
ENSMEUG00000003272	SF3B4	82	100.000	ENSLAFG00000008531	SF3B4	81	100.000	Loxodonta_africana
ENSMEUG00000003272	SF3B4	82	100.000	ENSMFAG00000042395	SF3B4	81	100.000	Macaca_fascicularis
ENSMEUG00000003272	SF3B4	82	100.000	ENSMMUG00000007256	SF3B4	81	100.000	Macaca_mulatta
ENSMEUG00000003272	SF3B4	82	100.000	ENSMNEG00000031839	SF3B4	81	100.000	Macaca_nemestrina
ENSMEUG00000003272	SF3B4	82	100.000	ENSMLEG00000038667	SF3B4	81	100.000	Mandrillus_leucophaeus
ENSMEUG00000003272	SF3B4	82	100.000	ENSMGAG00000000653	SF3B4	81	100.000	Meleagris_gallopavo
ENSMEUG00000003272	SF3B4	82	100.000	ENSMAUG00000015266	Sf3b4	81	100.000	Mesocricetus_auratus
ENSMEUG00000003272	SF3B4	82	100.000	ENSMICG00000044961	SF3B4	81	100.000	Microcebus_murinus
ENSMEUG00000003272	SF3B4	82	100.000	ENSMOCG00000013658	-	81	100.000	Microtus_ochrogaster
ENSMEUG00000003272	SF3B4	68	99.355	ENSMOCG00000014155	-	71	99.355	Microtus_ochrogaster
ENSMEUG00000003272	SF3B4	82	100.000	ENSMODG00000018767	SF3B4	81	100.000	Monodelphis_domestica
ENSMEUG00000003272	SF3B4	82	100.000	MGP_CAROLIEiJ_G0025365	Sf3b4	81	100.000	Mus_caroli
ENSMEUG00000003272	SF3B4	82	100.000	ENSMUSG00000068856	Sf3b4	81	100.000	Mus_musculus
ENSMEUG00000003272	SF3B4	82	100.000	MGP_PahariEiJ_G0026809	Sf3b4	81	100.000	Mus_pahari
ENSMEUG00000003272	SF3B4	82	100.000	MGP_SPRETEiJ_G0026309	Sf3b4	81	100.000	Mus_spretus
ENSMEUG00000003272	SF3B4	82	100.000	ENSMPUG00000005563	SF3B4	81	100.000	Mustela_putorius_furo
ENSMEUG00000003272	SF3B4	82	100.000	ENSMLUG00000010789	SF3B4	81	100.000	Myotis_lucifugus
ENSMEUG00000003272	SF3B4	82	100.000	ENSNGAG00000016337	Sf3b4	81	100.000	Nannospalax_galili
ENSMEUG00000003272	SF3B4	82	97.590	ENSNLEG00000009693	-	90	97.590	Nomascus_leucogenys
ENSMEUG00000003272	SF3B4	68	90.244	ENSNLEG00000000537	-	58	90.244	Nomascus_leucogenys
ENSMEUG00000003272	SF3B4	82	100.000	ENSOPRG00000010808	SF3B4	81	100.000	Ochotona_princeps
ENSMEUG00000003272	SF3B4	71	75.460	ENSODEG00000008916	-	51	91.176	Octodon_degus
ENSMEUG00000003272	SF3B4	51	92.500	ENSODEG00000003597	-	51	93.182	Octodon_degus
ENSMEUG00000003272	SF3B4	82	100.000	ENSOCUG00000004614	SF3B4	81	100.000	Oryctolagus_cuniculus
ENSMEUG00000003272	SF3B4	82	100.000	ENSOGAG00000006265	SF3B4	81	100.000	Otolemur_garnettii
ENSMEUG00000003272	SF3B4	82	100.000	ENSOARG00000020718	-	81	100.000	Ovis_aries
ENSMEUG00000003272	SF3B4	82	100.000	ENSPPAG00000040904	SF3B4	81	100.000	Pan_paniscus
ENSMEUG00000003272	SF3B4	78	89.024	ENSPPAG00000030024	-	56	90.385	Pan_paniscus
ENSMEUG00000003272	SF3B4	82	100.000	ENSPPRG00000007384	SF3B4	81	100.000	Panthera_pardus
ENSMEUG00000003272	SF3B4	82	100.000	ENSPTIG00000014530	SF3B4	81	100.000	Panthera_tigris_altaica
ENSMEUG00000003272	SF3B4	78	89.634	ENSPTRG00000049727	-	51	93.103	Pan_troglodytes
ENSMEUG00000003272	SF3B4	82	100.000	ENSPTRG00000001243	SF3B4	81	100.000	Pan_troglodytes
ENSMEUG00000003272	SF3B4	82	100.000	ENSPANG00000005126	SF3B4	81	100.000	Papio_anubis
ENSMEUG00000003272	SF3B4	82	100.000	ENSPEMG00000017568	Sf3b4	81	100.000	Peromyscus_maniculatus_bairdii
ENSMEUG00000003272	SF3B4	82	100.000	ENSPCIG00000008765	SF3B4	81	100.000	Phascolarctos_cinereus
ENSMEUG00000003272	SF3B4	82	100.000	ENSPCOG00000015399	SF3B4	81	100.000	Propithecus_coquereli
ENSMEUG00000003272	SF3B4	82	100.000	ENSPVAG00000014171	SF3B4	81	100.000	Pteropus_vampyrus
ENSMEUG00000003272	SF3B4	82	100.000	ENSRNOG00000021181	Sf3b4	81	100.000	Rattus_norvegicus
ENSMEUG00000003272	SF3B4	82	100.000	ENSRBIG00000043392	SF3B4	81	100.000	Rhinopithecus_bieti
ENSMEUG00000003272	SF3B4	70	70.968	ENSRROG00000028213	-	61	71.154	Rhinopithecus_roxellana
ENSMEUG00000003272	SF3B4	82	100.000	ENSRROG00000029366	SF3B4	81	100.000	Rhinopithecus_roxellana
ENSMEUG00000003272	SF3B4	82	99.390	ENSSBOG00000012310	-	81	99.390	Saimiri_boliviensis_boliviensis
ENSMEUG00000003272	SF3B4	70	81.707	ENSSBOG00000025174	-	50	91.837	Saimiri_boliviensis_boliviensis
ENSMEUG00000003272	SF3B4	82	99.398	ENSSHAG00000004043	SF3B4	81	99.398	Sarcophilus_harrisii
ENSMEUG00000003272	SF3B4	82	100.000	ENSSSCG00000006665	-	81	100.000	Sus_scrofa
ENSMEUG00000003272	SF3B4	82	100.000	ENSTTRG00000005217	SF3B4	81	100.000	Tursiops_truncatus
ENSMEUG00000003272	SF3B4	82	100.000	ENSUAMG00000022468	SF3B4	81	100.000	Ursus_americanus
ENSMEUG00000003272	SF3B4	82	100.000	ENSUMAG00000003802	SF3B4	81	100.000	Ursus_maritimus
ENSMEUG00000003272	SF3B4	80	100.000	ENSVPAG00000008152	SF3B4	80	100.000	Vicugna_pacos
ENSMEUG00000003272	SF3B4	51	100.000	ENSVVUG00000007732	-	81	100.000	Vulpes_vulpes