EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000003828 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Plus strand
Length: 8375 bases
Position: chrGeneScaffold_4035:10969-19343
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000003491	zf-C2H2	PF00096.26	7.5e-12	1	2
ENSMEUP00000003491	zf-C2H2	PF00096.26	7.5e-12	2	2
ENSMEUP00000003491	zf-met	PF12874.7	3.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000003836	PRDM12-201	1068	-	ENSMEUP00000003491	355 (aa)	-	UPI0001B200F6

Gene Model

Click here to download ENSMEUG00000003828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000003828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000003828	PRDM12	94	84.132	ENSG00000130711	PRDM12	100	80.381	Homo_sapiens
ENSMEUG00000003828	PRDM12	65	98.824	ENSAPOG00000018234	-	82	82.114	Acanthochromis_polyacanthus
ENSMEUG00000003828	PRDM12	99	68.052	ENSAPOG00000016051	prdm12b	100	68.490	Acanthochromis_polyacanthus
ENSMEUG00000003828	PRDM12	76	98.795	ENSAMEG00000016234	PRDM12	82	98.795	Ailuropoda_melanoleuca
ENSMEUG00000003828	PRDM12	99	69.211	ENSACIG00000005193	-	100	69.474	Amphilophus_citrinellus
ENSMEUG00000003828	PRDM12	86	85.789	ENSACIG00000019578	prdm12b	100	70.027	Amphilophus_citrinellus
ENSMEUG00000003828	PRDM12	99	69.211	ENSAOCG00000015040	prdm12b	100	69.657	Amphiprion_ocellaris
ENSMEUG00000003828	PRDM12	99	69.761	ENSAPEG00000015092	prdm12b	100	70.213	Amphiprion_percula
ENSMEUG00000003828	PRDM12	100	66.406	ENSAPEG00000022849	-	100	67.792	Amphiprion_percula
ENSMEUG00000003828	PRDM12	81	91.753	ENSATEG00000014595	-	99	73.684	Anabas_testudineus
ENSMEUG00000003828	PRDM12	96	84.412	ENSANAG00000020616	PRDM12	100	84.412	Aotus_nancymaae
ENSMEUG00000003828	PRDM12	99	66.582	ENSACLG00000007631	-	100	68.101	Astatotilapia_calliptera
ENSMEUG00000003828	PRDM12	99	72.452	ENSACLG00000011876	prdm12b	100	72.452	Astatotilapia_calliptera
ENSMEUG00000003828	PRDM12	99	74.663	ENSAMXG00000033665	prdm12b	100	76.550	Astyanax_mexicanus
ENSMEUG00000003828	PRDM12	99	72.652	ENSAMXG00000008540	PRDM12	100	72.652	Astyanax_mexicanus
ENSMEUG00000003828	PRDM12	94	84.431	ENSBTAG00000023797	PRDM12	100	81.994	Bos_taurus
ENSMEUG00000003828	PRDM12	94	84.431	ENSCJAG00000020540	PRDM12	100	82.222	Callithrix_jacchus
ENSMEUG00000003828	PRDM12	82	82.474	ENSCAFG00000023076	PRDM12	99	79.128	Canis_familiaris
ENSMEUG00000003828	PRDM12	94	84.731	ENSCAFG00020024046	PRDM12	100	81.593	Canis_lupus_dingo
ENSMEUG00000003828	PRDM12	94	84.731	ENSCHIG00000025005	PRDM12	100	82.044	Capra_hircus
ENSMEUG00000003828	PRDM12	88	83.706	ENSCPOG00000005901	PRDM12	95	83.706	Cavia_porcellus
ENSMEUG00000003828	PRDM12	94	84.431	ENSCCAG00000037485	PRDM12	100	81.543	Cebus_capucinus
ENSMEUG00000003828	PRDM12	94	84.431	ENSCATG00000020327	PRDM12	100	81.543	Cercocebus_atys
ENSMEUG00000003828	PRDM12	94	83.832	ENSCLAG00000005499	PRDM12	92	83.832	Chinchilla_lanigera
ENSMEUG00000003828	PRDM12	94	84.431	ENSCSAG00000014756	PRDM12	100	81.319	Chlorocebus_sabaeus
ENSMEUG00000003828	PRDM12	100	85.352	ENSCPBG00000022628	PRDM12	100	85.352	Chrysemys_picta_bellii
ENSMEUG00000003828	PRDM12	94	84.132	ENSCGRG00001015005	Prdm12	100	80.601	Cricetulus_griseus_chok1gshd
ENSMEUG00000003828	PRDM12	99	66.154	ENSCVAG00000000944	-	100	66.923	Cyprinodon_variegatus
ENSMEUG00000003828	PRDM12	86	86.772	ENSCVAG00000017166	prdm12b	100	70.350	Cyprinodon_variegatus
ENSMEUG00000003828	PRDM12	99	77.112	ENSDARG00000007430	prdm12b	100	77.112	Danio_rerio
ENSMEUG00000003828	PRDM12	94	83.832	ENSDNOG00000042302	PRDM12	99	81.717	Dasypus_novemcinctus
ENSMEUG00000003828	PRDM12	87	46.784	ENSEBUG00000016780	prdm12b	75	45.906	Eptatretus_burgeri
ENSMEUG00000003828	PRDM12	96	84.412	ENSEASG00005008472	PRDM12	100	81.768	Equus_asinus_asinus
ENSMEUG00000003828	PRDM12	96	84.118	ENSECAG00000005933	PRDM12	100	81.492	Equus_caballus
ENSMEUG00000003828	PRDM12	99	74.462	ENSELUG00000009905	prdm12b	100	74.462	Esox_lucius
ENSMEUG00000003828	PRDM12	85	86.243	ENSELUG00000013674	PRDM12	99	72.222	Esox_lucius
ENSMEUG00000003828	PRDM12	94	84.731	ENSFCAG00000043086	PRDM12	100	81.818	Felis_catus
ENSMEUG00000003828	PRDM12	100	85.634	ENSFALG00000001445	PRDM12	89	85.634	Ficedula_albicollis
ENSMEUG00000003828	PRDM12	99	68.734	ENSFHEG00000007746	-	100	68.734	Fundulus_heteroclitus
ENSMEUG00000003828	PRDM12	86	85.417	ENSFHEG00000003944	prdm12b	100	70.588	Fundulus_heteroclitus
ENSMEUG00000003828	PRDM12	99	72.676	ENSGMOG00000011797	prdm12b	99	72.958	Gadus_morhua
ENSMEUG00000003828	PRDM12	100	85.634	ENSGALG00000003895	PRDM12	100	85.634	Gallus_gallus
ENSMEUG00000003828	PRDM12	100	69.415	ENSGAFG00000010827	prdm12b	100	71.200	Gambusia_affinis
ENSMEUG00000003828	PRDM12	100	71.774	ENSGACG00000016713	prdm12b	100	71.774	Gasterosteus_aculeatus
ENSMEUG00000003828	PRDM12	100	85.634	ENSGAGG00000014083	PRDM12	100	85.634	Gopherus_agassizii
ENSMEUG00000003828	PRDM12	94	83.832	ENSGGOG00000010568	PRDM12	100	80.328	Gorilla_gorilla
ENSMEUG00000003828	PRDM12	99	71.467	ENSHBUG00000022878	prdm12b	100	71.467	Haplochromis_burtoni
ENSMEUG00000003828	PRDM12	99	66.582	ENSHBUG00000022537	-	93	68.101	Haplochromis_burtoni
ENSMEUG00000003828	PRDM12	94	83.234	ENSHGLG00000013939	PRDM12	100	79.726	Heterocephalus_glaber_female
ENSMEUG00000003828	PRDM12	99	66.942	ENSHCOG00000021167	-	100	66.942	Hippocampus_comes
ENSMEUG00000003828	PRDM12	78	96.552	ENSHCOG00000003663	prdm12b	100	65.903	Hippocampus_comes
ENSMEUG00000003828	PRDM12	99	68.956	ENSIPUG00000019544	PRDM12	100	68.956	Ictalurus_punctatus
ENSMEUG00000003828	PRDM12	99	75.610	ENSIPUG00000017053	prdm12b	100	75.881	Ictalurus_punctatus
ENSMEUG00000003828	PRDM12	95	84.615	ENSSTOG00000005986	PRDM12	88	84.615	Ictidomys_tridecemlineatus
ENSMEUG00000003828	PRDM12	93	84.242	ENSJJAG00000005424	Prdm12	100	84.242	Jaculus_jaculus
ENSMEUG00000003828	PRDM12	86	87.302	ENSKMAG00000016921	prdm12b	100	54.321	Kryptolebias_marmoratus
ENSMEUG00000003828	PRDM12	99	71.508	ENSKMAG00000021205	-	99	71.508	Kryptolebias_marmoratus
ENSMEUG00000003828	PRDM12	85	86.387	ENSLBEG00000007776	-	100	70.079	Labrus_bergylta
ENSMEUG00000003828	PRDM12	99	69.841	ENSLBEG00000017769	prdm12b	100	69.577	Labrus_bergylta
ENSMEUG00000003828	PRDM12	99	83.333	ENSLACG00000017560	PRDM12	99	83.333	Latimeria_chalumnae
ENSMEUG00000003828	PRDM12	99	77.686	ENSLOCG00000005429	prdm12b	99	79.121	Lepisosteus_oculatus
ENSMEUG00000003828	PRDM12	94	83.235	ENSLAFG00000006979	PRDM12	93	83.285	Loxodonta_africana
ENSMEUG00000003828	PRDM12	100	79.019	ENSMFAG00000040322	PRDM12	100	80.654	Macaca_fascicularis
ENSMEUG00000003828	PRDM12	94	84.431	ENSMNEG00000037234	PRDM12	100	81.543	Macaca_nemestrina
ENSMEUG00000003828	PRDM12	99	67.352	ENSMAMG00000018988	-	100	68.638	Mastacembelus_armatus
ENSMEUG00000003828	PRDM12	99	70.479	ENSMAMG00000013212	prdm12b	100	70.400	Mastacembelus_armatus
ENSMEUG00000003828	PRDM12	99	66.247	ENSMZEG00005000415	PRDM12	100	67.758	Maylandia_zebra
ENSMEUG00000003828	PRDM12	98	85.100	ENSMGAG00000005438	PRDM12	99	85.100	Meleagris_gallopavo
ENSMEUG00000003828	PRDM12	100	80.822	ENSMAUG00000013040	Prdm12	100	80.822	Mesocricetus_auratus
ENSMEUG00000003828	PRDM12	96	84.457	ENSMICG00000015480	PRDM12	100	81.768	Microcebus_murinus
ENSMEUG00000003828	PRDM12	98	82.997	ENSMOCG00000021026	Prdm12	93	83.871	Microtus_ochrogaster
ENSMEUG00000003828	PRDM12	100	89.014	ENSMODG00000012108	PRDM12	100	89.014	Monodelphis_domestica
ENSMEUG00000003828	PRDM12	99	60.108	ENSMALG00000021901	prdm12b	99	60.108	Monopterus_albus
ENSMEUG00000003828	PRDM12	94	83.832	MGP_CAROLIEiJ_G0023414	Prdm12	100	80.548	Mus_caroli
ENSMEUG00000003828	PRDM12	94	83.832	ENSMUSG00000079466	Prdm12	100	80.548	Mus_musculus
ENSMEUG00000003828	PRDM12	94	83.832	MGP_PahariEiJ_G0024871	Prdm12	100	80.548	Mus_pahari
ENSMEUG00000003828	PRDM12	94	83.832	MGP_SPRETEiJ_G0024331	Prdm12	100	80.548	Mus_spretus
ENSMEUG00000003828	PRDM12	92	83.792	ENSNGAG00000018480	Prdm12	100	80.563	Nannospalax_galili
ENSMEUG00000003828	PRDM12	86	87.826	ENSNBRG00000024312	-	100	67.945	Neolamprologus_brichardi
ENSMEUG00000003828	PRDM12	99	70.635	ENSNBRG00000006727	prdm12b	100	70.899	Neolamprologus_brichardi
ENSMEUG00000003828	PRDM12	93	83.333	ENSOPRG00000008680	PRDM12	100	83.333	Ochotona_princeps
ENSMEUG00000003828	PRDM12	96	84.164	ENSODEG00000016282	PRDM12	64	84.164	Octodon_degus
ENSMEUG00000003828	PRDM12	61	80.275	ENSOANG00000001043	PRDM12	100	80.275	Ornithorhynchus_anatinus
ENSMEUG00000003828	PRDM12	88	78.594	ENSOCUG00000008241	PRDM12	100	78.594	Oryctolagus_cuniculus
ENSMEUG00000003828	PRDM12	99	65.985	ENSORLG00000017558	-	100	67.263	Oryzias_latipes
ENSMEUG00000003828	PRDM12	100	69.129	ENSORLG00000007114	prdm12b	100	69.129	Oryzias_latipes
ENSMEUG00000003828	PRDM12	99	65.561	ENSORLG00020013167	-	100	67.092	Oryzias_latipes_hni
ENSMEUG00000003828	PRDM12	92	73.099	ENSORLG00020019565	prdm12b	100	68.766	Oryzias_latipes_hni
ENSMEUG00000003828	PRDM12	99	65.985	ENSORLG00015003435	-	100	67.263	Oryzias_latipes_hsok
ENSMEUG00000003828	PRDM12	100	68.865	ENSORLG00015007621	prdm12b	100	68.865	Oryzias_latipes_hsok
ENSMEUG00000003828	PRDM12	86	84.375	ENSOMEG00000004134	prdm12b	100	67.885	Oryzias_melastigma
ENSMEUG00000003828	PRDM12	99	69.577	ENSOMEG00000007762	-	100	69.577	Oryzias_melastigma
ENSMEUG00000003828	PRDM12	94	84.685	ENSOGAG00000007557	PRDM12	100	84.685	Otolemur_garnettii
ENSMEUG00000003828	PRDM12	83	80.546	ENSPPAG00000031506	-	99	80.546	Pan_paniscus
ENSMEUG00000003828	PRDM12	100	82.682	ENSPPRG00000023024	PRDM12	92	82.682	Panthera_pardus
ENSMEUG00000003828	PRDM12	94	84.132	ENSPTRG00000043324	-	100	80.601	Pan_troglodytes
ENSMEUG00000003828	PRDM12	94	84.132	ENSPTRG00000021475	PRDM12	100	80.601	Pan_troglodytes
ENSMEUG00000003828	PRDM12	94	84.431	ENSPANG00000025967	PRDM12	100	81.543	Papio_anubis
ENSMEUG00000003828	PRDM12	99	75.603	ENSPKIG00000007228	prdm12b	100	75.871	Paramormyrops_kingsleyae
ENSMEUG00000003828	PRDM12	83	83.654	ENSPKIG00000004305	PRDM12	99	70.085	Paramormyrops_kingsleyae
ENSMEUG00000003828	PRDM12	100	83.944	ENSPSIG00000006739	PRDM12	100	83.944	Pelodiscus_sinensis
ENSMEUG00000003828	PRDM12	100	68.519	ENSPMGG00000008867	prdm12b	100	70.430	Periophthalmus_magnuspinnatus
ENSMEUG00000003828	PRDM12	99	66.319	ENSPMGG00000002356	-	100	67.188	Periophthalmus_magnuspinnatus
ENSMEUG00000003828	PRDM12	94	84.036	ENSPEMG00000009969	Prdm12	96	80.627	Peromyscus_maniculatus_bairdii
ENSMEUG00000003828	PRDM12	100	89.296	ENSPCIG00000024119	PRDM12	100	89.296	Phascolarctos_cinereus
ENSMEUG00000003828	PRDM12	99	70.889	ENSPFOG00000019841	prdm12b	100	70.889	Poecilia_formosa
ENSMEUG00000003828	PRDM12	92	75.602	ENSPLAG00000016626	prdm12b	100	70.370	Poecilia_latipinna
ENSMEUG00000003828	PRDM12	97	68.293	ENSPMEG00000016698	prdm12b	100	69.565	Poecilia_mexicana
ENSMEUG00000003828	PRDM12	94	68.986	ENSPREG00000003211	-	94	68.986	Poecilia_reticulata
ENSMEUG00000003828	PRDM12	92	75.602	ENSPREG00000015073	prdm12b	100	70.185	Poecilia_reticulata
ENSMEUG00000003828	PRDM12	97	83.140	ENSPPYG00000019694	PRDM12	98	83.140	Pongo_abelii
ENSMEUG00000003828	PRDM12	94	84.731	ENSPCOG00000022255	PRDM12	100	81.421	Propithecus_coquereli
ENSMEUG00000003828	PRDM12	94	84.431	ENSPVAG00000001511	PRDM12	100	81.148	Pteropus_vampyrus
ENSMEUG00000003828	PRDM12	99	66.247	ENSPNYG00000013589	-	100	67.758	Pundamilia_nyererei
ENSMEUG00000003828	PRDM12	99	70.822	ENSPNYG00000009607	prdm12b	100	70.822	Pundamilia_nyererei
ENSMEUG00000003828	PRDM12	99	75.339	ENSPNAG00000024532	prdm12b	100	76.965	Pygocentrus_nattereri
ENSMEUG00000003828	PRDM12	99	68.351	ENSPNAG00000013396	PRDM12	100	70.081	Pygocentrus_nattereri
ENSMEUG00000003828	PRDM12	94	83.832	ENSRNOG00000009218	Prdm12	100	80.548	Rattus_norvegicus
ENSMEUG00000003828	PRDM12	89	84.227	ENSRBIG00000042712	PRDM12	98	77.933	Rhinopithecus_bieti
ENSMEUG00000003828	PRDM12	90	84.424	ENSRROG00000043554	PRDM12	100	84.424	Rhinopithecus_roxellana
ENSMEUG00000003828	PRDM12	100	88.483	ENSSHAG00000015972	PRDM12	100	88.483	Sarcophilus_harrisii
ENSMEUG00000003828	PRDM12	86	86.387	ENSSMAG00000003754	prdm12b	83	86.387	Scophthalmus_maximus
ENSMEUG00000003828	PRDM12	86	85.417	ENSSDUG00000023498	prdm12b	100	56.234	Seriola_dumerili
ENSMEUG00000003828	PRDM12	95	73.469	ENSSDUG00000019071	-	100	70.052	Seriola_dumerili
ENSMEUG00000003828	PRDM12	99	73.950	ENSSLDG00000013562	-	100	73.950	Seriola_lalandi_dorsalis
ENSMEUG00000003828	PRDM12	99	70.079	ENSSLDG00000009557	prdm12b	100	70.079	Seriola_lalandi_dorsalis
ENSMEUG00000003828	PRDM12	100	85.352	ENSSPUG00000013424	PRDM12	100	85.352	Sphenodon_punctatus
ENSMEUG00000003828	PRDM12	99	69.291	ENSSPAG00000018824	prdm12b	100	70.000	Stegastes_partitus
ENSMEUG00000003828	PRDM12	99	68.901	ENSSPAG00000022420	-	100	69.973	Stegastes_partitus
ENSMEUG00000003828	PRDM12	94	84.731	ENSSSCG00000005703	PRDM12	100	81.593	Sus_scrofa
ENSMEUG00000003828	PRDM12	99	70.442	ENSTRUG00000013239	-	100	70.442	Takifugu_rubripes
ENSMEUG00000003828	PRDM12	99	71.698	ENSTRUG00000018659	prdm12b	100	71.892	Takifugu_rubripes
ENSMEUG00000003828	PRDM12	99	71.505	ENSTNIG00000009020	prdm12b	99	71.429	Tetraodon_nigroviridis
ENSMEUG00000003828	PRDM12	99	69.081	ENSTNIG00000005859	-	99	69.081	Tetraodon_nigroviridis
ENSMEUG00000003828	PRDM12	94	84.731	ENSUAMG00000009653	PRDM12	94	84.164	Ursus_americanus
ENSMEUG00000003828	PRDM12	94	84.639	ENSVVUG00000027662	PRDM12	79	84.639	Vulpes_vulpes
ENSMEUG00000003828	PRDM12	100	69.786	ENSXCOG00000002836	prdm12b	100	71.046	Xiphophorus_couchianus
ENSMEUG00000003828	PRDM12	99	67.013	ENSXMAG00000028012	-	100	67.792	Xiphophorus_maculatus
ENSMEUG00000003828	PRDM12	99	69.415	ENSXMAG00000005537	prdm12b	100	70.667	Xiphophorus_maculatus