EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMEUG00000004370 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 5900 bases
Position: chrGeneScaffold_7254:5983-11882
Accession: 25898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000003979	PseudoU_synth_2	PF00849.22	2.3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000004378	RPUSD4-201	1113	-	ENSMEUP00000003979	371 (aa)	-	UPI0001B1F57F

Gene Model

Click here to download ENSMEUG00000004370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000004370's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMEUG00000004370	RPUSD4	52	30.049	ENSMEUG00000016049	RPUSD1	62	30.049
ENSMEUG00000004370	RPUSD4	68	33.212	ENSMEUG00000013098	-	99	33.212

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000004370	RPUSD4	98	69.189	ENSG00000165526	RPUSD4	98	69.189	Homo_sapiens
ENSMEUG00000004370	RPUSD4	87	53.636	ENSAPOG00000011024	rpusd4	82	53.636	Acanthochromis_polyacanthus
ENSMEUG00000004370	RPUSD4	66	67.606	ENSAMEG00000005953	-	97	67.606	Ailuropoda_melanoleuca
ENSMEUG00000004370	RPUSD4	99	69.459	ENSAMEG00000000127	-	98	69.459	Ailuropoda_melanoleuca
ENSMEUG00000004370	RPUSD4	89	49.102	ENSACIG00000003533	rpusd4	97	49.102	Amphilophus_citrinellus
ENSMEUG00000004370	RPUSD4	87	53.495	ENSAOCG00000015409	rpusd4	81	53.495	Amphiprion_ocellaris
ENSMEUG00000004370	RPUSD4	87	53.799	ENSAPEG00000018935	rpusd4	81	53.799	Amphiprion_percula
ENSMEUG00000004370	RPUSD4	85	52.484	ENSATEG00000008059	rpusd4	80	52.484	Anabas_testudineus
ENSMEUG00000004370	RPUSD4	75	64.158	ENSAPLG00000013250	RPUSD4	99	62.712	Anas_platyrhynchos
ENSMEUG00000004370	RPUSD4	89	68.675	ENSACAG00000000189	RPUSD4	91	68.675	Anolis_carolinensis
ENSMEUG00000004370	RPUSD4	99	70.541	ENSANAG00000024050	RPUSD4	99	70.541	Aotus_nancymaae
ENSMEUG00000004370	RPUSD4	87	52.761	ENSACLG00000020996	rpusd4	83	52.761	Astatotilapia_calliptera
ENSMEUG00000004370	RPUSD4	94	50.992	ENSAMXG00000031479	rpusd4	99	50.992	Astyanax_mexicanus
ENSMEUG00000004370	RPUSD4	94	66.952	ENSBTAG00000020900	RPUSD4	93	66.952	Bos_taurus
ENSMEUG00000004370	RPUSD4	98	69.811	ENSCJAG00000042850	RPUSD4	93	69.811	Callithrix_jacchus
ENSMEUG00000004370	RPUSD4	94	72.000	ENSCAFG00000010488	RPUSD4	93	72.000	Canis_familiaris
ENSMEUG00000004370	RPUSD4	94	72.000	ENSCAFG00020010621	RPUSD4	93	72.000	Canis_lupus_dingo
ENSMEUG00000004370	RPUSD4	99	65.323	ENSCHIG00000009975	RPUSD4	98	65.323	Capra_hircus
ENSMEUG00000004370	RPUSD4	99	70.811	ENSTSYG00000008456	RPUSD4	98	70.811	Carlito_syrichta
ENSMEUG00000004370	RPUSD4	68	67.331	ENSCAPG00000006040	RPUSD4	97	67.331	Cavia_aperea
ENSMEUG00000004370	RPUSD4	94	70.605	ENSCPOG00000014971	RPUSD4	92	70.605	Cavia_porcellus
ENSMEUG00000004370	RPUSD4	99	71.892	ENSCCAG00000027838	RPUSD4	99	71.892	Cebus_capucinus
ENSMEUG00000004370	RPUSD4	99	68.919	ENSCATG00000041570	RPUSD4	98	68.919	Cercocebus_atys
ENSMEUG00000004370	RPUSD4	99	70.000	ENSCLAG00000016553	RPUSD4	98	70.000	Chinchilla_lanigera
ENSMEUG00000004370	RPUSD4	98	68.919	ENSCSAG00000002274	RPUSD4	98	68.919	Chlorocebus_sabaeus
ENSMEUG00000004370	RPUSD4	74	75.362	ENSCHOG00000010249	RPUSD4	98	75.362	Choloepus_hoffmanni
ENSMEUG00000004370	RPUSD4	77	70.242	ENSCPBG00000011175	RPUSD4	99	70.242	Chrysemys_picta_bellii
ENSMEUG00000004370	RPUSD4	73	42.446	ENSCSAVG00000000872	-	54	42.446	Ciona_savignyi
ENSMEUG00000004370	RPUSD4	99	68.919	ENSCANG00000039684	RPUSD4	98	68.919	Colobus_angolensis_palliatus
ENSMEUG00000004370	RPUSD4	98	69.505	ENSCGRG00001024141	Rpusd4	97	69.505	Cricetulus_griseus_chok1gshd
ENSMEUG00000004370	RPUSD4	98	69.505	ENSCGRG00000014415	Rpusd4	97	69.505	Cricetulus_griseus_crigri
ENSMEUG00000004370	RPUSD4	52	43.590	ENSCSEG00000006462	-	85	43.590	Cynoglossus_semilaevis
ENSMEUG00000004370	RPUSD4	87	52.744	ENSCVAG00000008761	rpusd4	83	52.744	Cyprinodon_variegatus
ENSMEUG00000004370	RPUSD4	90	51.576	ENSCVAG00000000392	rpusd4	99	51.576	Cyprinodon_variegatus
ENSMEUG00000004370	RPUSD4	87	50.462	ENSDARG00000012674	rpusd4	91	50.462	Danio_rerio
ENSMEUG00000004370	RPUSD4	99	68.919	ENSDNOG00000020026	RPUSD4	98	68.919	Dasypus_novemcinctus
ENSMEUG00000004370	RPUSD4	99	68.649	ENSDORG00000016717	Rpusd4	98	68.649	Dipodomys_ordii
ENSMEUG00000004370	RPUSD4	97	70.556	ENSETEG00000013953	RPUSD4	96	70.556	Echinops_telfairi
ENSMEUG00000004370	RPUSD4	99	69.919	ENSEASG00005022982	RPUSD4	98	69.919	Equus_asinus_asinus
ENSMEUG00000004370	RPUSD4	99	69.648	ENSECAG00000000557	RPUSD4	98	69.648	Equus_caballus
ENSMEUG00000004370	RPUSD4	81	69.022	ENSEEUG00000014036	RPUSD4	80	69.022	Erinaceus_europaeus
ENSMEUG00000004370	RPUSD4	88	54.734	ENSELUG00000008075	rpusd4	88	54.734	Esox_lucius
ENSMEUG00000004370	RPUSD4	99	68.919	ENSFCAG00000029789	RPUSD4	98	68.919	Felis_catus
ENSMEUG00000004370	RPUSD4	89	61.631	ENSFALG00000005171	RPUSD4	96	61.631	Ficedula_albicollis
ENSMEUG00000004370	RPUSD4	94	71.470	ENSFDAG00000014307	RPUSD4	93	71.470	Fukomys_damarensis
ENSMEUG00000004370	RPUSD4	95	49.864	ENSFHEG00000004329	rpusd4	95	49.864	Fundulus_heteroclitus
ENSMEUG00000004370	RPUSD4	87	51.070	ENSGMOG00000017726	rpusd4	96	51.070	Gadus_morhua
ENSMEUG00000004370	RPUSD4	93	57.790	ENSGALG00000024326	RPUSD4	98	58.824	Gallus_gallus
ENSMEUG00000004370	RPUSD4	95	46.933	ENSGAFG00000021559	rpusd4	95	46.933	Gambusia_affinis
ENSMEUG00000004370	RPUSD4	79	52.189	ENSGACG00000001657	rpusd4	99	49.825	Gasterosteus_aculeatus
ENSMEUG00000004370	RPUSD4	94	64.589	ENSGAGG00000000132	RPUSD4	98	64.589	Gopherus_agassizii
ENSMEUG00000004370	RPUSD4	98	69.459	ENSGGOG00000016494	RPUSD4	98	69.459	Gorilla_gorilla
ENSMEUG00000004370	RPUSD4	87	52.761	ENSHBUG00000022838	rpusd4	83	52.761	Haplochromis_burtoni
ENSMEUG00000004370	RPUSD4	99	68.919	ENSHGLG00000002285	RPUSD4	98	68.919	Heterocephalus_glaber_female
ENSMEUG00000004370	RPUSD4	99	68.919	ENSHGLG00100006385	RPUSD4	98	68.919	Heterocephalus_glaber_male
ENSMEUG00000004370	RPUSD4	88	51.515	ENSHCOG00000006612	rpusd4	84	51.515	Hippocampus_comes
ENSMEUG00000004370	RPUSD4	87	54.630	ENSIPUG00000023879	rusd4	84	54.630	Ictalurus_punctatus
ENSMEUG00000004370	RPUSD4	98	70.055	ENSSTOG00000025280	RPUSD4	100	70.055	Ictidomys_tridecemlineatus
ENSMEUG00000004370	RPUSD4	99	69.459	ENSJJAG00000018673	Rpusd4	99	69.459	Jaculus_jaculus
ENSMEUG00000004370	RPUSD4	87	53.354	ENSKMAG00000021805	rpusd4	85	53.354	Kryptolebias_marmoratus
ENSMEUG00000004370	RPUSD4	89	50.742	ENSLBEG00000020394	rpusd4	94	50.742	Labrus_bergylta
ENSMEUG00000004370	RPUSD4	87	64.848	ENSLACG00000011028	RPUSD4	84	64.759	Latimeria_chalumnae
ENSMEUG00000004370	RPUSD4	86	47.368	ENSLOCG00000003124	rpusd4	86	47.368	Lepisosteus_oculatus
ENSMEUG00000004370	RPUSD4	99	71.351	ENSLAFG00000005211	RPUSD4	98	71.351	Loxodonta_africana
ENSMEUG00000004370	RPUSD4	98	69.189	ENSMFAG00000039513	RPUSD4	98	69.189	Macaca_fascicularis
ENSMEUG00000004370	RPUSD4	98	68.919	ENSMMUG00000007933	RPUSD4	98	68.919	Macaca_mulatta
ENSMEUG00000004370	RPUSD4	98	69.189	ENSMNEG00000027414	RPUSD4	98	69.189	Macaca_nemestrina
ENSMEUG00000004370	RPUSD4	98	68.378	ENSMLEG00000042461	RPUSD4	98	68.378	Mandrillus_leucophaeus
ENSMEUG00000004370	RPUSD4	87	51.952	ENSMAMG00000023839	rpusd4	86	51.952	Mastacembelus_armatus
ENSMEUG00000004370	RPUSD4	87	52.761	ENSMZEG00005011999	rpusd4	83	52.761	Maylandia_zebra
ENSMEUG00000004370	RPUSD4	85	60.883	ENSMGAG00000000840	RPUSD4	99	61.371	Meleagris_gallopavo
ENSMEUG00000004370	RPUSD4	93	72.384	ENSMAUG00000010280	Rpusd4	91	72.384	Mesocricetus_auratus
ENSMEUG00000004370	RPUSD4	99	68.919	ENSMICG00000015979	RPUSD4	92	75.329	Microcebus_murinus
ENSMEUG00000004370	RPUSD4	98	67.033	ENSMOCG00000000661	Rpusd4	97	67.033	Microtus_ochrogaster
ENSMEUG00000004370	RPUSD4	84	53.651	ENSMMOG00000021731	rpusd4	93	53.651	Mola_mola
ENSMEUG00000004370	RPUSD4	94	86.167	ENSMODG00000004521	RPUSD4	89	86.167	Monodelphis_domestica
ENSMEUG00000004370	RPUSD4	82	55.161	ENSMALG00000005839	rpusd4	98	53.846	Monopterus_albus
ENSMEUG00000004370	RPUSD4	92	73.235	MGP_CAROLIEiJ_G0031954	Rpusd4	90	73.235	Mus_caroli
ENSMEUG00000004370	RPUSD4	90	73.653	ENSMUSG00000032044	Rpusd4	89	73.653	Mus_musculus
ENSMEUG00000004370	RPUSD4	98	70.055	MGP_PahariEiJ_G0014819	Rpusd4	97	70.055	Mus_pahari
ENSMEUG00000004370	RPUSD4	98	69.505	MGP_SPRETEiJ_G0033078	Rpusd4	97	69.505	Mus_spretus
ENSMEUG00000004370	RPUSD4	99	68.649	ENSMPUG00000006608	RPUSD4	98	68.649	Mustela_putorius_furo
ENSMEUG00000004370	RPUSD4	99	69.648	ENSMLUG00000017328	-	98	69.648	Myotis_lucifugus
ENSMEUG00000004370	RPUSD4	68	73.622	ENSMLUG00000029348	-	100	73.622	Myotis_lucifugus
ENSMEUG00000004370	RPUSD4	92	75.367	ENSNGAG00000020847	Rpusd4	90	75.367	Nannospalax_galili
ENSMEUG00000004370	RPUSD4	87	52.761	ENSNBRG00000005207	rpusd4	94	52.761	Neolamprologus_brichardi
ENSMEUG00000004370	RPUSD4	98	69.189	ENSNLEG00000007465	RPUSD4	98	69.189	Nomascus_leucogenys
ENSMEUG00000004370	RPUSD4	71	51.698	ENSOPRG00000013141	-	100	51.698	Ochotona_princeps
ENSMEUG00000004370	RPUSD4	99	68.108	ENSODEG00000004577	RPUSD4	98	68.108	Octodon_degus
ENSMEUG00000004370	RPUSD4	89	52.522	ENSONIG00000018879	rpusd4	90	52.522	Oreochromis_niloticus
ENSMEUG00000004370	RPUSD4	78	71.186	ENSOANG00000007247	RPUSD4	95	71.044	Ornithorhynchus_anatinus
ENSMEUG00000004370	RPUSD4	93	73.913	ENSOCUG00000017039	RPUSD4	92	73.410	Oryctolagus_cuniculus
ENSMEUG00000004370	RPUSD4	92	49.133	ENSORLG00000002750	rpusd4	94	49.133	Oryzias_latipes
ENSMEUG00000004370	RPUSD4	81	52.131	ENSORLG00020002044	rpusd4	76	52.131	Oryzias_latipes_hni
ENSMEUG00000004370	RPUSD4	81	52.459	ENSORLG00015020034	rpusd4	76	52.459	Oryzias_latipes_hsok
ENSMEUG00000004370	RPUSD4	88	51.940	ENSOMEG00000004861	rpusd4	82	51.940	Oryzias_melastigma
ENSMEUG00000004370	RPUSD4	99	67.647	ENSOGAG00000008922	RPUSD4	96	68.871	Otolemur_garnettii
ENSMEUG00000004370	RPUSD4	96	66.667	ENSOARG00000012238	RPUSD4	94	66.667	Ovis_aries
ENSMEUG00000004370	RPUSD4	98	69.459	ENSPPAG00000042883	RPUSD4	91	69.459	Pan_paniscus
ENSMEUG00000004370	RPUSD4	99	68.649	ENSPPRG00000003081	RPUSD4	98	68.649	Panthera_pardus
ENSMEUG00000004370	RPUSD4	99	68.649	ENSPTIG00000012059	RPUSD4	98	68.649	Panthera_tigris_altaica
ENSMEUG00000004370	RPUSD4	96	70.137	ENSPTRG00000004454	RPUSD4	97	70.137	Pan_troglodytes
ENSMEUG00000004370	RPUSD4	98	68.108	ENSPANG00000015040	RPUSD4	98	68.108	Papio_anubis
ENSMEUG00000004370	RPUSD4	89	57.186	ENSPKIG00000023986	rpusd4	86	57.186	Paramormyrops_kingsleyae
ENSMEUG00000004370	RPUSD4	80	69.000	ENSPSIG00000014268	RPUSD4	95	69.000	Pelodiscus_sinensis
ENSMEUG00000004370	RPUSD4	87	49.394	ENSPMGG00000002806	rpusd4	91	49.240	Periophthalmus_magnuspinnatus
ENSMEUG00000004370	RPUSD4	99	63.514	ENSPEMG00000000278	Rpusd4	98	63.514	Peromyscus_maniculatus_bairdii
ENSMEUG00000004370	RPUSD4	84	42.857	ENSPMAG00000008183	rpusd4	99	42.857	Petromyzon_marinus
ENSMEUG00000004370	RPUSD4	98	91.758	ENSPCIG00000010212	RPUSD4	100	91.758	Phascolarctos_cinereus
ENSMEUG00000004370	RPUSD4	88	51.479	ENSPFOG00000019030	rpusd4	88	51.479	Poecilia_formosa
ENSMEUG00000004370	RPUSD4	88	52.083	ENSPLAG00000016848	rpusd4	85	52.083	Poecilia_latipinna
ENSMEUG00000004370	RPUSD4	88	51.190	ENSPMEG00000017534	rpusd4	85	51.190	Poecilia_mexicana
ENSMEUG00000004370	RPUSD4	82	52.548	ENSPREG00000005689	rpusd4	81	52.548	Poecilia_reticulata
ENSMEUG00000004370	RPUSD4	98	69.189	ENSPPYG00000004043	RPUSD4	98	69.189	Pongo_abelii
ENSMEUG00000004370	RPUSD4	81	67.935	ENSPCAG00000000753	RPUSD4	81	67.935	Procavia_capensis
ENSMEUG00000004370	RPUSD4	94	64.857	ENSPCOG00000020694	RPUSD4	94	64.857	Propithecus_coquereli
ENSMEUG00000004370	RPUSD4	96	71.154	ENSPVAG00000000988	RPUSD4	97	71.154	Pteropus_vampyrus
ENSMEUG00000004370	RPUSD4	87	52.454	ENSPNYG00000009652	rpusd4	83	52.454	Pundamilia_nyererei
ENSMEUG00000004370	RPUSD4	94	52.422	ENSPNAG00000012264	rpusd4	92	52.422	Pygocentrus_nattereri
ENSMEUG00000004370	RPUSD4	98	69.780	ENSRNOG00000011567	Rpusd4	97	69.780	Rattus_norvegicus
ENSMEUG00000004370	RPUSD4	97	70.914	ENSRBIG00000034842	RPUSD4	98	69.189	Rhinopithecus_bieti
ENSMEUG00000004370	RPUSD4	97	70.914	ENSRROG00000039753	RPUSD4	98	69.189	Rhinopithecus_roxellana
ENSMEUG00000004370	RPUSD4	99	72.043	ENSSBOG00000030413	RPUSD4	100	72.043	Saimiri_boliviensis_boliviensis
ENSMEUG00000004370	RPUSD4	81	89.404	ENSSHAG00000008304	RPUSD4	100	89.404	Sarcophilus_harrisii
ENSMEUG00000004370	RPUSD4	81	60.396	ENSSFOG00015006203	rpusd4	88	57.798	Scleropages_formosus
ENSMEUG00000004370	RPUSD4	90	52.493	ENSSMAG00000020978	rpusd4	88	52.493	Scophthalmus_maximus
ENSMEUG00000004370	RPUSD4	84	51.250	ENSSDUG00000013399	rpusd4	84	51.250	Seriola_dumerili
ENSMEUG00000004370	RPUSD4	84	51.250	ENSSLDG00000023507	rpusd4	84	51.250	Seriola_lalandi_dorsalis
ENSMEUG00000004370	RPUSD4	95	63.483	ENSSPUG00000001401	RPUSD4	97	64.045	Sphenodon_punctatus
ENSMEUG00000004370	RPUSD4	87	53.963	ENSSPAG00000012163	rpusd4	84	53.963	Stegastes_partitus
ENSMEUG00000004370	RPUSD4	99	68.649	ENSSSCG00000015233	RPUSD4	94	70.506	Sus_scrofa
ENSMEUG00000004370	RPUSD4	80	64.000	ENSTGUG00000000773	RPUSD4	100	64.000	Taeniopygia_guttata
ENSMEUG00000004370	RPUSD4	88	50.303	ENSTRUG00000012283	rpusd4	84	50.303	Takifugu_rubripes
ENSMEUG00000004370	RPUSD4	86	50.462	ENSTNIG00000014676	rpusd4	82	50.462	Tetraodon_nigroviridis
ENSMEUG00000004370	RPUSD4	99	67.838	ENSTTRG00000001555	RPUSD4	98	67.838	Tursiops_truncatus
ENSMEUG00000004370	RPUSD4	50	70.430	ENSUAMG00000005503	-	97	70.430	Ursus_americanus
ENSMEUG00000004370	RPUSD4	99	69.730	ENSUMAG00000002219	RPUSD4	98	69.730	Ursus_maritimus
ENSMEUG00000004370	RPUSD4	69	70.566	ENSVPAG00000001066	RPUSD4	100	70.566	Vicugna_pacos
ENSMEUG00000004370	RPUSD4	94	71.143	ENSVVUG00000020101	RPUSD4	93	71.143	Vulpes_vulpes
ENSMEUG00000004370	RPUSD4	96	47.757	ENSXCOG00000004676	rpusd4	96	47.757	Xiphophorus_couchianus
ENSMEUG00000004370	RPUSD4	96	47.493	ENSXMAG00000023351	rpusd4	96	47.493	Xiphophorus_maculatus