EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000004495 (Gene tree)
Gene ID: -
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 17401 bases
Position: chrGeneScaffold_2531:4385-21785
Accession: 9348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000004094	zf-C2H2	PF00096.26	6.8e-19	1	3
ENSMEUP00000004094	zf-C2H2	PF00096.26	6.8e-19	2	3
ENSMEUP00000004094	zf-C2H2	PF00096.26	6.8e-19	3	3
ENSMEUP00000004094	zf-met	PF12874.7	8.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000004506	PRDM4-201	2400	-	ENSMEUP00000004094	799 (aa)	-	UPI0001B20230

Gene Model

Click here to download ENSMEUG00000004495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000004495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000004495	PRDM4	89	89.202	ENSG00000110851	PRDM4	95	97.183	Homo_sapiens
ENSMEUG00000004495	PRDM4	89	89.227	ENSAMEG00000016174	PRDM4	89	89.227	Ailuropoda_melanoleuca
ENSMEUG00000004495	PRDM4	89	86.385	ENSAPLG00000009846	PRDM4	89	85.915	Anas_platyrhynchos
ENSMEUG00000004495	PRDM4	89	88.498	ENSANAG00000024800	PRDM4	89	88.498	Aotus_nancymaae
ENSMEUG00000004495	PRDM4	89	90.141	ENSBTAG00000012999	PRDM4	89	90.141	Bos_taurus
ENSMEUG00000004495	PRDM4	89	88.498	ENSCJAG00000015261	PRDM4	89	88.498	Callithrix_jacchus
ENSMEUG00000004495	PRDM4	89	89.671	ENSCAFG00000001788	PRDM4	89	89.671	Canis_familiaris
ENSMEUG00000004495	PRDM4	89	89.671	ENSCAFG00020004916	PRDM4	89	89.671	Canis_lupus_dingo
ENSMEUG00000004495	PRDM4	89	89.906	ENSCHIG00000019409	PRDM4	89	89.906	Capra_hircus
ENSMEUG00000004495	PRDM4	89	88.498	ENSTSYG00000009248	PRDM4	89	88.498	Carlito_syrichta
ENSMEUG00000004495	PRDM4	89	86.215	ENSCAPG00000013937	PRDM4	89	86.682	Cavia_aperea
ENSMEUG00000004495	PRDM4	89	86.215	ENSCPOG00000022385	PRDM4	90	86.682	Cavia_porcellus
ENSMEUG00000004495	PRDM4	89	88.581	ENSCCAG00000036033	PRDM4	89	88.581	Cebus_capucinus
ENSMEUG00000004495	PRDM4	89	89.437	ENSCATG00000044797	PRDM4	89	89.437	Cercocebus_atys
ENSMEUG00000004495	PRDM4	89	86.159	ENSCLAG00000007545	PRDM4	90	86.836	Chinchilla_lanigera
ENSMEUG00000004495	PRDM4	89	89.202	ENSCSAG00000002896	PRDM4	89	89.202	Chlorocebus_sabaeus
ENSMEUG00000004495	PRDM4	60	95.283	ENSCHOG00000001744	PRDM4	67	95.283	Choloepus_hoffmanni
ENSMEUG00000004495	PRDM4	89	86.620	ENSCPBG00000023187	PRDM4	89	86.620	Chrysemys_picta_bellii
ENSMEUG00000004495	PRDM4	89	89.202	ENSCANG00000021804	PRDM4	89	89.202	Colobus_angolensis_palliatus
ENSMEUG00000004495	PRDM4	89	85.813	ENSCGRG00001015102	-	90	85.813	Cricetulus_griseus_chok1gshd
ENSMEUG00000004495	PRDM4	86	85.000	ENSCGRG00000004044	-	89	85.000	Cricetulus_griseus_crigri
ENSMEUG00000004495	PRDM4	89	89.437	ENSDNOG00000032478	PRDM4	87	93.168	Dasypus_novemcinctus
ENSMEUG00000004495	PRDM4	89	74.883	ENSDORG00000015081	-	89	74.883	Dipodomys_ordii
ENSMEUG00000004495	PRDM4	83	52.454	ENSEBUG00000003775	prdm4	89	52.083	Eptatretus_burgeri
ENSMEUG00000004495	PRDM4	89	90.610	ENSECAG00000015423	PRDM4	89	90.610	Equus_caballus
ENSMEUG00000004495	PRDM4	84	84.706	ENSEEUG00000006569	PRDM4	89	84.471	Erinaceus_europaeus
ENSMEUG00000004495	PRDM4	81	65.553	ENSELUG00000015265	prdm4	84	65.553	Esox_lucius
ENSMEUG00000004495	PRDM4	89	90.141	ENSFCAG00000022478	PRDM4	89	90.141	Felis_catus
ENSMEUG00000004495	PRDM4	89	85.915	ENSFALG00000013342	PRDM4	89	85.681	Ficedula_albicollis
ENSMEUG00000004495	PRDM4	89	85.681	ENSGALG00000012619	PRDM4	89	85.211	Gallus_gallus
ENSMEUG00000004495	PRDM4	89	85.681	ENSGAGG00000002763	PRDM4	85	85.681	Gopherus_agassizii
ENSMEUG00000004495	PRDM4	89	89.202	ENSGGOG00000001244	PRDM4	89	89.202	Gorilla_gorilla
ENSMEUG00000004495	PRDM4	89	87.324	ENSHGLG00000004590	PRDM4	88	87.324	Heterocephalus_glaber_female
ENSMEUG00000004495	PRDM4	89	86.851	ENSHGLG00100007464	PRDM4	90	86.851	Heterocephalus_glaber_male
ENSMEUG00000004495	PRDM4	84	65.969	ENSIPUG00000024162	prdm4	83	65.969	Ictalurus_punctatus
ENSMEUG00000004495	PRDM4	89	88.263	ENSSTOG00000016168	PRDM4	89	88.263	Ictidomys_tridecemlineatus
ENSMEUG00000004495	PRDM4	71	85.467	ENSJJAG00000022448	-	83	85.467	Jaculus_jaculus
ENSMEUG00000004495	PRDM4	84	81.606	ENSLACG00000007452	PRDM4	88	77.358	Latimeria_chalumnae
ENSMEUG00000004495	PRDM4	66	52.814	ENSLOCG00000017092	prdm4	81	52.814	Lepisosteus_oculatus
ENSMEUG00000004495	PRDM4	87	90.865	ENSLAFG00000001483	PRDM4	89	90.865	Loxodonta_africana
ENSMEUG00000004495	PRDM4	89	89.202	ENSMFAG00000041862	PRDM4	89	89.202	Macaca_fascicularis
ENSMEUG00000004495	PRDM4	89	89.202	ENSMMUG00000015550	PRDM4	89	89.202	Macaca_mulatta
ENSMEUG00000004495	PRDM4	89	89.202	ENSMNEG00000032319	PRDM4	89	89.202	Macaca_nemestrina
ENSMEUG00000004495	PRDM4	89	88.967	ENSMLEG00000039607	PRDM4	89	88.967	Mandrillus_leucophaeus
ENSMEUG00000004495	PRDM4	89	85.681	ENSMGAG00000012815	PRDM4	90	85.211	Meleagris_gallopavo
ENSMEUG00000004495	PRDM4	89	88.235	ENSMICG00000007807	PRDM4	89	88.235	Microcebus_murinus
ENSMEUG00000004495	PRDM4	89	86.854	ENSMOCG00000000753	Prdm4	89	86.854	Microtus_ochrogaster
ENSMEUG00000004495	PRDM4	89	86.385	ENSMUSG00000035529	Prdm4	89	86.385	Mus_musculus
ENSMEUG00000004495	PRDM4	89	86.150	MGP_PahariEiJ_G0031398	Prdm4	89	86.150	Mus_pahari
ENSMEUG00000004495	PRDM4	89	87.089	MGP_SPRETEiJ_G0016505	Prdm4	89	87.089	Mus_spretus
ENSMEUG00000004495	PRDM4	89	89.227	ENSMPUG00000012238	PRDM4	89	89.227	Mustela_putorius_furo
ENSMEUG00000004495	PRDM4	89	88.732	ENSMLUG00000000767	PRDM4	89	88.732	Myotis_lucifugus
ENSMEUG00000004495	PRDM4	89	88.498	ENSNGAG00000018627	Prdm4	89	88.498	Nannospalax_galili
ENSMEUG00000004495	PRDM4	89	88.967	ENSNLEG00000006748	PRDM4	89	88.967	Nomascus_leucogenys
ENSMEUG00000004495	PRDM4	78	87.240	ENSOPRG00000010192	PRDM4	78	87.240	Ochotona_princeps
ENSMEUG00000004495	PRDM4	89	86.854	ENSODEG00000014750	PRDM4	89	87.324	Octodon_degus
ENSMEUG00000004495	PRDM4	89	90.610	ENSOANG00000005526	PRDM4	89	90.610	Ornithorhynchus_anatinus
ENSMEUG00000004495	PRDM4	83	92.355	ENSOCUG00000012859	PRDM4	85	92.355	Oryctolagus_cuniculus
ENSMEUG00000004495	PRDM4	89	89.437	ENSOGAG00000011945	PRDM4	89	89.437	Otolemur_garnettii
ENSMEUG00000004495	PRDM4	89	90.376	ENSOARG00000017955	PRDM4	89	90.376	Ovis_aries
ENSMEUG00000004495	PRDM4	89	89.202	ENSPPAG00000038438	PRDM4	89	89.202	Pan_paniscus
ENSMEUG00000004495	PRDM4	89	90.141	ENSPPRG00000004144	PRDM4	89	90.141	Panthera_pardus
ENSMEUG00000004495	PRDM4	89	90.141	ENSPTIG00000005847	PRDM4	89	90.141	Panthera_tigris_altaica
ENSMEUG00000004495	PRDM4	89	88.967	ENSPTRG00000005400	PRDM4	89	88.967	Pan_troglodytes
ENSMEUG00000004495	PRDM4	89	89.202	ENSPANG00000022084	PRDM4	89	89.202	Papio_anubis
ENSMEUG00000004495	PRDM4	86	63.697	ENSPKIG00000000875	prdm4	88	63.697	Paramormyrops_kingsleyae
ENSMEUG00000004495	PRDM4	76	90.055	ENSPSIG00000012066	PRDM4	94	90.055	Pelodiscus_sinensis
ENSMEUG00000004495	PRDM4	89	86.854	ENSPEMG00000014598	Prdm4	89	86.854	Peromyscus_maniculatus_bairdii
ENSMEUG00000004495	PRDM4	89	95.550	ENSPCIG00000009471	PRDM4	89	95.550	Phascolarctos_cinereus
ENSMEUG00000004495	PRDM4	89	88.967	ENSPPYG00000004913	PRDM4	89	88.967	Pongo_abelii
ENSMEUG00000004495	PRDM4	73	95.455	ENSPCAG00000009987	PRDM4	72	95.455	Procavia_capensis
ENSMEUG00000004495	PRDM4	89	87.197	ENSPCOG00000021060	PRDM4	89	87.197	Propithecus_coquereli
ENSMEUG00000004495	PRDM4	89	88.235	ENSPVAG00000001596	PRDM4	89	88.235	Pteropus_vampyrus
ENSMEUG00000004495	PRDM4	89	86.183	ENSRNOG00000004962	Prdm4	89	86.885	Rattus_norvegicus
ENSMEUG00000004495	PRDM4	89	89.202	ENSRBIG00000035488	PRDM4	89	89.202	Rhinopithecus_bieti
ENSMEUG00000004495	PRDM4	89	89.202	ENSRROG00000012779	PRDM4	89	89.202	Rhinopithecus_roxellana
ENSMEUG00000004495	PRDM4	89	88.732	ENSSBOG00000000403	PRDM4	89	88.732	Saimiri_boliviensis_boliviensis
ENSMEUG00000004495	PRDM4	86	67.780	ENSSFOG00015023358	prdm4	87	67.780	Scleropages_formosus
ENSMEUG00000004495	PRDM4	89	89.437	ENSSSCG00000000160	PRDM4	89	89.437	Sus_scrofa
ENSMEUG00000004495	PRDM4	89	85.915	ENSTGUG00000010962	-	89	85.681	Taeniopygia_guttata
ENSMEUG00000004495	PRDM4	70	82.418	ENSTBEG00000001732	PRDM4	72	82.418	Tupaia_belangeri
ENSMEUG00000004495	PRDM4	89	90.141	ENSTTRG00000011056	PRDM4	89	90.141	Tursiops_truncatus
ENSMEUG00000004495	PRDM4	89	90.376	ENSUAMG00000022796	PRDM4	89	90.376	Ursus_americanus
ENSMEUG00000004495	PRDM4	89	90.376	ENSUMAG00000017231	PRDM4	89	90.376	Ursus_maritimus
ENSMEUG00000004495	PRDM4	89	89.671	ENSVPAG00000002215	PRDM4	89	89.671	Vicugna_pacos
ENSMEUG00000004495	PRDM4	89	89.671	ENSVVUG00000023397	PRDM4	89	89.671	Vulpes_vulpes