EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000004681 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Plus strand
Length: 43428 bases
Position: chrGeneScaffold_3070:25142-68569
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000004285	EST1	PF10374.9	6.9e-08	1	1
ENSMEUP00000004285	EST1_DNA_bind	PF10373.9	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000004709	SMG7-201	3495	-	ENSMEUP00000004285	1164 (aa)	-	UPI0001B22608

Gene Model

Click here to download ENSMEUG00000004681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000004681's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000004681	SMG7	82	86.750	ENSG00000116698	SMG7	87	85.687	Homo_sapiens
ENSMEUG00000004681	SMG7	54	85.714	ENSAPOG00000009611	smg7	61	85.714	Acanthochromis_polyacanthus
ENSMEUG00000004681	SMG7	73	91.463	ENSAMEG00000002357	SMG7	71	91.463	Ailuropoda_melanoleuca
ENSMEUG00000004681	SMG7	71	60.667	ENSACIG00000015152	smg7	68	60.667	Amphilophus_citrinellus
ENSMEUG00000004681	SMG7	73	65.341	ENSAOCG00000013538	smg7	71	65.341	Amphiprion_ocellaris
ENSMEUG00000004681	SMG7	73	65.341	ENSAPEG00000007851	smg7	71	65.341	Amphiprion_percula
ENSMEUG00000004681	SMG7	73	65.341	ENSATEG00000006931	smg7	70	65.341	Anabas_testudineus
ENSMEUG00000004681	SMG7	73	89.837	ENSAPLG00000015811	SMG7	69	89.837	Anas_platyrhynchos
ENSMEUG00000004681	SMG7	73	86.585	ENSACAG00000014989	SMG7	71	86.585	Anolis_carolinensis
ENSMEUG00000004681	SMG7	73	93.496	ENSANAG00000028114	SMG7	81	86.704	Aotus_nancymaae
ENSMEUG00000004681	SMG7	73	65.341	ENSACLG00000022079	smg7	71	65.341	Astatotilapia_calliptera
ENSMEUG00000004681	SMG7	66	95.789	ENSAMXG00000020809	smg7	64	95.789	Astyanax_mexicanus
ENSMEUG00000004681	SMG7	73	91.463	ENSBTAG00000008003	SMG7	70	91.463	Bos_taurus
ENSMEUG00000004681	SMG7	82	86.611	ENSCJAG00000005135	SMG7	81	86.421	Callithrix_jacchus
ENSMEUG00000004681	SMG7	77	85.356	ENSCAFG00000013276	SMG7	75	85.007	Canis_familiaris
ENSMEUG00000004681	SMG7	73	91.870	ENSCAFG00020015475	SMG7	71	91.870	Canis_lupus_dingo
ENSMEUG00000004681	SMG7	77	85.077	ENSCHIG00000018192	SMG7	77	84.866	Capra_hircus
ENSMEUG00000004681	SMG7	73	93.089	ENSTSYG00000002667	SMG7	71	93.089	Carlito_syrichta
ENSMEUG00000004681	SMG7	77	85.356	ENSCPOG00000008906	SMG7	78	85.007	Cavia_porcellus
ENSMEUG00000004681	SMG7	73	93.089	ENSCCAG00000028596	SMG7	71	93.089	Cebus_capucinus
ENSMEUG00000004681	SMG7	73	92.276	ENSCATG00000011063	SMG7	71	92.276	Cercocebus_atys
ENSMEUG00000004681	SMG7	73	91.057	ENSCLAG00000010751	SMG7	77	85.431	Chinchilla_lanigera
ENSMEUG00000004681	SMG7	77	86.750	ENSCSAG00000012654	SMG7	75	86.563	Chlorocebus_sabaeus
ENSMEUG00000004681	SMG7	72	75.487	ENSCHOG00000010522	SMG7	74	75.000	Choloepus_hoffmanni
ENSMEUG00000004681	SMG7	73	91.870	ENSCPBG00000015724	SMG7	71	91.870	Chrysemys_picta_bellii
ENSMEUG00000004681	SMG7	73	92.276	ENSCANG00000015680	SMG7	71	92.276	Colobus_angolensis_palliatus
ENSMEUG00000004681	SMG7	73	90.650	ENSCGRG00001013705	Smg7	77	85.290	Cricetulus_griseus_chok1gshd
ENSMEUG00000004681	SMG7	73	90.650	ENSCGRG00000018401	Smg7	77	85.290	Cricetulus_griseus_crigri
ENSMEUG00000004681	SMG7	67	100.000	ENSCVAG00000011842	smg7	66	100.000	Cyprinodon_variegatus
ENSMEUG00000004681	SMG7	73	65.341	ENSDARG00000060767	smg7	71	65.341	Danio_rerio
ENSMEUG00000004681	SMG7	77	85.356	ENSDORG00000007331	Smg7	77	85.149	Dipodomys_ordii
ENSMEUG00000004681	SMG7	77	85.216	ENSETEG00000002654	SMG7	80	85.007	Echinops_telfairi
ENSMEUG00000004681	SMG7	77	86.471	ENSEASG00005006524	SMG7	77	86.280	Equus_asinus_asinus
ENSMEUG00000004681	SMG7	73	98.214	ENSECAG00000004313	SMG7	74	96.552	Equus_caballus
ENSMEUG00000004681	SMG7	76	86.072	ENSEEUG00000002024	SMG7	74	85.876	Erinaceus_europaeus
ENSMEUG00000004681	SMG7	77	65.341	ENSELUG00000010293	smg7	75	65.341	Esox_lucius
ENSMEUG00000004681	SMG7	77	85.774	ENSFCAG00000010900	SMG7	77	85.431	Felis_catus
ENSMEUG00000004681	SMG7	72	90.650	ENSFALG00000003047	SMG7	70	90.650	Ficedula_albicollis
ENSMEUG00000004681	SMG7	77	86.053	ENSFDAG00000012121	SMG7	77	85.856	Fukomys_damarensis
ENSMEUG00000004681	SMG7	73	64.773	ENSFHEG00000011073	smg7	70	64.773	Fundulus_heteroclitus
ENSMEUG00000004681	SMG7	69	64.205	ENSGMOG00000004916	smg7	72	64.205	Gadus_morhua
ENSMEUG00000004681	SMG7	73	89.431	ENSGALG00000004667	SMG7	69	89.431	Gallus_gallus
ENSMEUG00000004681	SMG7	68	100.000	ENSGAFG00000019000	smg7	64	100.000	Gambusia_affinis
ENSMEUG00000004681	SMG7	72	100.000	ENSGACG00000001634	smg7	73	100.000	Gasterosteus_aculeatus
ENSMEUG00000004681	SMG7	73	92.276	ENSGGOG00000002342	SMG7	71	92.276	Gorilla_gorilla
ENSMEUG00000004681	SMG7	73	65.341	ENSHBUG00000003726	smg7	72	65.341	Haplochromis_burtoni
ENSMEUG00000004681	SMG7	73	92.683	ENSHGLG00000009353	SMG7	78	86.421	Heterocephalus_glaber_female
ENSMEUG00000004681	SMG7	75	80.286	ENSHGLG00100004878	-	78	80.286	Heterocephalus_glaber_male
ENSMEUG00000004681	SMG7	73	92.276	ENSHGLG00100009637	-	70	92.276	Heterocephalus_glaber_male
ENSMEUG00000004681	SMG7	73	65.992	ENSIPUG00000016997	smg7	71	65.992	Ictalurus_punctatus
ENSMEUG00000004681	SMG7	77	87.029	ENSSTOG00000000401	SMG7	77	86.846	Ictidomys_tridecemlineatus
ENSMEUG00000004681	SMG7	77	85.077	ENSJJAG00000012351	Smg7	77	84.866	Jaculus_jaculus
ENSMEUG00000004681	SMG7	64	98.571	ENSKMAG00000004900	smg7	56	98.571	Kryptolebias_marmoratus
ENSMEUG00000004681	SMG7	73	65.341	ENSLBEG00000002983	smg7	69	65.341	Labrus_bergylta
ENSMEUG00000004681	SMG7	73	71.545	ENSLACG00000000972	SMG7	77	65.909	Latimeria_chalumnae
ENSMEUG00000004681	SMG7	73	65.909	ENSLOCG00000002010	smg7	71	65.909	Lepisosteus_oculatus
ENSMEUG00000004681	SMG7	77	86.053	ENSLAFG00000008186	SMG7	77	85.856	Loxodonta_africana
ENSMEUG00000004681	SMG7	77	86.890	ENSMFAG00000031653	SMG7	77	86.704	Macaca_fascicularis
ENSMEUG00000004681	SMG7	82	86.890	ENSMMUG00000018458	SMG7	81	86.704	Macaca_mulatta
ENSMEUG00000004681	SMG7	73	92.276	ENSMNEG00000034798	SMG7	71	92.276	Macaca_nemestrina
ENSMEUG00000004681	SMG7	73	92.276	ENSMLEG00000037170	SMG7	71	92.276	Mandrillus_leucophaeus
ENSMEUG00000004681	SMG7	73	65.341	ENSMAMG00000018733	smg7	69	65.341	Mastacembelus_armatus
ENSMEUG00000004681	SMG7	73	65.341	ENSMZEG00005015247	smg7	71	65.341	Maylandia_zebra
ENSMEUG00000004681	SMG7	73	89.024	ENSMGAG00000001561	SMG7	70	89.024	Meleagris_gallopavo
ENSMEUG00000004681	SMG7	73	91.463	ENSMAUG00000019484	Smg7	77	85.431	Mesocricetus_auratus
ENSMEUG00000004681	SMG7	73	93.089	ENSMICG00000007145	SMG7	70	93.089	Microcebus_murinus
ENSMEUG00000004681	SMG7	73	91.057	ENSMOCG00000020748	Smg7	77	85.290	Microtus_ochrogaster
ENSMEUG00000004681	SMG7	68	100.000	ENSMMOG00000001524	smg7	63	100.000	Mola_mola
ENSMEUG00000004681	SMG7	73	97.967	ENSMODG00000007139	SMG7	76	97.967	Monodelphis_domestica
ENSMEUG00000004681	SMG7	73	65.341	ENSMALG00000000061	smg7	66	65.341	Monopterus_albus
ENSMEUG00000004681	SMG7	73	92.276	MGP_CAROLIEiJ_G0014704	Smg7	70	92.276	Mus_caroli
ENSMEUG00000004681	SMG7	73	91.870	ENSMUSG00000042772	Smg7	77	85.573	Mus_musculus
ENSMEUG00000004681	SMG7	73	91.463	MGP_PahariEiJ_G0027940	Smg7	77	85.290	Mus_pahari
ENSMEUG00000004681	SMG7	73	91.870	MGP_SPRETEiJ_G0015511	Smg7	77	85.573	Mus_spretus
ENSMEUG00000004681	SMG7	76	85.216	ENSMPUG00000011732	SMG7	75	84.866	Mustela_putorius_furo
ENSMEUG00000004681	SMG7	77	86.611	ENSMLUG00000015417	SMG7	77	86.421	Myotis_lucifugus
ENSMEUG00000004681	SMG7	73	91.870	ENSNGAG00000009836	Smg7	77	85.573	Nannospalax_galili
ENSMEUG00000004681	SMG7	64	100.000	ENSNBRG00000024343	smg7	56	100.000	Neolamprologus_brichardi
ENSMEUG00000004681	SMG7	73	93.089	ENSNLEG00000018018	SMG7	71	93.089	Nomascus_leucogenys
ENSMEUG00000004681	SMG7	77	73.082	ENSOPRG00000013942	SMG7	77	72.277	Ochotona_princeps
ENSMEUG00000004681	SMG7	73	91.870	ENSODEG00000010390	SMG7	77	85.856	Octodon_degus
ENSMEUG00000004681	SMG7	73	65.341	ENSONIG00000000277	smg7	70	65.341	Oreochromis_niloticus
ENSMEUG00000004681	SMG7	76	83.310	ENSOANG00000000994	SMG7	78	83.216	Ornithorhynchus_anatinus
ENSMEUG00000004681	SMG7	77	80.056	ENSOCUG00000005887	SMG7	72	79.915	Oryctolagus_cuniculus
ENSMEUG00000004681	SMG7	73	65.341	ENSORLG00000007314	smg7	70	65.341	Oryzias_latipes
ENSMEUG00000004681	SMG7	73	65.341	ENSORLG00020015779	smg7	70	65.341	Oryzias_latipes_hni
ENSMEUG00000004681	SMG7	77	65.143	ENSORLG00015012289	smg7	74	65.143	Oryzias_latipes_hsok
ENSMEUG00000004681	SMG7	73	65.341	ENSOMEG00000002328	smg7	70	65.341	Oryzias_melastigma
ENSMEUG00000004681	SMG7	82	85.914	ENSOGAG00000003107	SMG7	75	85.856	Otolemur_garnettii
ENSMEUG00000004681	SMG7	77	84.937	ENSOARG00000001352	SMG7	75	84.724	Ovis_aries
ENSMEUG00000004681	SMG7	73	92.683	ENSPPAG00000031619	SMG7	71	92.683	Pan_paniscus
ENSMEUG00000004681	SMG7	73	92.276	ENSPPRG00000011222	SMG7	70	92.276	Panthera_pardus
ENSMEUG00000004681	SMG7	77	85.914	ENSPTIG00000007242	SMG7	71	92.276	Panthera_tigris_altaica
ENSMEUG00000004681	SMG7	82	86.890	ENSPTRG00000001764	SMG7	81	86.704	Pan_troglodytes
ENSMEUG00000004681	SMG7	82	86.890	ENSPANG00000004520	SMG7	81	86.704	Papio_anubis
ENSMEUG00000004681	SMG7	73	63.636	ENSPKIG00000007242	smg7	72	63.636	Paramormyrops_kingsleyae
ENSMEUG00000004681	SMG7	72	91.057	ENSPSIG00000012201	SMG7	70	91.057	Pelodiscus_sinensis
ENSMEUG00000004681	SMG7	77	84.519	ENSPEMG00000011315	Smg7	77	84.300	Peromyscus_maniculatus_bairdii
ENSMEUG00000004681	SMG7	73	98.780	ENSPCIG00000003786	SMG7	72	98.780	Phascolarctos_cinereus
ENSMEUG00000004681	SMG7	73	65.341	ENSPFOG00000019219	smg7	71	65.341	Poecilia_formosa
ENSMEUG00000004681	SMG7	73	65.341	ENSPLAG00000001446	smg7	70	65.341	Poecilia_latipinna
ENSMEUG00000004681	SMG7	73	65.341	ENSPMEG00000005218	smg7	72	65.341	Poecilia_mexicana
ENSMEUG00000004681	SMG7	73	64.773	ENSPREG00000019039	smg7	74	64.773	Poecilia_reticulata
ENSMEUG00000004681	SMG7	73	93.089	ENSPPYG00000000427	SMG7	70	93.089	Pongo_abelii
ENSMEUG00000004681	SMG7	63	100.000	ENSPCAG00000008360	SMG7	63	100.000	Procavia_capensis
ENSMEUG00000004681	SMG7	82	86.890	ENSPCOG00000011996	SMG7	75	85.714	Propithecus_coquereli
ENSMEUG00000004681	SMG7	82	85.237	ENSPVAG00000000851	SMG7	75	85.028	Pteropus_vampyrus
ENSMEUG00000004681	SMG7	73	65.341	ENSPNYG00000007643	smg7	71	65.341	Pundamilia_nyererei
ENSMEUG00000004681	SMG7	73	65.854	ENSPNAG00000011374	smg7	71	65.854	Pygocentrus_nattereri
ENSMEUG00000004681	SMG7	73	91.463	ENSRNOG00000027962	Smg7	87	84.333	Rattus_norvegicus
ENSMEUG00000004681	SMG7	73	92.276	ENSRBIG00000036316	SMG7	71	92.276	Rhinopithecus_bieti
ENSMEUG00000004681	SMG7	73	92.276	ENSRROG00000035719	SMG7	77	86.704	Rhinopithecus_roxellana
ENSMEUG00000004681	SMG7	77	86.611	ENSSBOG00000023454	SMG7	71	93.496	Saimiri_boliviensis_boliviensis
ENSMEUG00000004681	SMG7	73	99.593	ENSSHAG00000013147	SMG7	69	99.593	Sarcophilus_harrisii
ENSMEUG00000004681	SMG7	73	64.205	ENSSFOG00015017252	smg7	71	64.205	Scleropages_formosus
ENSMEUG00000004681	SMG7	73	65.341	ENSSMAG00000006067	smg7	70	65.341	Scophthalmus_maximus
ENSMEUG00000004681	SMG7	69	74.775	ENSSDUG00000017543	smg7	70	65.341	Seriola_dumerili
ENSMEUG00000004681	SMG7	73	86.179	ENSSPUG00000002064	SMG7	69	86.179	Sphenodon_punctatus
ENSMEUG00000004681	SMG7	72	62.963	ENSSPAG00000008733	smg7	68	62.963	Stegastes_partitus
ENSMEUG00000004681	SMG7	77	86.332	ENSSSCG00000015558	SMG7	77	86.139	Sus_scrofa
ENSMEUG00000004681	SMG7	73	90.244	ENSTGUG00000003928	SMG7	70	90.244	Taeniopygia_guttata
ENSMEUG00000004681	SMG7	72	100.000	ENSTNIG00000002802	smg7	72	100.000	Tetraodon_nigroviridis
ENSMEUG00000004681	SMG7	57	100.000	ENSTBEG00000003220	SMG7	56	100.000	Tupaia_belangeri
ENSMEUG00000004681	SMG7	77	86.192	ENSTTRG00000014778	SMG7	75	85.997	Tursiops_truncatus
ENSMEUG00000004681	SMG7	74	78.382	ENSUAMG00000017473	SMG7	76	77.935	Ursus_americanus
ENSMEUG00000004681	SMG7	74	85.077	ENSUMAG00000016389	SMG7	77	84.724	Ursus_maritimus
ENSMEUG00000004681	SMG7	77	85.216	ENSVVUG00000008976	SMG7	77	84.866	Vulpes_vulpes
ENSMEUG00000004681	SMG7	73	64.773	ENSXETG00000012528	smg7	69	64.773	Xenopus_tropicalis
ENSMEUG00000004681	SMG7	73	65.341	ENSXMAG00000007123	smg7	70	65.341	Xiphophorus_maculatus