EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMEUG00000005104 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Plus strand
Length: 69781 bases
Position: chrGeneScaffold_1040:9811-79591
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000004680	Ago_hook	PF10427.9	1e-19	1	1
ENSMEUP00000004680	RRM_1	PF00076.22	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000005131	TNRC6C-201	5085	-	ENSMEUP00000004680	1695 (aa)	-	UPI0001B21DA2

Gene Model

Click here to download ENSMEUG00000005104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000005104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMEUG00000005104	TNRC6C	70	43.911	ENSMEUG00000015959	-	65	43.924

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000005104	TNRC6C	99	89.583	ENSG00000078687	TNRC6C	100	84.211	Homo_sapiens
ENSMEUG00000005104	TNRC6C	71	67.161	ENSAPOG00000019749	tnrc6c1	93	45.922	Acanthochromis_polyacanthus
ENSMEUG00000005104	TNRC6C	99	90.104	ENSAMEG00000013756	TNRC6C	96	77.050	Ailuropoda_melanoleuca
ENSMEUG00000005104	TNRC6C	89	55.667	ENSACIG00000008075	tnrc6c1	91	59.801	Amphilophus_citrinellus
ENSMEUG00000005104	TNRC6C	71	67.532	ENSAOCG00000023968	tnrc6c1	91	71.253	Amphiprion_ocellaris
ENSMEUG00000005104	TNRC6C	71	67.532	ENSAPEG00000009020	tnrc6c1	94	55.250	Amphiprion_percula
ENSMEUG00000005104	TNRC6C	100	79.340	ENSAPLG00000005456	TNRC6C	91	79.738	Anas_platyrhynchos
ENSMEUG00000005104	TNRC6C	100	80.402	ENSACAG00000016198	TNRC6C	89	80.632	Anolis_carolinensis
ENSMEUG00000005104	TNRC6C	99	90.104	ENSANAG00000021554	TNRC6C	97	81.565	Aotus_nancymaae
ENSMEUG00000005104	TNRC6C	98	43.916	ENSACLG00000000424	tnrc6c1	94	45.279	Astatotilapia_calliptera
ENSMEUG00000005104	TNRC6C	100	75.416	ENSBTAG00000018658	TNRC6C	97	77.603	Bos_taurus
ENSMEUG00000005104	TNRC6C	99	89.583	ENSCJAG00000019431	TNRC6C	97	81.394	Callithrix_jacchus
ENSMEUG00000005104	TNRC6C	99	89.062	ENSCAFG00000005224	TNRC6C	96	72.276	Canis_familiaris
ENSMEUG00000005104	TNRC6C	99	89.062	ENSCAFG00020006661	TNRC6C	97	79.636	Canis_lupus_dingo
ENSMEUG00000005104	TNRC6C	100	76.928	ENSCHIG00000026004	TNRC6C	97	78.342	Capra_hircus
ENSMEUG00000005104	TNRC6C	96	90.625	ENSTSYG00000005403	TNRC6C	98	79.621	Carlito_syrichta
ENSMEUG00000005104	TNRC6C	100	74.429	ENSCAPG00000007307	TNRC6C	90	73.974	Cavia_aperea
ENSMEUG00000005104	TNRC6C	100	78.811	ENSCPOG00000000467	TNRC6C	98	79.105	Cavia_porcellus
ENSMEUG00000005104	TNRC6C	99	90.104	ENSCCAG00000030524	TNRC6C	97	81.939	Cebus_capucinus
ENSMEUG00000005104	TNRC6C	99	90.104	ENSCATG00000033135	TNRC6C	97	81.818	Cercocebus_atys
ENSMEUG00000005104	TNRC6C	100	80.518	ENSCLAG00000011139	TNRC6C	89	80.518	Chinchilla_lanigera
ENSMEUG00000005104	TNRC6C	99	90.104	ENSCSAG00000005167	TNRC6C	89	80.035	Chlorocebus_sabaeus
ENSMEUG00000005104	TNRC6C	75	77.632	ENSCHOG00000000088	TNRC6C	73	77.632	Choloepus_hoffmanni
ENSMEUG00000005104	TNRC6C	100	83.373	ENSCPBG00000027960	TNRC6C	97	83.475	Chrysemys_picta_bellii
ENSMEUG00000005104	TNRC6C	99	90.104	ENSCANG00000041771	TNRC6C	97	81.333	Colobus_angolensis_palliatus
ENSMEUG00000005104	TNRC6C	100	78.032	ENSCGRG00001022686	Tnrc6c	97	77.308	Cricetulus_griseus_chok1gshd
ENSMEUG00000005104	TNRC6C	100	78.929	ENSCGRG00000018041	Tnrc6c	97	77.308	Cricetulus_griseus_crigri
ENSMEUG00000005104	TNRC6C	99	45.098	ENSCSEG00000012744	tnrc6c1	89	45.582	Cynoglossus_semilaevis
ENSMEUG00000005104	TNRC6C	94	69.581	ENSDARG00000076847	tnrc6c1	93	62.761	Danio_rerio
ENSMEUG00000005104	TNRC6C	99	89.583	ENSDNOG00000003247	TNRC6C	92	79.207	Dasypus_novemcinctus
ENSMEUG00000005104	TNRC6C	100	75.059	ENSDORG00000004558	Tnrc6c	97	75.271	Dipodomys_ordii
ENSMEUG00000005104	TNRC6C	90	72.010	ENSETEG00000005527	TNRC6C	87	72.010	Echinops_telfairi
ENSMEUG00000005104	TNRC6C	97	79.988	ENSEASG00005004799	TNRC6C	97	80.049	Equus_asinus_asinus
ENSMEUG00000005104	TNRC6C	100	80.165	ENSECAG00000012486	TNRC6C	90	80.224	Equus_caballus
ENSMEUG00000005104	TNRC6C	96	85.859	ENSEEUG00000010008	TNRC6C	94	85.859	Erinaceus_europaeus
ENSMEUG00000005104	TNRC6C	99	86.979	ENSFCAG00000028358	TNRC6C	97	78.571	Felis_catus
ENSMEUG00000005104	TNRC6C	97	79.536	ENSFALG00000000848	TNRC6C	98	79.362	Ficedula_albicollis
ENSMEUG00000005104	TNRC6C	100	80.283	ENSFDAG00000010368	TNRC6C	98	80.400	Fukomys_damarensis
ENSMEUG00000005104	TNRC6C	92	75.401	ENSFHEG00000002936	tnrc6c1	83	74.468	Fundulus_heteroclitus
ENSMEUG00000005104	TNRC6C	100	81.243	ENSGALG00000001725	TNRC6C	97	82.959	Gallus_gallus
ENSMEUG00000005104	TNRC6C	94	76.471	ENSGAFG00000019019	tnrc6c1	84	75.532	Gambusia_affinis
ENSMEUG00000005104	TNRC6C	100	82.795	ENSGAGG00000022043	TNRC6C	96	83.089	Gopherus_agassizii
ENSMEUG00000005104	TNRC6C	99	89.119	ENSGGOG00000011304	TNRC6C	97	80.921	Gorilla_gorilla
ENSMEUG00000005104	TNRC6C	96	65.324	ENSHBUG00000010846	tnrc6c1	93	45.350	Haplochromis_burtoni
ENSMEUG00000005104	TNRC6C	100	80.812	ENSHGLG00000004809	TNRC6C	89	80.812	Heterocephalus_glaber_female
ENSMEUG00000005104	TNRC6C	100	79.496	ENSHGLG00100012597	TNRC6C	89	79.789	Heterocephalus_glaber_male
ENSMEUG00000005104	TNRC6C	99	47.315	ENSIPUG00000000818	tnrc6c1	89	47.336	Ictalurus_punctatus
ENSMEUG00000005104	TNRC6C	100	79.612	ENSSTOG00000009101	TNRC6C	98	79.553	Ictidomys_tridecemlineatus
ENSMEUG00000005104	TNRC6C	100	77.036	ENSJJAG00000017055	Tnrc6c	89	76.860	Jaculus_jaculus
ENSMEUG00000005104	TNRC6C	73	64.055	ENSKMAG00000021023	tnrc6c1	93	64.906	Kryptolebias_marmoratus
ENSMEUG00000005104	TNRC6C	100	71.007	ENSLACG00000015283	TNRC6C	98	71.065	Latimeria_chalumnae
ENSMEUG00000005104	TNRC6C	95	79.500	ENSLOCG00000013377	tnrc6c1	85	64.952	Lepisosteus_oculatus
ENSMEUG00000005104	TNRC6C	99	89.583	ENSLAFG00000011122	TNRC6C	96	77.037	Loxodonta_africana
ENSMEUG00000005104	TNRC6C	99	90.104	ENSMFAG00000043943	TNRC6C	97	81.879	Macaca_fascicularis
ENSMEUG00000005104	TNRC6C	99	90.104	ENSMMUG00000011924	TNRC6C	97	81.879	Macaca_mulatta
ENSMEUG00000005104	TNRC6C	99	90.104	ENSMNEG00000030405	TNRC6C	97	81.879	Macaca_nemestrina
ENSMEUG00000005104	TNRC6C	99	90.104	ENSMLEG00000033436	TNRC6C	97	81.879	Mandrillus_leucophaeus
ENSMEUG00000005104	TNRC6C	71	66.543	ENSMAMG00000023613	tnrc6c1	93	59.933	Mastacembelus_armatus
ENSMEUG00000005104	TNRC6C	96	65.324	ENSMZEG00005010920	tnrc6c1	93	58.292	Maylandia_zebra
ENSMEUG00000005104	TNRC6C	92	89.583	ENSMGAG00000003906	TNRC6C	83	86.224	Meleagris_gallopavo
ENSMEUG00000005104	TNRC6C	97	77.791	ENSMAUG00000021618	Tnrc6c	97	77.972	Mesocricetus_auratus
ENSMEUG00000005104	TNRC6C	98	91.209	ENSMICG00000003952	TNRC6C	97	81.576	Microcebus_murinus
ENSMEUG00000005104	TNRC6C	100	80.577	ENSMOCG00000015879	Tnrc6c	98	80.577	Microtus_ochrogaster
ENSMEUG00000005104	TNRC6C	71	65.909	ENSMMOG00000005203	tnrc6c1	92	66.318	Mola_mola
ENSMEUG00000005104	TNRC6C	100	88.380	ENSMODG00000001785	TNRC6C	89	88.087	Monodelphis_domestica
ENSMEUG00000005104	TNRC6C	100	79.988	MGP_CAROLIEiJ_G0017465	Tnrc6c	98	79.988	Mus_caroli
ENSMEUG00000005104	TNRC6C	100	79.812	ENSMUSG00000025571	Tnrc6c	98	79.812	Mus_musculus
ENSMEUG00000005104	TNRC6C	100	79.812	MGP_PahariEiJ_G0018593	Tnrc6c	98	79.812	Mus_pahari
ENSMEUG00000005104	TNRC6C	100	79.871	MGP_SPRETEiJ_G0018309	Tnrc6c	98	79.871	Mus_spretus
ENSMEUG00000005104	TNRC6C	99	89.062	ENSMPUG00000013348	TNRC6C	88	75.719	Mustela_putorius_furo
ENSMEUG00000005104	TNRC6C	100	70.525	ENSMLUG00000014431	TNRC6C	88	71.152	Myotis_lucifugus
ENSMEUG00000005104	TNRC6C	100	78.429	ENSNGAG00000012203	Tnrc6c	89	78.312	Nannospalax_galili
ENSMEUG00000005104	TNRC6C	96	65.445	ENSNBRG00000005344	tnrc6c1	94	45.815	Neolamprologus_brichardi
ENSMEUG00000005104	TNRC6C	99	90.625	ENSNLEG00000000047	TNRC6C	89	76.976	Nomascus_leucogenys
ENSMEUG00000005104	TNRC6C	97	80.594	ENSODEG00000012499	TNRC6C	97	80.655	Octodon_degus
ENSMEUG00000005104	TNRC6C	87	65.559	ENSONIG00000002210	tnrc6c1	90	56.200	Oreochromis_niloticus
ENSMEUG00000005104	TNRC6C	99	82.979	ENSOANG00000009758	-	82	82.979	Ornithorhynchus_anatinus
ENSMEUG00000005104	TNRC6C	84	70.723	ENSOCUG00000006122	TNRC6C	86	62.007	Oryctolagus_cuniculus
ENSMEUG00000005104	TNRC6C	96	64.223	ENSORLG00000009837	tnrc6c1	72	70.984	Oryzias_latipes
ENSMEUG00000005104	TNRC6C	94	73.262	ENSORLG00020016510	tnrc6c1	93	45.276	Oryzias_latipes_hni
ENSMEUG00000005104	TNRC6C	80	60.000	ENSORLG00015000171	tnrc6c1	95	40.119	Oryzias_latipes_hsok
ENSMEUG00000005104	TNRC6C	96	65.271	ENSOMEG00000000357	tnrc6c1	93	54.281	Oryzias_melastigma
ENSMEUG00000005104	TNRC6C	96	89.062	ENSOGAG00000007197	TNRC6C	98	77.429	Otolemur_garnettii
ENSMEUG00000005104	TNRC6C	91	80.868	ENSOARG00000006041	TNRC6C	86	81.460	Ovis_aries
ENSMEUG00000005104	TNRC6C	99	89.583	ENSPPAG00000027160	TNRC6C	97	81.576	Pan_paniscus
ENSMEUG00000005104	TNRC6C	99	86.979	ENSPPRG00000018881	TNRC6C	97	78.511	Panthera_pardus
ENSMEUG00000005104	TNRC6C	76	64.422	ENSPTIG00000008791	TNRC6C	86	83.154	Panthera_tigris_altaica
ENSMEUG00000005104	TNRC6C	99	89.583	ENSPTRG00000009699	TNRC6C	97	81.636	Pan_troglodytes
ENSMEUG00000005104	TNRC6C	99	90.104	ENSPANG00000019994	TNRC6C	97	81.697	Papio_anubis
ENSMEUG00000005104	TNRC6C	92	73.762	ENSPKIG00000005428	tnrc6c1	92	73.762	Paramormyrops_kingsleyae
ENSMEUG00000005104	TNRC6C	100	81.460	ENSPSIG00000018069	TNRC6C	98	81.695	Pelodiscus_sinensis
ENSMEUG00000005104	TNRC6C	60	52.685	ENSPMGG00000022911	tnrc6c1	71	68.156	Periophthalmus_magnuspinnatus
ENSMEUG00000005104	TNRC6C	100	78.910	ENSPEMG00000009785	Tnrc6c	97	76.946	Peromyscus_maniculatus_bairdii
ENSMEUG00000005104	TNRC6C	56	97.794	ENSPCIG00000017421	-	98	97.794	Phascolarctos_cinereus
ENSMEUG00000005104	TNRC6C	96	65.210	ENSPFOG00000012560	tnrc6c1	97	73.810	Poecilia_formosa
ENSMEUG00000005104	TNRC6C	92	68.159	ENSPLAG00000021055	tnrc6c1	94	56.381	Poecilia_latipinna
ENSMEUG00000005104	TNRC6C	99	90.104	ENSPPYG00000008679	TNRC6C	88	80.104	Pongo_abelii
ENSMEUG00000005104	TNRC6C	91	85.488	ENSPCAG00000012510	TNRC6C	91	85.488	Procavia_capensis
ENSMEUG00000005104	TNRC6C	96	90.625	ENSPCOG00000021451	TNRC6C	97	82.061	Propithecus_coquereli
ENSMEUG00000005104	TNRC6C	96	77.677	ENSPVAG00000002008	TNRC6C	93	77.929	Pteropus_vampyrus
ENSMEUG00000005104	TNRC6C	96	56.585	ENSPNYG00000014477	tnrc6c1	93	58.292	Pundamilia_nyererei
ENSMEUG00000005104	TNRC6C	97	78.982	ENSRNOG00000022395	Tnrc6c	97	79.164	Rattus_norvegicus
ENSMEUG00000005104	TNRC6C	99	90.104	ENSRBIG00000027777	TNRC6C	97	81.939	Rhinopithecus_bieti
ENSMEUG00000005104	TNRC6C	99	90.104	ENSRROG00000042912	TNRC6C	97	81.879	Rhinopithecus_roxellana
ENSMEUG00000005104	TNRC6C	99	90.104	ENSSBOG00000023981	TNRC6C	98	78.982	Saimiri_boliviensis_boliviensis
ENSMEUG00000005104	TNRC6C	71	63.714	ENSSFOG00015006475	tnrc6c1	89	64.395	Scleropages_formosus
ENSMEUG00000005104	TNRC6C	78	60.676	ENSSFOG00015004735	-	83	64.189	Scleropages_formosus
ENSMEUG00000005104	TNRC6C	99	45.257	ENSSMAG00000012761	tnrc6c1	95	46.470	Scophthalmus_maximus
ENSMEUG00000005104	TNRC6C	54	66.146	ENSSDUG00000002366	tnrc6c1	92	66.898	Seriola_dumerili
ENSMEUG00000005104	TNRC6C	73	65.969	ENSSLDG00000025613	tnrc6c1	93	47.090	Seriola_lalandi_dorsalis
ENSMEUG00000005104	TNRC6C	91	81.579	ENSSARG00000006816	TNRC6C	88	81.579	Sorex_araneus
ENSMEUG00000005104	TNRC6C	82	76.312	ENSSPUG00000007341	TNRC6C	91	76.865	Sphenodon_punctatus
ENSMEUG00000005104	TNRC6C	71	67.161	ENSSPAG00000014977	tnrc6c1	92	59.574	Stegastes_partitus
ENSMEUG00000005104	TNRC6C	97	73.742	ENSSSCG00000034373	TNRC6C	96	80.261	Sus_scrofa
ENSMEUG00000005104	TNRC6C	100	83.353	ENSTGUG00000007733	TNRC6C	98	83.294	Taeniopygia_guttata
ENSMEUG00000005104	TNRC6C	88	66.786	ENSTRUG00000011685	tnrc6c1	76	64.346	Takifugu_rubripes
ENSMEUG00000005104	TNRC6C	94	49.665	ENSTNIG00000005273	tnrc6c1	89	73.262	Tetraodon_nigroviridis
ENSMEUG00000005104	TNRC6C	63	81.641	ENSTBEG00000005046	TNRC6C	95	81.641	Tupaia_belangeri
ENSMEUG00000005104	TNRC6C	100	79.647	ENSTTRG00000010828	TNRC6C	97	79.706	Tursiops_truncatus
ENSMEUG00000005104	TNRC6C	94	89.583	ENSUMAG00000013614	TNRC6C	86	83.516	Ursus_maritimus
ENSMEUG00000005104	TNRC6C	96	89.583	ENSVVUG00000015268	TNRC6C	97	80.848	Vulpes_vulpes
ENSMEUG00000005104	TNRC6C	97	70.078	ENSXETG00000019470	tnrc6c	97	69.819	Xenopus_tropicalis
ENSMEUG00000005104	TNRC6C	96	65.035	ENSXMAG00000025971	tnrc6c1	93	65.620	Xiphophorus_maculatus