EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMEUG00000005475 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Plus strand
Length: 22311 bases
Position: chrGeneScaffold_4221:584-22894
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000005008	RRM_1	PF00076.22	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000005493	-	387	-	ENSMEUP00000005008	129 (aa)	-	UPI0001B1FE4D

Gene Model

Click here to download ENSMEUG00000005475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000005475's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMEUG00000005475	-	71	37.179	ENSMEUG00000008352	-	97	37.179
ENSMEUG00000005475	-	75	36.145	ENSMEUG00000013675	HNRNPA0	59	36.471
ENSMEUG00000005475	-	82	48.148	ENSMEUG00000014479	-	55	49.057

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000005475	-	100	80.435	ENSG00000132819	RBM38	100	80.992	Homo_sapiens
ENSMEUG00000005475	-	84	80.357	ENSAPOG00000009939	-	51	80.357	Acanthochromis_polyacanthus
ENSMEUG00000005475	-	86	80.172	ENSACIG00000012502	-	99	80.172	Amphilophus_citrinellus
ENSMEUG00000005475	-	100	70.073	ENSAOCG00000012559	RBM38	60	70.073	Amphiprion_ocellaris
ENSMEUG00000005475	-	99	67.391	ENSAPEG00000013137	rbm38	59	67.391	Amphiprion_percula
ENSMEUG00000005475	-	95	68.217	ENSATEG00000016366	rbm38	56	68.217	Anabas_testudineus
ENSMEUG00000005475	-	86	85.217	ENSANAG00000031959	RBM38	100	80.992	Aotus_nancymaae
ENSMEUG00000005475	-	100	71.642	ENSAMXG00000015601	-	55	71.642	Astyanax_mexicanus
ENSMEUG00000005475	-	100	64.179	ENSAMXG00000038120	rbm38	55	64.179	Astyanax_mexicanus
ENSMEUG00000005475	-	100	77.536	ENSBTAG00000008105	RBM38	58	77.536	Bos_taurus
ENSMEUG00000005475	-	66	76.404	WBGene00006321	sup-12	59	78.652	Caenorhabditis_elegans
ENSMEUG00000005475	-	100	81.159	ENSCJAG00000019139	RBM38	100	80.992	Callithrix_jacchus
ENSMEUG00000005475	-	100	79.710	ENSCAFG00020021943	RBM38	58	79.710	Canis_lupus_dingo
ENSMEUG00000005475	-	100	76.812	ENSCHIG00000002609	RBM38	58	76.812	Capra_hircus
ENSMEUG00000005475	-	100	79.710	ENSCPOG00000012781	RBM38	58	79.710	Cavia_porcellus
ENSMEUG00000005475	-	100	81.159	ENSCCAG00000036872	RBM38	100	80.992	Cebus_capucinus
ENSMEUG00000005475	-	100	80.435	ENSCATG00000032133	RBM38	100	80.992	Cercocebus_atys
ENSMEUG00000005475	-	92	80.469	ENSCLAG00000005906	RBM38	56	80.469	Chinchilla_lanigera
ENSMEUG00000005475	-	100	80.435	ENSCSAG00000015503	RBM38	58	80.435	Chlorocebus_sabaeus
ENSMEUG00000005475	-	86	89.565	ENSCPBG00000024059	RBM38	53	89.565	Chrysemys_picta_bellii
ENSMEUG00000005475	-	98	56.934	ENSCANG00000030105	-	53	60.902	Colobus_angolensis_palliatus
ENSMEUG00000005475	-	100	72.464	ENSCGRG00001012928	Rbm38	57	76.087	Cricetulus_griseus_chok1gshd
ENSMEUG00000005475	-	98	72.519	ENSCSEG00000004701	-	56	72.519	Cynoglossus_semilaevis
ENSMEUG00000005475	-	88	74.590	ENSDARG00000058818	rbm38	50	77.885	Danio_rerio
ENSMEUG00000005475	-	86	83.478	ENSDNOG00000032004	RBM38	55	83.478	Dasypus_novemcinctus
ENSMEUG00000005475	-	76	79.412	ENSEBUG00000015164	rbm38	62	79.412	Eptatretus_burgeri
ENSMEUG00000005475	-	100	78.261	ENSECAG00000007700	RBM38	58	78.261	Equus_caballus
ENSMEUG00000005475	-	100	77.372	ENSEEUG00000013489	RBM38	57	77.372	Erinaceus_europaeus
ENSMEUG00000005475	-	86	78.448	ENSELUG00000000585	-	52	78.448	Esox_lucius
ENSMEUG00000005475	-	87	73.984	ENSELUG00000005849	-	51	73.984	Esox_lucius
ENSMEUG00000005475	-	100	79.710	ENSFCAG00000042916	RBM38	100	80.165	Felis_catus
ENSMEUG00000005475	-	88	88.889	ENSFALG00000010805	RBM38	61	88.889	Ficedula_albicollis
ENSMEUG00000005475	-	84	79.464	ENSFHEG00000006160	-	50	79.464	Fundulus_heteroclitus
ENSMEUG00000005475	-	86	77.586	ENSGMOG00000016655	-	62	77.586	Gadus_morhua
ENSMEUG00000005475	-	86	88.696	ENSGALG00000026081	RBM38	53	88.696	Gallus_gallus
ENSMEUG00000005475	-	86	72.414	ENSGACG00000015224	rbm38	57	72.414	Gasterosteus_aculeatus
ENSMEUG00000005475	-	86	76.923	ENSGACG00000009873	-	53	76.923	Gasterosteus_aculeatus
ENSMEUG00000005475	-	86	89.565	ENSGAGG00000001187	RBM38	53	89.565	Gopherus_agassizii
ENSMEUG00000005475	-	95	67.188	ENSHBUG00000012058	rbm38	54	67.188	Haplochromis_burtoni
ENSMEUG00000005475	-	86	78.632	ENSHBUG00000011778	-	51	78.632	Haplochromis_burtoni
ENSMEUG00000005475	-	100	79.710	ENSHGLG00000015077	RBM38	58	79.710	Heterocephalus_glaber_female
ENSMEUG00000005475	-	100	71.324	ENSIPUG00000019349	-	55	71.324	Ictalurus_punctatus
ENSMEUG00000005475	-	52	80.556	ENSJJAG00000016299	-	90	80.556	Jaculus_jaculus
ENSMEUG00000005475	-	87	78.814	ENSLBEG00000016163	RBM38	51	78.814	Labrus_bergylta
ENSMEUG00000005475	-	86	80.172	ENSLOCG00000003456	rbm38	51	80.172	Lepisosteus_oculatus
ENSMEUG00000005475	-	96	80.451	ENSMFAG00000043808	RBM38	96	81.034	Macaca_fascicularis
ENSMEUG00000005475	-	100	80.435	ENSMMUG00000031391	RBM38	100	80.992	Macaca_mulatta
ENSMEUG00000005475	-	100	80.435	ENSMNEG00000034683	RBM38	100	80.992	Macaca_nemestrina
ENSMEUG00000005475	-	87	70.690	ENSMLEG00000043261	-	94	70.690	Mandrillus_leucophaeus
ENSMEUG00000005475	-	86	78.632	ENSMZEG00005000849	-	51	78.632	Maylandia_zebra
ENSMEUG00000005475	-	100	71.739	ENSMAUG00000021211	Rbm38	57	75.362	Mesocricetus_auratus
ENSMEUG00000005475	-	86	85.217	ENSMICG00000038011	RBM38	53	85.217	Microcebus_murinus
ENSMEUG00000005475	-	98	74.242	ENSMMOG00000020051	-	58	74.242	Mola_mola
ENSMEUG00000005475	-	100	91.045	ENSMODG00000016458	RBM38	57	91.045	Monodelphis_domestica
ENSMEUG00000005475	-	91	66.942	ENSMALG00000022327	rbm38	52	66.942	Monopterus_albus
ENSMEUG00000005475	-	100	73.913	MGP_CAROLIEiJ_G0024745	Rbm38	90	77.778	Mus_caroli
ENSMEUG00000005475	-	100	73.188	ENSMUSG00000027510	Rbm38	90	77.778	Mus_musculus
ENSMEUG00000005475	-	100	74.638	MGP_PahariEiJ_G0026186	Rbm38	90	79.167	Mus_pahari
ENSMEUG00000005475	-	100	73.188	MGP_SPRETEiJ_G0025665	Rbm38	90	77.778	Mus_spretus
ENSMEUG00000005475	-	86	84.348	ENSMPUG00000006518	RBM38	57	84.348	Mustela_putorius_furo
ENSMEUG00000005475	-	86	83.478	ENSMLUG00000011140	RBM38	53	83.478	Myotis_lucifugus
ENSMEUG00000005475	-	53	83.099	ENSNGAG00000014017	-	64	83.099	Nannospalax_galili
ENSMEUG00000005475	-	95	67.969	ENSNBRG00000022685	rbm38	53	67.969	Neolamprologus_brichardi
ENSMEUG00000005475	-	100	79.710	ENSODEG00000007980	RBM38	58	79.710	Octodon_degus
ENSMEUG00000005475	-	91	70.492	ENSONIG00000017073	rbm38	50	70.492	Oreochromis_niloticus
ENSMEUG00000005475	-	89	85.714	ENSOANG00000009259	RBM38	50	83.200	Ornithorhynchus_anatinus
ENSMEUG00000005475	-	96	68.702	ENSORLG00000012154	rbm38	52	68.702	Oryzias_latipes
ENSMEUG00000005475	-	96	67.939	ENSORLG00020017871	rbm38	52	67.939	Oryzias_latipes_hni
ENSMEUG00000005475	-	96	67.939	ENSORLG00015012606	rbm38	52	67.939	Oryzias_latipes_hsok
ENSMEUG00000005475	-	96	67.176	ENSOMEG00000006805	rbm38	52	67.176	Oryzias_melastigma
ENSMEUG00000005475	-	100	79.856	ENSOGAG00000029136	RBM38	58	79.856	Otolemur_garnettii
ENSMEUG00000005475	-	100	79.710	ENSPPRG00000009507	RBM38	100	80.165	Panthera_pardus
ENSMEUG00000005475	-	86	85.217	ENSPTRG00000045845	-	63	85.217	Pan_troglodytes
ENSMEUG00000005475	-	88	84.615	ENSPTRG00000013661	RBM38	100	80.992	Pan_troglodytes
ENSMEUG00000005475	-	100	80.435	ENSPANG00000020919	-	100	80.992	Papio_anubis
ENSMEUG00000005475	-	82	69.091	ENSPANG00000033127	-	50	67.273	Papio_anubis
ENSMEUG00000005475	-	100	72.180	ENSPKIG00000018122	-	94	80.000	Paramormyrops_kingsleyae
ENSMEUG00000005475	-	100	66.667	ENSPKIG00000025417	rbm38	56	66.667	Paramormyrops_kingsleyae
ENSMEUG00000005475	-	88	88.136	ENSPSIG00000011649	RBM38	51	88.136	Pelodiscus_sinensis
ENSMEUG00000005475	-	96	66.667	ENSPMGG00000011343	rbm38	52	66.667	Periophthalmus_magnuspinnatus
ENSMEUG00000005475	-	100	91.045	ENSPCIG00000013648	RBM38	57	91.045	Phascolarctos_cinereus
ENSMEUG00000005475	-	100	79.137	ENSPCOG00000026201	RBM38	100	81.967	Propithecus_coquereli
ENSMEUG00000005475	-	86	79.310	ENSPNYG00000019727	-	99	79.310	Pundamilia_nyererei
ENSMEUG00000005475	-	95	66.406	ENSPNYG00000021373	rbm38	51	70.000	Pundamilia_nyererei
ENSMEUG00000005475	-	88	75.610	ENSPNAG00000010596	rbm38	53	75.610	Pygocentrus_nattereri
ENSMEUG00000005475	-	100	70.149	ENSPNAG00000015123	-	87	76.786	Pygocentrus_nattereri
ENSMEUG00000005475	-	100	72.464	ENSRNOG00000006420	Rbm38	57	76.087	Rattus_norvegicus
ENSMEUG00000005475	-	99	67.391	ENSRROG00000036388	-	77	69.863	Rhinopithecus_roxellana
ENSMEUG00000005475	-	86	86.087	ENSSBOG00000031053	RBM38	93	86.000	Saimiri_boliviensis_boliviensis
ENSMEUG00000005475	-	91	71.311	ENSSLDG00000010845	rbm38	51	73.276	Seriola_lalandi_dorsalis
ENSMEUG00000005475	-	84	80.357	ENSSPAG00000020989	RBM38	51	80.357	Stegastes_partitus
ENSMEUG00000005475	-	100	79.710	ENSSSCG00000007504	RBM38	58	79.710	Sus_scrofa
ENSMEUG00000005475	-	91	71.311	ENSTRUG00000024954	rbm38	50	71.311	Takifugu_rubripes
ENSMEUG00000005475	-	86	77.778	ENSTNIG00000007093	-	53	77.778	Tetraodon_nigroviridis
ENSMEUG00000005475	-	85	73.729	ENSTBEG00000001689	-	50	73.729	Tupaia_belangeri
ENSMEUG00000005475	-	100	79.710	ENSUAMG00000019780	RBM38	58	79.710	Ursus_americanus
ENSMEUG00000005475	-	100	79.710	ENSVVUG00000017246	RBM38	58	79.710	Vulpes_vulpes
ENSMEUG00000005475	-	87	82.759	ENSXETG00000011268	rbm38	52	82.759	Xenopus_tropicalis
ENSMEUG00000005475	-	84	76.923	ENSXCOG00000017324	-	53	76.923	Xiphophorus_couchianus