EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMEUG00000005852 (Gene tree)
Gene ID: -
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Plus strand
Length: 25395 bases
Position: chrGeneScaffold_7831:2324-27718
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000005355	ResIII	PF04851.15	2.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000005880	CHD3-201	5772	-	ENSMEUP00000005355	1923 (aa)	-	UPI0001B206F3

Gene Model

Click here to download ENSMEUG00000005852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000005852's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMEUG00000005852	CHD3	59	83.898	ENSMEUG00000015294	-	64	83.898

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000005852	CHD3	87	91.209	ENSG00000170004	CHD3	99	92.235	Homo_sapiens
ENSMEUG00000005852	CHD3	72	87.209	ENSAPOG00000005614	chd3	83	87.209	Acanthochromis_polyacanthus
ENSMEUG00000005852	CHD3	58	86.395	ENSAMEG00000003025	-	82	86.395	Ailuropoda_melanoleuca
ENSMEUG00000005852	CHD3	72	87.791	ENSACIG00000019671	chd3	88	87.791	Amphilophus_citrinellus
ENSMEUG00000005852	CHD3	84	80.405	ENSAOCG00000023784	chd3	86	87.791	Amphiprion_ocellaris
ENSMEUG00000005852	CHD3	84	80.405	ENSAPEG00000006341	chd3	78	80.268	Amphiprion_percula
ENSMEUG00000005852	CHD3	84	81.379	ENSATEG00000000848	chd3	85	86.857	Anabas_testudineus
ENSMEUG00000005852	CHD3	86	84.816	ENSACAG00000004276	CHD3	80	84.816	Anolis_carolinensis
ENSMEUG00000005852	CHD3	87	91.484	ENSANAG00000034323	CHD3	86	91.484	Aotus_nancymaae
ENSMEUG00000005852	CHD3	84	80.906	ENSACLG00000009222	chd3	90	78.634	Astatotilapia_calliptera
ENSMEUG00000005852	CHD3	87	90.151	ENSBTAG00000014377	CHD3	83	90.491	Bos_taurus
ENSMEUG00000005852	CHD3	87	91.209	ENSCJAG00000014766	CHD3	86	91.078	Callithrix_jacchus
ENSMEUG00000005852	CHD3	87	91.209	ENSCAFG00000016859	CHD3	84	91.209	Canis_familiaris
ENSMEUG00000005852	CHD3	85	91.209	ENSCAFG00020007422	CHD3	87	91.209	Canis_lupus_dingo
ENSMEUG00000005852	CHD3	87	90.934	ENSCHIG00000016737	CHD3	85	90.934	Capra_hircus
ENSMEUG00000005852	CHD3	87	91.209	ENSTSYG00000035658	CHD3	86	90.962	Carlito_syrichta
ENSMEUG00000005852	CHD3	83	97.778	ENSCAPG00000014864	CHD3	81	97.778	Cavia_aperea
ENSMEUG00000005852	CHD3	87	91.209	ENSCPOG00000022653	CHD3	84	91.209	Cavia_porcellus
ENSMEUG00000005852	CHD3	86	93.675	ENSCCAG00000034792	CHD3	82	93.675	Cebus_capucinus
ENSMEUG00000005852	CHD3	87	91.209	ENSCATG00000041717	CHD3	86	91.078	Cercocebus_atys
ENSMEUG00000005852	CHD3	86	93.373	ENSCLAG00000010523	CHD3	86	93.373	Chinchilla_lanigera
ENSMEUG00000005852	CHD3	87	91.209	ENSCSAG00000011122	CHD3	86	91.209	Chlorocebus_sabaeus
ENSMEUG00000005852	CHD3	78	84.816	ENSCPBG00000011966	CHD3	87	98.795	Chrysemys_picta_bellii
ENSMEUG00000005852	CHD3	87	91.078	ENSCANG00000037641	CHD3	86	91.078	Colobus_angolensis_palliatus
ENSMEUG00000005852	CHD3	87	91.484	ENSCGRG00001011306	Chd3	86	91.484	Cricetulus_griseus_chok1gshd
ENSMEUG00000005852	CHD3	82	97.980	ENSCGRG00000007878	Chd3	86	97.980	Cricetulus_griseus_crigri
ENSMEUG00000005852	CHD3	84	80.066	ENSCSEG00000004489	chd3	90	80.066	Cynoglossus_semilaevis
ENSMEUG00000005852	CHD3	81	81.673	ENSCVAG00000007293	chd3	87	81.673	Cyprinodon_variegatus
ENSMEUG00000005852	CHD3	79	84.151	ENSDARG00000021405	chd3	86	83.704	Danio_rerio
ENSMEUG00000005852	CHD3	79	93.011	ENSDNOG00000047846	CHD3	76	93.011	Dasypus_novemcinctus
ENSMEUG00000005852	CHD3	86	92.447	ENSDORG00000010713	Chd3	86	92.447	Dipodomys_ordii
ENSMEUG00000005852	CHD3	81	100.000	ENSETEG00000017733	CHD3	81	100.000	Echinops_telfairi
ENSMEUG00000005852	CHD3	62	73.077	ENSEBUG00000008310	chd3	79	73.077	Eptatretus_burgeri
ENSMEUG00000005852	CHD3	82	91.484	ENSEASG00005019360	CHD3	87	91.484	Equus_asinus_asinus
ENSMEUG00000005852	CHD3	82	91.209	ENSECAG00000010051	CHD3	87	91.209	Equus_caballus
ENSMEUG00000005852	CHD3	78	89.600	ENSEEUG00000015205	CHD3	77	89.600	Erinaceus_europaeus
ENSMEUG00000005852	CHD3	71	90.476	ENSELUG00000019499	chd3	88	90.476	Esox_lucius
ENSMEUG00000005852	CHD3	87	90.962	ENSFCAG00000009629	CHD3	82	90.934	Felis_catus
ENSMEUG00000005852	CHD3	85	91.209	ENSFDAG00000008220	CHD3	82	91.209	Fukomys_damarensis
ENSMEUG00000005852	CHD3	81	75.319	ENSGMOG00000013599	chd3	80	75.319	Gadus_morhua
ENSMEUG00000005852	CHD3	55	73.762	ENSGAFG00000004055	chd3	89	73.762	Gambusia_affinis
ENSMEUG00000005852	CHD3	85	79.677	ENSGACG00000019275	chd3	83	79.677	Gasterosteus_aculeatus
ENSMEUG00000005852	CHD3	63	84.599	ENSGAGG00000013164	CHD3	86	81.330	Gopherus_agassizii
ENSMEUG00000005852	CHD3	87	91.484	ENSGGOG00000013496	CHD3	86	90.846	Gorilla_gorilla
ENSMEUG00000005852	CHD3	86	93.072	ENSHGLG00000012017	CHD3	85	90.934	Heterocephalus_glaber_female
ENSMEUG00000005852	CHD3	77	99.474	ENSHGLG00100013902	CHD3	84	99.474	Heterocephalus_glaber_male
ENSMEUG00000005852	CHD3	84	77.004	ENSHCOG00000010170	chd3	82	77.004	Hippocampus_comes
ENSMEUG00000005852	CHD3	77	80.303	ENSIPUG00000003271	chd3	86	80.303	Ictalurus_punctatus
ENSMEUG00000005852	CHD3	87	91.078	ENSSTOG00000025907	CHD3	88	91.078	Ictidomys_tridecemlineatus
ENSMEUG00000005852	CHD3	87	90.730	ENSJJAG00000017633	Chd3	88	90.498	Jaculus_jaculus
ENSMEUG00000005852	CHD3	77	89.573	ENSKMAG00000019292	chd3	80	89.573	Kryptolebias_marmoratus
ENSMEUG00000005852	CHD3	83	75.540	ENSLBEG00000028485	chd3	83	75.540	Labrus_bergylta
ENSMEUG00000005852	CHD3	84	77.027	ENSLACG00000008031	CHD3	84	77.027	Latimeria_chalumnae
ENSMEUG00000005852	CHD3	86	79.070	ENSLOCG00000013965	chd3	82	79.070	Lepisosteus_oculatus
ENSMEUG00000005852	CHD3	81	95.918	ENSLAFG00000000572	CHD3	83	95.918	Loxodonta_africana
ENSMEUG00000005852	CHD3	87	91.209	ENSMFAG00000020113	CHD3	86	91.209	Macaca_fascicularis
ENSMEUG00000005852	CHD3	87	91.111	ENSMMUG00000022221	CHD3	85	91.111	Macaca_mulatta
ENSMEUG00000005852	CHD3	87	91.078	ENSMNEG00000001728	CHD3	87	90.934	Macaca_nemestrina
ENSMEUG00000005852	CHD3	87	91.209	ENSMLEG00000032249	CHD3	86	91.078	Mandrillus_leucophaeus
ENSMEUG00000005852	CHD3	72	87.209	ENSMAMG00000000564	chd3	84	87.209	Mastacembelus_armatus
ENSMEUG00000005852	CHD3	87	90.934	ENSMAUG00000013873	Chd3	87	90.934	Mesocricetus_auratus
ENSMEUG00000005852	CHD3	87	91.484	ENSMICG00000008741	CHD3	84	91.233	Microcebus_murinus
ENSMEUG00000005852	CHD3	87	91.758	ENSMOCG00000004848	Chd3	86	91.758	Microtus_ochrogaster
ENSMEUG00000005852	CHD3	82	86.873	ENSMMOG00000012699	chd3	83	88.106	Mola_mola
ENSMEUG00000005852	CHD3	82	93.307	ENSMODG00000007509	CHD3	88	93.307	Monodelphis_domestica
ENSMEUG00000005852	CHD3	87	90.437	MGP_CAROLIEiJ_G0016564	Chd3	88	89.352	Mus_caroli
ENSMEUG00000005852	CHD3	87	90.437	ENSMUSG00000018474	Chd3	88	89.120	Mus_musculus
ENSMEUG00000005852	CHD3	87	90.437	MGP_PahariEiJ_G0017695	Chd3	88	89.571	Mus_pahari
ENSMEUG00000005852	CHD3	87	90.164	MGP_SPRETEiJ_G0017400	Chd3	88	89.236	Mus_spretus
ENSMEUG00000005852	CHD3	76	90.685	ENSMPUG00000008861	CHD3	86	90.685	Mustela_putorius_furo
ENSMEUG00000005852	CHD3	87	90.685	ENSMLUG00000014643	-	84	90.685	Myotis_lucifugus
ENSMEUG00000005852	CHD3	87	91.209	ENSNGAG00000000773	Chd3	84	91.209	Nannospalax_galili
ENSMEUG00000005852	CHD3	73	88.372	ENSNBRG00000000636	chd3	82	88.372	Neolamprologus_brichardi
ENSMEUG00000005852	CHD3	87	90.614	ENSNLEG00000009770	CHD3	86	91.078	Nomascus_leucogenys
ENSMEUG00000005852	CHD3	84	90.074	ENSOPRG00000011069	CHD3	87	90.074	Ochotona_princeps
ENSMEUG00000005852	CHD3	87	91.209	ENSODEG00000017785	CHD3	85	91.209	Octodon_degus
ENSMEUG00000005852	CHD3	84	79.730	ENSONIG00000009292	chd3	84	79.730	Oreochromis_niloticus
ENSMEUG00000005852	CHD3	87	87.644	ENSOCUG00000029299	CHD3	86	86.427	Oryctolagus_cuniculus
ENSMEUG00000005852	CHD3	68	78.205	ENSORLG00000007107	chd3	77	78.205	Oryzias_latipes
ENSMEUG00000005852	CHD3	53	66.667	ENSORLG00020008387	chd3	85	66.667	Oryzias_latipes_hni
ENSMEUG00000005852	CHD3	73	85.246	ENSOMEG00000013691	chd3	86	79.393	Oryzias_melastigma
ENSMEUG00000005852	CHD3	87	91.209	ENSOGAG00000003216	CHD3	86	91.209	Otolemur_garnettii
ENSMEUG00000005852	CHD3	87	87.738	ENSOARG00000017855	CHD3	84	87.893	Ovis_aries
ENSMEUG00000005852	CHD3	87	90.151	ENSPPAG00000032886	CHD3	85	90.151	Pan_paniscus
ENSMEUG00000005852	CHD3	87	91.209	ENSPPRG00000000626	CHD3	86	90.382	Panthera_pardus
ENSMEUG00000005852	CHD3	87	91.484	ENSPTRG00000008714	CHD3	86	91.078	Pan_troglodytes
ENSMEUG00000005852	CHD3	87	91.209	ENSPANG00000023938	CHD3	86	91.209	Papio_anubis
ENSMEUG00000005852	CHD3	81	88.479	ENSPKIG00000006305	chd3	85	88.479	Paramormyrops_kingsleyae
ENSMEUG00000005852	CHD3	51	79.372	ENSPSIG00000010177	CHD3	89	79.821	Pelodiscus_sinensis
ENSMEUG00000005852	CHD3	87	91.209	ENSPEMG00000014262	Chd3	85	91.209	Peromyscus_maniculatus_bairdii
ENSMEUG00000005852	CHD3	85	98.462	ENSPCIG00000005442	CHD3	88	97.967	Phascolarctos_cinereus
ENSMEUG00000005852	CHD3	84	79.863	ENSPFOG00000012464	chd3	77	78.361	Poecilia_formosa
ENSMEUG00000005852	CHD3	80	86.957	ENSPLAG00000002887	chd3	84	86.957	Poecilia_latipinna
ENSMEUG00000005852	CHD3	83	83.764	ENSPREG00000011044	chd3	89	79.610	Poecilia_reticulata
ENSMEUG00000005852	CHD3	87	91.484	ENSPPYG00000007940	CHD3	86	91.484	Pongo_abelii
ENSMEUG00000005852	CHD3	84	93.387	ENSPCAG00000004350	CHD3	82	92.786	Procavia_capensis
ENSMEUG00000005852	CHD3	87	91.209	ENSPCOG00000020952	CHD3	85	90.959	Propithecus_coquereli
ENSMEUG00000005852	CHD3	74	99.363	ENSPVAG00000016344	CHD3	70	99.363	Pteropus_vampyrus
ENSMEUG00000005852	CHD3	83	79.318	ENSPNAG00000020393	chd3	88	81.159	Pygocentrus_nattereri
ENSMEUG00000005852	CHD3	82	90.710	ENSRNOG00000009722	Chd3	87	90.710	Rattus_norvegicus
ENSMEUG00000005852	CHD3	87	91.209	ENSRBIG00000033562	CHD3	85	91.209	Rhinopithecus_bieti
ENSMEUG00000005852	CHD3	87	91.484	ENSRROG00000029554	CHD3	86	91.078	Rhinopithecus_roxellana
ENSMEUG00000005852	CHD3	87	91.484	ENSSBOG00000020719	CHD3	87	91.484	Saimiri_boliviensis_boliviensis
ENSMEUG00000005852	CHD3	87	94.412	ENSSHAG00000014412	CHD3	87	94.412	Sarcophilus_harrisii
ENSMEUG00000005852	CHD3	73	83.824	ENSSFOG00015023123	chd3	81	83.824	Scleropages_formosus
ENSMEUG00000005852	CHD3	72	91.304	ENSSMAG00000006451	chd3	84	87.209	Scophthalmus_maximus
ENSMEUG00000005852	CHD3	84	80.068	ENSSPAG00000013694	chd3	88	80.000	Stegastes_partitus
ENSMEUG00000005852	CHD3	87	90.959	ENSSSCG00000021363	CHD3	87	90.959	Sus_scrofa
ENSMEUG00000005852	CHD3	68	77.234	ENSTRUG00000014990	chd3	79	77.234	Takifugu_rubripes
ENSMEUG00000005852	CHD3	84	80.392	ENSTNIG00000012998	chd3	85	80.392	Tetraodon_nigroviridis
ENSMEUG00000005852	CHD3	58	100.000	ENSTBEG00000011454	-	63	100.000	Tupaia_belangeri
ENSMEUG00000005852	CHD3	86	90.934	ENSTTRG00000010295	CHD3	82	93.380	Tursiops_truncatus
ENSMEUG00000005852	CHD3	80	95.726	ENSUAMG00000005475	CHD3	86	95.726	Ursus_americanus
ENSMEUG00000005852	CHD3	85	91.209	ENSVVUG00000028011	CHD3	86	91.209	Vulpes_vulpes
ENSMEUG00000005852	CHD3	86	73.830	ENSXETG00000012991	chd3	78	73.830	Xenopus_tropicalis
ENSMEUG00000005852	CHD3	72	86.127	ENSXMAG00000016035	chd3	89	86.127	Xiphophorus_maculatus