EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000006603 (Gene tree)
Gene ID: -
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Plus strand
Length: 25277 bases
Position: chrGeneScaffold_7302:2949-28225
Accession: 16060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000006023	TruB_N	PF01509.18	5.5e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000006616	TRUB1-201	810	-	ENSMEUP00000006023	270 (aa)	-	UPI0001B2169E

Gene Model

Click here to download ENSMEUG00000006603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000006603's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000006603	TRUB1	78	87.204	ENSG00000165832	TRUB1	58	90.050	Homo_sapiens
ENSMEUG00000006603	TRUB1	74	70.149	ENSAPOG00000020565	trub1	73	70.149	Acanthochromis_polyacanthus
ENSMEUG00000006603	TRUB1	78	87.204	ENSAMEG00000014931	TRUB1	57	90.050	Ailuropoda_melanoleuca
ENSMEUG00000006603	TRUB1	76	62.621	ENSACIG00000003060	trub1	67	63.682	Amphilophus_citrinellus
ENSMEUG00000006603	TRUB1	74	69.652	ENSAOCG00000017188	trub1	73	69.652	Amphiprion_ocellaris
ENSMEUG00000006603	TRUB1	76	68.447	ENSAPEG00000015209	trub1	73	69.652	Amphiprion_percula
ENSMEUG00000006603	TRUB1	75	70.792	ENSATEG00000023291	trub1	72	70.647	Anabas_testudineus
ENSMEUG00000006603	TRUB1	79	80.189	ENSAPLG00000006808	TRUB1	72	81.592	Anas_platyrhynchos
ENSMEUG00000006603	TRUB1	77	71.292	ENSACAG00000009282	TRUB1	72	71.642	Anolis_carolinensis
ENSMEUG00000006603	TRUB1	78	88.152	ENSANAG00000022870	TRUB1	57	91.045	Aotus_nancymaae
ENSMEUG00000006603	TRUB1	77	67.788	ENSACLG00000000823	trub1	72	69.652	Astatotilapia_calliptera
ENSMEUG00000006603	TRUB1	77	69.231	ENSAMXG00000015845	trub1	67	71.144	Astyanax_mexicanus
ENSMEUG00000006603	TRUB1	78	87.204	ENSBTAG00000012955	TRUB1	57	90.050	Bos_taurus
ENSMEUG00000006603	TRUB1	78	88.152	ENSCJAG00000047815	TRUB1	57	91.045	Callithrix_jacchus
ENSMEUG00000006603	TRUB1	78	88.152	ENSCAFG00000011688	TRUB1	57	91.045	Canis_familiaris
ENSMEUG00000006603	TRUB1	78	88.152	ENSCAFG00020013237	TRUB1	57	91.045	Canis_lupus_dingo
ENSMEUG00000006603	TRUB1	78	87.204	ENSCHIG00000020884	TRUB1	60	90.050	Capra_hircus
ENSMEUG00000006603	TRUB1	78	87.204	ENSTSYG00000000446	TRUB1	57	90.050	Carlito_syrichta
ENSMEUG00000006603	TRUB1	55	85.906	ENSCAPG00000017088	TRUB1	63	85.906	Cavia_aperea
ENSMEUG00000006603	TRUB1	68	86.957	ENSCPOG00000040236	-	75	87.363	Cavia_porcellus
ENSMEUG00000006603	TRUB1	81	77.169	ENSCPOG00000030129	-	72	86.486	Cavia_porcellus
ENSMEUG00000006603	TRUB1	78	88.152	ENSCCAG00000028842	TRUB1	57	91.045	Cebus_capucinus
ENSMEUG00000006603	TRUB1	78	88.152	ENSCATG00000033431	TRUB1	57	91.045	Cercocebus_atys
ENSMEUG00000006603	TRUB1	70	85.185	ENSCLAG00000008664	TRUB1	75	87.363	Chinchilla_lanigera
ENSMEUG00000006603	TRUB1	78	88.152	ENSCSAG00000004891	TRUB1	57	91.045	Chlorocebus_sabaeus
ENSMEUG00000006603	TRUB1	78	76.303	ENSCHOG00000011931	TRUB1	59	78.607	Choloepus_hoffmanni
ENSMEUG00000006603	TRUB1	79	81.221	ENSCPBG00000003051	TRUB1	69	84.080	Chrysemys_picta_bellii
ENSMEUG00000006603	TRUB1	78	88.152	ENSCANG00000029445	TRUB1	57	91.045	Colobus_angolensis_palliatus
ENSMEUG00000006603	TRUB1	63	85.799	ENSCGRG00001016772	-	57	85.380	Cricetulus_griseus_chok1gshd
ENSMEUG00000006603	TRUB1	72	75.897	ENSCGRG00001010322	-	53	76.119	Cricetulus_griseus_chok1gshd
ENSMEUG00000006603	TRUB1	72	86.667	ENSCGRG00000010806	Trub1	61	87.065	Cricetulus_griseus_crigri
ENSMEUG00000006603	TRUB1	78	66.667	ENSCSEG00000011261	trub1	65	69.154	Cynoglossus_semilaevis
ENSMEUG00000006603	TRUB1	76	69.756	ENSCVAG00000008791	trub1	62	70.647	Cyprinodon_variegatus
ENSMEUG00000006603	TRUB1	79	66.981	ENSDARG00000053805	trub1	76	69.608	Danio_rerio
ENSMEUG00000006603	TRUB1	78	82.381	ENSDNOG00000001069	TRUB1	57	84.577	Dasypus_novemcinctus
ENSMEUG00000006603	TRUB1	72	89.744	ENSDORG00000010431	Trub1	58	90.050	Dipodomys_ordii
ENSMEUG00000006603	TRUB1	78	86.256	ENSEASG00005014739	TRUB1	57	89.055	Equus_asinus_asinus
ENSMEUG00000006603	TRUB1	78	86.256	ENSECAG00000007177	TRUB1	57	89.055	Equus_caballus
ENSMEUG00000006603	TRUB1	77	74.038	ENSEEUG00000013993	TRUB1	56	75.622	Erinaceus_europaeus
ENSMEUG00000006603	TRUB1	75	73.762	ENSELUG00000000502	trub1	70	74.129	Esox_lucius
ENSMEUG00000006603	TRUB1	78	88.152	ENSFCAG00000031927	TRUB1	58	90.547	Felis_catus
ENSMEUG00000006603	TRUB1	64	80.814	ENSFALG00000002232	TRUB1	66	80.814	Ficedula_albicollis
ENSMEUG00000006603	TRUB1	70	86.772	ENSFDAG00000008140	TRUB1	75	89.011	Fukomys_damarensis
ENSMEUG00000006603	TRUB1	76	68.447	ENSFHEG00000004016	trub1	69	69.652	Fundulus_heteroclitus
ENSMEUG00000006603	TRUB1	76	79.412	ENSGALG00000009091	TRUB1	79	78.571	Gallus_gallus
ENSMEUG00000006603	TRUB1	80	65.741	ENSGAFG00000009193	trub1	71	68.317	Gambusia_affinis
ENSMEUG00000006603	TRUB1	56	70.861	ENSGACG00000015387	trub1	74	70.861	Gasterosteus_aculeatus
ENSMEUG00000006603	TRUB1	76	83.981	ENSGAGG00000009758	TRUB1	57	84.577	Gopherus_agassizii
ENSMEUG00000006603	TRUB1	78	87.678	ENSGGOG00000004583	TRUB1	58	90.547	Gorilla_gorilla
ENSMEUG00000006603	TRUB1	77	67.788	ENSHBUG00000016787	trub1	72	69.652	Haplochromis_burtoni
ENSMEUG00000006603	TRUB1	77	85.646	ENSHGLG00000015314	TRUB1	58	88.060	Heterocephalus_glaber_female
ENSMEUG00000006603	TRUB1	70	84.737	ENSHGLG00100009183	TRUB1	77	87.363	Heterocephalus_glaber_male
ENSMEUG00000006603	TRUB1	80	66.047	ENSHCOG00000017877	trub1	73	69.652	Hippocampus_comes
ENSMEUG00000006603	TRUB1	77	70.335	ENSIPUG00000017559	trub1	71	72.637	Ictalurus_punctatus
ENSMEUG00000006603	TRUB1	78	87.204	ENSSTOG00000003641	TRUB1	61	90.050	Ictidomys_tridecemlineatus
ENSMEUG00000006603	TRUB1	78	86.730	ENSJJAG00000011800	Trub1	59	89.552	Jaculus_jaculus
ENSMEUG00000006603	TRUB1	84	64.474	ENSKMAG00000006232	trub1	72	70.149	Kryptolebias_marmoratus
ENSMEUG00000006603	TRUB1	75	70.792	ENSLBEG00000026722	trub1	70	71.144	Labrus_bergylta
ENSMEUG00000006603	TRUB1	80	76.279	ENSLACG00000014885	TRUB1	67	79.602	Latimeria_chalumnae
ENSMEUG00000006603	TRUB1	79	72.558	ENSLOCG00000012979	trub1	68	74.627	Lepisosteus_oculatus
ENSMEUG00000006603	TRUB1	77	88.406	ENSLAFG00000015452	TRUB1	57	89.552	Loxodonta_africana
ENSMEUG00000006603	TRUB1	78	88.152	ENSMFAG00000031767	TRUB1	57	91.045	Macaca_fascicularis
ENSMEUG00000006603	TRUB1	78	88.152	ENSMMUG00000001902	TRUB1	57	91.045	Macaca_mulatta
ENSMEUG00000006603	TRUB1	78	81.043	ENSMNEG00000044646	TRUB1	56	83.582	Macaca_nemestrina
ENSMEUG00000006603	TRUB1	78	88.152	ENSMLEG00000042655	TRUB1	57	91.045	Mandrillus_leucophaeus
ENSMEUG00000006603	TRUB1	77	67.788	ENSMZEG00005024095	trub1	72	69.652	Maylandia_zebra
ENSMEUG00000006603	TRUB1	76	80.392	ENSMGAG00000011135	TRUB1	69	81.095	Meleagris_gallopavo
ENSMEUG00000006603	TRUB1	72	83.590	ENSMAUG00000011101	Trub1	59	84.080	Mesocricetus_auratus
ENSMEUG00000006603	TRUB1	78	87.678	ENSMICG00000016324	TRUB1	58	90.547	Microcebus_murinus
ENSMEUG00000006603	TRUB1	72	87.179	ENSMOCG00000017759	Trub1	61	87.562	Microtus_ochrogaster
ENSMEUG00000006603	TRUB1	74	100.000	ENSMODG00000009676	TRUB1	56	100.000	Monodelphis_domestica
ENSMEUG00000006603	TRUB1	74	88.442	MGP_CAROLIEiJ_G0023100	Trub1	75	86.022	Mus_caroli
ENSMEUG00000006603	TRUB1	74	87.437	ENSMUSG00000025086	Trub1	75	84.946	Mus_musculus
ENSMEUG00000006603	TRUB1	78	86.256	MGP_PahariEiJ_G0014588	Trub1	59	88.557	Mus_pahari
ENSMEUG00000006603	TRUB1	74	87.437	MGP_SPRETEiJ_G0024021	Trub1	75	84.946	Mus_spretus
ENSMEUG00000006603	TRUB1	78	88.626	ENSMPUG00000003556	TRUB1	57	91.542	Mustela_putorius_furo
ENSMEUG00000006603	TRUB1	91	79.675	ENSMLUG00000017686	TRUB1	59	91.045	Myotis_lucifugus
ENSMEUG00000006603	TRUB1	78	86.256	ENSNGAG00000018682	Trub1	58	89.055	Nannospalax_galili
ENSMEUG00000006603	TRUB1	79	66.509	ENSNBRG00000023393	trub1	72	69.652	Neolamprologus_brichardi
ENSMEUG00000006603	TRUB1	78	87.678	ENSNLEG00000016345	TRUB1	58	90.547	Nomascus_leucogenys
ENSMEUG00000006603	TRUB1	77	83.732	ENSOPRG00000009371	TRUB1	58	85.572	Ochotona_princeps
ENSMEUG00000006603	TRUB1	77	84.135	ENSODEG00000010854	TRUB1	58	85.572	Octodon_degus
ENSMEUG00000006603	TRUB1	77	67.308	ENSONIG00000007249	trub1	73	69.154	Oreochromis_niloticus
ENSMEUG00000006603	TRUB1	76	88.835	ENSOANG00000001556	TRUB1	66	89.552	Ornithorhynchus_anatinus
ENSMEUG00000006603	TRUB1	78	85.308	ENSOCUG00000009456	TRUB1	58	87.562	Oryctolagus_cuniculus
ENSMEUG00000006603	TRUB1	75	70.792	ENSORLG00000029719	trub1	72	71.144	Oryzias_latipes
ENSMEUG00000006603	TRUB1	75	70.297	ENSORLG00020016767	trub1	71	70.647	Oryzias_latipes_hni
ENSMEUG00000006603	TRUB1	75	70.297	ENSORLG00015014728	trub1	72	70.647	Oryzias_latipes_hsok
ENSMEUG00000006603	TRUB1	79	68.182	ENSOMEG00000014556	trub1	71	70.647	Oryzias_melastigma
ENSMEUG00000006603	TRUB1	78	88.152	ENSOGAG00000015895	TRUB1	57	91.045	Otolemur_garnettii
ENSMEUG00000006603	TRUB1	77	85.047	ENSOARG00000015591	TRUB1	59	87.379	Ovis_aries
ENSMEUG00000006603	TRUB1	78	87.678	ENSPPAG00000043645	TRUB1	58	90.547	Pan_paniscus
ENSMEUG00000006603	TRUB1	78	87.204	ENSPPRG00000007096	TRUB1	58	89.552	Panthera_pardus
ENSMEUG00000006603	TRUB1	78	87.678	ENSPTIG00000006378	TRUB1	58	90.050	Panthera_tigris_altaica
ENSMEUG00000006603	TRUB1	78	87.678	ENSPTRG00000002964	TRUB1	58	90.547	Pan_troglodytes
ENSMEUG00000006603	TRUB1	78	88.152	ENSPANG00000020712	TRUB1	57	91.045	Papio_anubis
ENSMEUG00000006603	TRUB1	76	83.010	ENSPSIG00000012877	TRUB1	69	83.582	Pelodiscus_sinensis
ENSMEUG00000006603	TRUB1	78	64.455	ENSPMGG00000000075	trub1	73	66.667	Periophthalmus_magnuspinnatus
ENSMEUG00000006603	TRUB1	78	83.412	ENSPEMG00000011156	Trub1	59	85.572	Peromyscus_maniculatus_bairdii
ENSMEUG00000006603	TRUB1	74	100.000	ENSPCIG00000009729	TRUB1	76	91.103	Phascolarctos_cinereus
ENSMEUG00000006603	TRUB1	80	67.442	ENSPFOG00000009950	trub1	74	70.149	Poecilia_formosa
ENSMEUG00000006603	TRUB1	83	65.333	ENSPLAG00000013855	trub1	71	70.149	Poecilia_latipinna
ENSMEUG00000006603	TRUB1	80	67.442	ENSPMEG00000009064	trub1	73	70.149	Poecilia_mexicana
ENSMEUG00000006603	TRUB1	77	68.900	ENSPREG00000003343	trub1	73	70.647	Poecilia_reticulata
ENSMEUG00000006603	TRUB1	78	87.204	ENSPPYG00000002676	TRUB1	58	90.050	Pongo_abelii
ENSMEUG00000006603	TRUB1	71	86.458	ENSPCAG00000008427	TRUB1	52	88.462	Procavia_capensis
ENSMEUG00000006603	TRUB1	78	79.147	ENSPCOG00000024360	TRUB1	55	81.592	Propithecus_coquereli
ENSMEUG00000006603	TRUB1	78	87.678	ENSPVAG00000007575	TRUB1	76	90.547	Pteropus_vampyrus
ENSMEUG00000006603	TRUB1	77	67.788	ENSPNYG00000018614	trub1	72	69.652	Pundamilia_nyererei
ENSMEUG00000006603	TRUB1	77	58.373	ENSPNAG00000006881	trub1	62	60.199	Pygocentrus_nattereri
ENSMEUG00000006603	TRUB1	78	85.308	ENSRNOG00000017321	Trub1	59	87.562	Rattus_norvegicus
ENSMEUG00000006603	TRUB1	78	72.986	ENSRBIG00000033423	TRUB1	54	75.124	Rhinopithecus_bieti
ENSMEUG00000006603	TRUB1	78	88.152	ENSRROG00000033902	TRUB1	57	91.045	Rhinopithecus_roxellana
ENSMEUG00000006603	TRUB1	78	88.152	ENSSBOG00000024237	TRUB1	57	91.045	Saimiri_boliviensis_boliviensis
ENSMEUG00000006603	TRUB1	63	100.000	ENSSHAG00000009346	TRUB1	57	100.000	Sarcophilus_harrisii
ENSMEUG00000006603	TRUB1	79	69.811	ENSSFOG00015022124	trub1	69	72.139	Scleropages_formosus
ENSMEUG00000006603	TRUB1	79	67.453	ENSSMAG00000001020	trub1	72	70.647	Scophthalmus_maximus
ENSMEUG00000006603	TRUB1	73	70.918	ENSSDUG00000016414	trub1	72	71.144	Seriola_dumerili
ENSMEUG00000006603	TRUB1	73	71.429	ENSSLDG00000015486	trub1	72	71.642	Seriola_lalandi_dorsalis
ENSMEUG00000006603	TRUB1	77	81.340	ENSSPUG00000001642	TRUB1	69	83.085	Sphenodon_punctatus
ENSMEUG00000006603	TRUB1	76	68.932	ENSSPAG00000001217	trub1	72	70.647	Stegastes_partitus
ENSMEUG00000006603	TRUB1	78	85.308	ENSSSCG00000010653	TRUB1	59	88.557	Sus_scrofa
ENSMEUG00000006603	TRUB1	74	80.597	ENSTGUG00000010971	TRUB1	71	80.597	Taeniopygia_guttata
ENSMEUG00000006603	TRUB1	62	71.429	ENSTBEG00000002880	TRUB1	66	71.429	Tupaia_belangeri
ENSMEUG00000006603	TRUB1	78	88.152	ENSTTRG00000005767	TRUB1	77	91.045	Tursiops_truncatus
ENSMEUG00000006603	TRUB1	78	88.626	ENSUAMG00000024876	TRUB1	57	91.542	Ursus_americanus
ENSMEUG00000006603	TRUB1	77	88.995	ENSUMAG00000002411	TRUB1	77	84.694	Ursus_maritimus
ENSMEUG00000006603	TRUB1	78	88.152	ENSVPAG00000005507	TRUB1	58	91.045	Vicugna_pacos
ENSMEUG00000006603	TRUB1	76	70.588	ENSXETG00000023828	trub1	72	71.144	Xenopus_tropicalis
ENSMEUG00000006603	TRUB1	80	66.977	ENSXCOG00000017847	trub1	71	69.652	Xiphophorus_couchianus
ENSMEUG00000006603	TRUB1	80	66.977	ENSXMAG00000014701	trub1	73	69.652	Xiphophorus_maculatus