EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000006778 (Gene tree)
Gene ID: -
Gene Symbol: POLR1C
Alias: RPA39|RPA40|RPA5|RPAC1
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Plus strand
Length: 3848 bases
Position: chrGeneScaffold_4713:6797-10644
Accession: 20194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000006186	RNA_pol_A_bac	PF01000.26	5.4e-25	1	1
ENSMEUP00000006186	RNA_pol_L	PF01193.24	9.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000006797	POLR1C-201	1041	-	ENSMEUP00000006186	346 (aa)	-	UPI0001B2186A

Gene Model

Click here to download ENSMEUG00000006778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000006778's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000006778	POLR1C	100	78.902	ENSG00000171453	POLR1C	100	92.742	Homo_sapiens
ENSMEUG00000006778	POLR1C	100	62.393	ENSAPOG00000024356	polr1c	100	62.678	Acanthochromis_polyacanthus
ENSMEUG00000006778	POLR1C	100	76.301	ENSAMEG00000012205	POLR1C	99	76.301	Ailuropoda_melanoleuca
ENSMEUG00000006778	POLR1C	95	51.662	ENSACIG00000016268	polr1c	91	51.964	Amphilophus_citrinellus
ENSMEUG00000006778	POLR1C	100	62.108	ENSAOCG00000011687	polr1c	97	62.393	Amphiprion_ocellaris
ENSMEUG00000006778	POLR1C	100	62.108	ENSAPEG00000002433	polr1c	100	62.393	Amphiprion_percula
ENSMEUG00000006778	POLR1C	99	64.431	ENSATEG00000005985	polr1c	99	64.431	Anabas_testudineus
ENSMEUG00000006778	POLR1C	87	69.333	ENSAPLG00000002908	POLR1C	100	69.333	Anas_platyrhynchos
ENSMEUG00000006778	POLR1C	89	69.707	ENSACAG00000009764	POLR1C	88	69.707	Anolis_carolinensis
ENSMEUG00000006778	POLR1C	100	78.613	ENSANAG00000025805	POLR1C	100	78.613	Aotus_nancymaae
ENSMEUG00000006778	POLR1C	98	63.824	ENSACLG00000006573	polr1c	98	63.824	Astatotilapia_calliptera
ENSMEUG00000006778	POLR1C	98	63.824	ENSAMXG00000012062	polr1c	98	63.824	Astyanax_mexicanus
ENSMEUG00000006778	POLR1C	100	76.590	ENSBTAG00000018969	POLR1C	100	76.590	Bos_taurus
ENSMEUG00000006778	POLR1C	97	36.827	WBGene00019275	rpac-40	94	36.827	Caenorhabditis_elegans
ENSMEUG00000006778	POLR1C	100	78.324	ENSCJAG00000005594	POLR1C	100	78.324	Callithrix_jacchus
ENSMEUG00000006778	POLR1C	100	76.879	ENSCAFG00000001872	POLR1C	100	76.879	Canis_familiaris
ENSMEUG00000006778	POLR1C	100	76.879	ENSCAFG00020012018	POLR1C	100	76.879	Canis_lupus_dingo
ENSMEUG00000006778	POLR1C	50	30.337	ENSCAFG00020007660	POLR2C	58	31.579	Canis_lupus_dingo
ENSMEUG00000006778	POLR1C	100	76.945	ENSCHIG00000004352	POLR1C	100	76.945	Capra_hircus
ENSMEUG00000006778	POLR1C	100	78.035	ENSTSYG00000011921	POLR1C	100	78.035	Carlito_syrichta
ENSMEUG00000006778	POLR1C	86	75.503	ENSCAPG00000015364	POLR1C	87	75.503	Cavia_aperea
ENSMEUG00000006778	POLR1C	100	77.746	ENSCPOG00000038098	POLR1C	100	77.746	Cavia_porcellus
ENSMEUG00000006778	POLR1C	100	78.324	ENSCCAG00000020169	POLR1C	100	78.324	Cebus_capucinus
ENSMEUG00000006778	POLR1C	100	79.191	ENSCATG00000044045	POLR1C	100	79.191	Cercocebus_atys
ENSMEUG00000006778	POLR1C	100	77.457	ENSCLAG00000009266	POLR1C	100	77.457	Chinchilla_lanigera
ENSMEUG00000006778	POLR1C	50	30.337	ENSCLAG00000013676	POLR2C	58	31.579	Chinchilla_lanigera
ENSMEUG00000006778	POLR1C	100	78.902	ENSCSAG00000011913	POLR1C	100	78.902	Chlorocebus_sabaeus
ENSMEUG00000006778	POLR1C	61	66.981	ENSCHOG00000006601	POLR1C	100	66.981	Choloepus_hoffmanni
ENSMEUG00000006778	POLR1C	100	73.988	ENSCPBG00000025203	POLR1C	100	73.988	Chrysemys_picta_bellii
ENSMEUG00000006778	POLR1C	84	55.556	ENSCING00000003563	-	83	55.556	Ciona_intestinalis
ENSMEUG00000006778	POLR1C	50	31.844	ENSCING00000021895	-	59	31.844	Ciona_intestinalis
ENSMEUG00000006778	POLR1C	100	78.613	ENSCANG00000043167	POLR1C	100	78.613	Colobus_angolensis_palliatus
ENSMEUG00000006778	POLR1C	100	75.434	ENSCGRG00001017533	Polr1c	100	75.434	Cricetulus_griseus_chok1gshd
ENSMEUG00000006778	POLR1C	86	73.490	ENSCGRG00000013225	Polr1c	99	73.490	Cricetulus_griseus_crigri
ENSMEUG00000006778	POLR1C	100	60.807	ENSCSEG00000018097	polr1c	100	60.807	Cynoglossus_semilaevis
ENSMEUG00000006778	POLR1C	61	53.302	ENSCVAG00000005684	polr1c	88	52.511	Cyprinodon_variegatus
ENSMEUG00000006778	POLR1C	99	60.580	ENSDARG00000039400	polr1c	90	71.348	Danio_rerio
ENSMEUG00000006778	POLR1C	50	30.508	ENSDARG00000033596	polr2c	60	30.508	Danio_rerio
ENSMEUG00000006778	POLR1C	100	77.457	ENSDNOG00000042693	POLR1C	100	77.457	Dasypus_novemcinctus
ENSMEUG00000006778	POLR1C	100	76.879	ENSDORG00000000429	Polr1c	100	76.879	Dipodomys_ordii
ENSMEUG00000006778	POLR1C	75	54.211	FBgn0031657	CG3756	79	54.211	Drosophila_melanogaster
ENSMEUG00000006778	POLR1C	100	73.410	ENSETEG00000010807	POLR1C	100	73.410	Echinops_telfairi
ENSMEUG00000006778	POLR1C	99	61.696	ENSEBUG00000013725	polr1c	98	61.696	Eptatretus_burgeri
ENSMEUG00000006778	POLR1C	100	76.879	ENSEASG00005003338	POLR1C	100	76.879	Equus_asinus_asinus
ENSMEUG00000006778	POLR1C	100	76.879	ENSECAG00000023516	POLR1C	100	76.879	Equus_caballus
ENSMEUG00000006778	POLR1C	100	78.324	ENSEEUG00000005471	POLR1C	100	78.324	Erinaceus_europaeus
ENSMEUG00000006778	POLR1C	100	63.112	ENSELUG00000013027	polr1c	100	63.112	Esox_lucius
ENSMEUG00000006778	POLR1C	100	77.168	ENSFCAG00000009735	POLR1C	100	77.168	Felis_catus
ENSMEUG00000006778	POLR1C	93	70.279	ENSFALG00000012111	POLR1C	100	70.279	Ficedula_albicollis
ENSMEUG00000006778	POLR1C	100	77.457	ENSFDAG00000008428	POLR1C	100	77.457	Fukomys_damarensis
ENSMEUG00000006778	POLR1C	99	62.609	ENSFHEG00000000262	polr1c	99	62.609	Fundulus_heteroclitus
ENSMEUG00000006778	POLR1C	93	62.037	ENSGMOG00000013878	polr1c	100	62.037	Gadus_morhua
ENSMEUG00000006778	POLR1C	100	71.098	ENSGALG00000010349	POLR1C	100	71.098	Gallus_gallus
ENSMEUG00000006778	POLR1C	99	61.605	ENSGAFG00000010153	polr1c	99	61.605	Gambusia_affinis
ENSMEUG00000006778	POLR1C	98	60.756	ENSGACG00000002453	polr1c	98	61.047	Gasterosteus_aculeatus
ENSMEUG00000006778	POLR1C	100	73.410	ENSGAGG00000010640	POLR1C	100	73.410	Gopherus_agassizii
ENSMEUG00000006778	POLR1C	100	78.902	ENSGGOG00000010903	POLR1C	100	78.902	Gorilla_gorilla
ENSMEUG00000006778	POLR1C	98	56.176	ENSHBUG00000017816	polr1c	98	56.176	Haplochromis_burtoni
ENSMEUG00000006778	POLR1C	100	76.590	ENSHGLG00000019441	POLR1C	100	76.590	Heterocephalus_glaber_female
ENSMEUG00000006778	POLR1C	100	76.590	ENSHGLG00100005970	POLR1C	100	76.590	Heterocephalus_glaber_male
ENSMEUG00000006778	POLR1C	99	58.382	ENSHCOG00000002179	polr1c	99	58.382	Hippocampus_comes
ENSMEUG00000006778	POLR1C	98	63.314	ENSIPUG00000024464	polr1c	97	63.314	Ictalurus_punctatus
ENSMEUG00000006778	POLR1C	50	30.508	ENSIPUG00000009231	polr2c	58	31.579	Ictalurus_punctatus
ENSMEUG00000006778	POLR1C	50	30.337	ENSSTOG00000015150	-	58	31.579	Ictidomys_tridecemlineatus
ENSMEUG00000006778	POLR1C	100	78.324	ENSSTOG00000010631	POLR1C	100	78.324	Ictidomys_tridecemlineatus
ENSMEUG00000006778	POLR1C	100	78.613	ENSJJAG00000023110	Polr1c	100	78.613	Jaculus_jaculus
ENSMEUG00000006778	POLR1C	99	63.478	ENSKMAG00000014305	polr1c	99	63.478	Kryptolebias_marmoratus
ENSMEUG00000006778	POLR1C	100	62.108	ENSLBEG00000014925	polr1c	100	62.393	Labrus_bergylta
ENSMEUG00000006778	POLR1C	95	59.215	ENSLACG00000012567	POLR1C	98	59.215	Latimeria_chalumnae
ENSMEUG00000006778	POLR1C	99	63.768	ENSLOCG00000016710	polr1c	95	63.768	Lepisosteus_oculatus
ENSMEUG00000006778	POLR1C	87	74.751	ENSLAFG00000026248	POLR1C	100	74.751	Loxodonta_africana
ENSMEUG00000006778	POLR1C	100	78.902	ENSMFAG00000046295	POLR1C	100	78.902	Macaca_fascicularis
ENSMEUG00000006778	POLR1C	100	78.902	ENSMMUG00000015192	POLR1C	100	78.902	Macaca_mulatta
ENSMEUG00000006778	POLR1C	100	78.902	ENSMNEG00000028073	POLR1C	100	78.902	Macaca_nemestrina
ENSMEUG00000006778	POLR1C	100	78.902	ENSMLEG00000034818	POLR1C	100	78.902	Mandrillus_leucophaeus
ENSMEUG00000006778	POLR1C	100	62.248	ENSMAMG00000008700	polr1c	100	62.248	Mastacembelus_armatus
ENSMEUG00000006778	POLR1C	98	63.529	ENSMZEG00005018545	polr1c	98	63.529	Maylandia_zebra
ENSMEUG00000006778	POLR1C	84	65.292	ENSMGAG00000011020	POLR1C	100	65.292	Meleagris_gallopavo
ENSMEUG00000006778	POLR1C	100	76.012	ENSMAUG00000014329	Polr1c	100	76.012	Mesocricetus_auratus
ENSMEUG00000006778	POLR1C	100	77.457	ENSMICG00000005027	POLR1C	100	77.457	Microcebus_murinus
ENSMEUG00000006778	POLR1C	100	76.012	ENSMOCG00000017549	Polr1c	100	76.012	Microtus_ochrogaster
ENSMEUG00000006778	POLR1C	99	59.827	ENSMMOG00000005380	polr1c	99	59.827	Mola_mola
ENSMEUG00000006778	POLR1C	84	81.100	ENSMODG00000018964	POLR1C	100	81.100	Monodelphis_domestica
ENSMEUG00000006778	POLR1C	99	62.899	ENSMALG00000011711	polr1c	99	62.899	Monopterus_albus
ENSMEUG00000006778	POLR1C	100	66.763	MGP_CAROLIEiJ_G0021662	Polr1c	100	74.272	Mus_caroli
ENSMEUG00000006778	POLR1C	50	30.899	ENSMUSG00000031783	Polr2c	58	32.164	Mus_musculus
ENSMEUG00000006778	POLR1C	100	76.301	ENSMUSG00000067148	Polr1c	99	89.216	Mus_musculus
ENSMEUG00000006778	POLR1C	100	76.301	MGP_PahariEiJ_G0020654	Polr1c	99	90.196	Mus_pahari
ENSMEUG00000006778	POLR1C	100	76.301	MGP_SPRETEiJ_G0022574	Polr1c	99	89.216	Mus_spretus
ENSMEUG00000006778	POLR1C	100	77.746	ENSMPUG00000012916	POLR1C	91	77.746	Mustela_putorius_furo
ENSMEUG00000006778	POLR1C	100	77.746	ENSMLUG00000017751	POLR1C	99	77.746	Myotis_lucifugus
ENSMEUG00000006778	POLR1C	100	76.879	ENSNGAG00000023487	Polr1c	100	76.879	Nannospalax_galili
ENSMEUG00000006778	POLR1C	100	63.401	ENSNBRG00000018742	polr1c	100	63.401	Neolamprologus_brichardi
ENSMEUG00000006778	POLR1C	100	78.613	ENSNLEG00000004035	POLR1C	100	78.613	Nomascus_leucogenys
ENSMEUG00000006778	POLR1C	63	88.073	ENSOPRG00000000145	POLR1C	81	88.073	Ochotona_princeps
ENSMEUG00000006778	POLR1C	63	67.123	ENSODEG00000017109	-	100	67.123	Octodon_degus
ENSMEUG00000006778	POLR1C	100	76.301	ENSODEG00000015831	-	100	76.301	Octodon_degus
ENSMEUG00000006778	POLR1C	100	62.963	ENSONIG00000013133	polr1c	98	63.248	Oreochromis_niloticus
ENSMEUG00000006778	POLR1C	100	75.723	ENSOANG00000003043	POLR1C	100	75.723	Ornithorhynchus_anatinus
ENSMEUG00000006778	POLR1C	100	78.324	ENSOCUG00000005504	POLR1C	99	78.324	Oryctolagus_cuniculus
ENSMEUG00000006778	POLR1C	99	60.231	ENSORLG00000019743	polr1c	99	60.231	Oryzias_latipes
ENSMEUG00000006778	POLR1C	99	60.807	ENSORLG00020006489	POLR1C	99	60.807	Oryzias_latipes_hni
ENSMEUG00000006778	POLR1C	76	41.241	ENSORLG00020005555	polr1c	81	41.241	Oryzias_latipes_hni
ENSMEUG00000006778	POLR1C	99	60.519	ENSORLG00015013322	polr1c	99	60.519	Oryzias_latipes_hsok
ENSMEUG00000006778	POLR1C	98	60.933	ENSOMEG00000016527	polr1c	91	69.492	Oryzias_melastigma
ENSMEUG00000006778	POLR1C	100	75.862	ENSOGAG00000016318	POLR1C	100	75.862	Otolemur_garnettii
ENSMEUG00000006778	POLR1C	100	77.168	ENSOARG00000007503	POLR1C	100	77.168	Ovis_aries
ENSMEUG00000006778	POLR1C	100	78.902	ENSPPAG00000043678	POLR1C	100	78.902	Pan_paniscus
ENSMEUG00000006778	POLR1C	100	77.457	ENSPPRG00000009760	POLR1C	100	77.457	Panthera_pardus
ENSMEUG00000006778	POLR1C	100	77.457	ENSPTIG00000014813	POLR1C	100	77.457	Panthera_tigris_altaica
ENSMEUG00000006778	POLR1C	100	78.902	ENSPTRG00000018202	POLR1C	100	78.902	Pan_troglodytes
ENSMEUG00000006778	POLR1C	100	79.191	ENSPANG00000009025	POLR1C	100	79.191	Papio_anubis
ENSMEUG00000006778	POLR1C	100	62.536	ENSPKIG00000009858	polr1c	100	62.536	Paramormyrops_kingsleyae
ENSMEUG00000006778	POLR1C	100	72.543	ENSPSIG00000012580	POLR1C	94	72.543	Pelodiscus_sinensis
ENSMEUG00000006778	POLR1C	99	62.029	ENSPMGG00000012121	polr1c	99	62.029	Periophthalmus_magnuspinnatus
ENSMEUG00000006778	POLR1C	100	75.723	ENSPEMG00000006970	Polr1c	100	75.723	Peromyscus_maniculatus_bairdii
ENSMEUG00000006778	POLR1C	84	76.887	ENSPMAG00000005560	polr1c	83	76.887	Petromyzon_marinus
ENSMEUG00000006778	POLR1C	100	83.526	ENSPCIG00000028137	POLR1C	100	83.526	Phascolarctos_cinereus
ENSMEUG00000006778	POLR1C	99	62.178	ENSPFOG00000014342	POLR1C	99	62.178	Poecilia_formosa
ENSMEUG00000006778	POLR1C	99	62.178	ENSPFOG00000014357	polr1c	98	62.178	Poecilia_formosa
ENSMEUG00000006778	POLR1C	69	50.628	ENSPLAG00000004111	polr1c	99	50.628	Poecilia_latipinna
ENSMEUG00000006778	POLR1C	99	62.609	ENSPMEG00000011877	-	99	62.609	Poecilia_mexicana
ENSMEUG00000006778	POLR1C	99	62.609	ENSPMEG00000008420	polr1c	99	62.609	Poecilia_mexicana
ENSMEUG00000006778	POLR1C	99	63.188	ENSPREG00000007985	polr1c	99	63.188	Poecilia_reticulata
ENSMEUG00000006778	POLR1C	100	78.613	ENSPPYG00000016645	POLR1C	100	78.613	Pongo_abelii
ENSMEUG00000006778	POLR1C	100	76.590	ENSPCOG00000024628	POLR1C	100	76.590	Propithecus_coquereli
ENSMEUG00000006778	POLR1C	100	69.364	ENSPVAG00000005689	POLR1C	100	69.364	Pteropus_vampyrus
ENSMEUG00000006778	POLR1C	98	62.791	ENSPNYG00000003620	polr1c	98	63.081	Pundamilia_nyererei
ENSMEUG00000006778	POLR1C	98	63.824	ENSPNAG00000008443	polr1c	98	63.824	Pygocentrus_nattereri
ENSMEUG00000006778	POLR1C	100	76.301	ENSRNOG00000019079	Polr1c	100	76.301	Rattus_norvegicus
ENSMEUG00000006778	POLR1C	100	78.613	ENSRBIG00000007155	POLR1C	100	78.613	Rhinopithecus_bieti
ENSMEUG00000006778	POLR1C	100	78.902	ENSRROG00000000257	POLR1C	100	78.902	Rhinopithecus_roxellana
ENSMEUG00000006778	POLR1C	77	44.076	YPR110C	RPC40	81	44.076	Saccharomyces_cerevisiae
ENSMEUG00000006778	POLR1C	100	78.613	ENSSBOG00000025735	POLR1C	100	78.613	Saimiri_boliviensis_boliviensis
ENSMEUG00000006778	POLR1C	100	74.566	ENSSHAG00000014456	POLR1C	100	74.566	Sarcophilus_harrisii
ENSMEUG00000006778	POLR1C	98	64.118	ENSSFOG00015019860	polr1c	98	64.118	Scleropages_formosus
ENSMEUG00000006778	POLR1C	99	62.319	ENSSMAG00000018865	polr1c	99	62.319	Scophthalmus_maximus
ENSMEUG00000006778	POLR1C	100	62.824	ENSSDUG00000015745	polr1c	100	62.824	Seriola_dumerili
ENSMEUG00000006778	POLR1C	100	62.536	ENSSLDG00000018285	polr1c	100	62.536	Seriola_lalandi_dorsalis
ENSMEUG00000006778	POLR1C	99	68.023	ENSSPUG00000011822	POLR1C	99	68.023	Sphenodon_punctatus
ENSMEUG00000006778	POLR1C	100	62.393	ENSSPAG00000022369	polr1c	100	62.678	Stegastes_partitus
ENSMEUG00000006778	POLR1C	100	77.168	ENSSSCG00000028007	POLR1C	99	77.168	Sus_scrofa
ENSMEUG00000006778	POLR1C	97	70.746	ENSTGUG00000009159	POLR1C	99	70.746	Taeniopygia_guttata
ENSMEUG00000006778	POLR1C	99	60.057	ENSTRUG00000006264	polr1c	99	60.057	Takifugu_rubripes
ENSMEUG00000006778	POLR1C	51	64.607	ENSTBEG00000002254	POLR1C	100	64.607	Tupaia_belangeri
ENSMEUG00000006778	POLR1C	76	72.624	ENSTTRG00000006344	POLR1C	76	72.624	Tursiops_truncatus
ENSMEUG00000006778	POLR1C	100	76.590	ENSUAMG00000025602	POLR1C	100	76.590	Ursus_americanus
ENSMEUG00000006778	POLR1C	100	76.590	ENSUMAG00000005938	POLR1C	100	76.590	Ursus_maritimus
ENSMEUG00000006778	POLR1C	100	76.879	ENSVVUG00000028922	POLR1C	100	76.879	Vulpes_vulpes
ENSMEUG00000006778	POLR1C	100	65.130	ENSXETG00000010882	polr1c	100	65.130	Xenopus_tropicalis
ENSMEUG00000006778	POLR1C	99	62.428	ENSXCOG00000014185	polr1c	99	62.428	Xiphophorus_couchianus
ENSMEUG00000006778	POLR1C	99	62.178	ENSXMAG00000015076	polr1c	99	62.178	Xiphophorus_maculatus