EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000006955 (Gene tree)
Gene ID: -
Gene Symbol: CPSF4
Alias: CPSF30|NAR
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Plus strand
Length: 18090 bases
Position: chrGeneScaffold_2176:27078-45167
Accession: 2327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000006339	zf-CCCH	PF00642.24	1.7e-20	1	2
ENSMEUP00000006339	zf-CCCH	PF00642.24	1.7e-20	2	2
ENSMEUP00000006339	zf-CCHC	PF00098.23	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000006968	CPSF4-201	810	-	ENSMEUP00000006339	269 (aa)	-	UPI00005E9928

Gene Model

Click here to download ENSMEUG00000006955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000006955's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000006955	CPSF4	100	97.770	ENSG00000160917	CPSF4	100	100.000	Homo_sapiens
ENSMEUG00000006955	CPSF4	67	75.275	ENSAPOG00000004921	cpsf4	100	75.275	Acanthochromis_polyacanthus
ENSMEUG00000006955	CPSF4	100	97.026	ENSAMEG00000006252	CPSF4	100	97.026	Ailuropoda_melanoleuca
ENSMEUG00000006955	CPSF4	100	80.669	ENSACIG00000009248	cpsf4	100	80.669	Amphilophus_citrinellus
ENSMEUG00000006955	CPSF4	100	85.926	ENSAOCG00000019616	cpsf4	100	85.926	Amphiprion_ocellaris
ENSMEUG00000006955	CPSF4	100	85.926	ENSAPEG00000011679	cpsf4	100	85.926	Amphiprion_percula
ENSMEUG00000006955	CPSF4	100	84.559	ENSATEG00000007010	cpsf4	100	84.559	Anabas_testudineus
ENSMEUG00000006955	CPSF4	100	94.796	ENSACAG00000012941	CPSF4	89	94.796	Anolis_carolinensis
ENSMEUG00000006955	CPSF4	100	97.770	ENSANAG00000021360	CPSF4	100	97.770	Aotus_nancymaae
ENSMEUG00000006955	CPSF4	100	85.185	ENSACLG00000010374	cpsf4	100	85.185	Astatotilapia_calliptera
ENSMEUG00000006955	CPSF4	100	85.609	ENSAMXG00000031647	cpsf4	100	86.716	Astyanax_mexicanus
ENSMEUG00000006955	CPSF4	100	87.732	ENSBTAG00000002090	CPSF4	100	87.732	Bos_taurus
ENSMEUG00000006955	CPSF4	100	97.770	ENSCJAG00000015826	CPSF4	100	97.770	Callithrix_jacchus
ENSMEUG00000006955	CPSF4	100	97.026	ENSCAFG00000015036	CPSF4	100	97.026	Canis_familiaris
ENSMEUG00000006955	CPSF4	100	90.706	ENSCAFG00020014462	CPSF4	100	90.706	Canis_lupus_dingo
ENSMEUG00000006955	CPSF4	100	97.026	ENSCHIG00000014313	CPSF4	100	97.026	Capra_hircus
ENSMEUG00000006955	CPSF4	89	80.913	ENSTSYG00000008195	-	99	78.400	Carlito_syrichta
ENSMEUG00000006955	CPSF4	100	80.741	ENSTSYG00000014604	-	100	78.519	Carlito_syrichta
ENSMEUG00000006955	CPSF4	100	88.848	ENSTSYG00000005712	-	100	88.848	Carlito_syrichta
ENSMEUG00000006955	CPSF4	81	96.789	ENSCAPG00000013881	CPSF4	87	96.789	Cavia_aperea
ENSMEUG00000006955	CPSF4	100	88.104	ENSCPOG00000001783	CPSF4	100	88.104	Cavia_porcellus
ENSMEUG00000006955	CPSF4	100	97.770	ENSCCAG00000028291	CPSF4	100	97.770	Cebus_capucinus
ENSMEUG00000006955	CPSF4	100	97.770	ENSCATG00000038440	CPSF4	100	97.770	Cercocebus_atys
ENSMEUG00000006955	CPSF4	100	97.026	ENSCLAG00000007050	CPSF4	100	97.026	Chinchilla_lanigera
ENSMEUG00000006955	CPSF4	100	97.770	ENSCSAG00000017795	CPSF4	100	97.770	Chlorocebus_sabaeus
ENSMEUG00000006955	CPSF4	80	98.148	ENSCPBG00000020869	CPSF4	100	98.148	Chrysemys_picta_bellii
ENSMEUG00000006955	CPSF4	61	81.818	ENSCPBG00000010269	-	100	81.325	Chrysemys_picta_bellii
ENSMEUG00000006955	CPSF4	97	56.322	ENSCING00000021080	-	97	56.322	Ciona_intestinalis
ENSMEUG00000006955	CPSF4	96	54.417	ENSCSAVG00000011469	-	97	53.737	Ciona_savignyi
ENSMEUG00000006955	CPSF4	100	97.770	ENSCANG00000019384	CPSF4	100	97.770	Colobus_angolensis_palliatus
ENSMEUG00000006955	CPSF4	100	88.104	ENSCGRG00001024184	Cpsf4	100	88.104	Cricetulus_griseus_chok1gshd
ENSMEUG00000006955	CPSF4	100	97.026	ENSCGRG00000013892	Cpsf4	100	97.026	Cricetulus_griseus_crigri
ENSMEUG00000006955	CPSF4	100	84.815	ENSCSEG00000019055	cpsf4	100	84.815	Cynoglossus_semilaevis
ENSMEUG00000006955	CPSF4	100	84.444	ENSCVAG00000016528	cpsf4	100	84.444	Cyprinodon_variegatus
ENSMEUG00000006955	CPSF4	100	85.978	ENSDARG00000020217	cpsf4	100	85.978	Danio_rerio
ENSMEUG00000006955	CPSF4	100	97.398	ENSDNOG00000006344	CPSF4	100	97.398	Dasypus_novemcinctus
ENSMEUG00000006955	CPSF4	81	96.313	ENSDORG00000000742	Cpsf4	100	96.313	Dipodomys_ordii
ENSMEUG00000006955	CPSF4	100	54.795	FBgn0015621	Clp	99	53.767	Drosophila_melanogaster
ENSMEUG00000006955	CPSF4	70	100.000	ENSETEG00000002608	CPSF4	70	100.000	Echinops_telfairi
ENSMEUG00000006955	CPSF4	99	65.169	ENSEBUG00000012552	cpsf4	98	65.169	Eptatretus_burgeri
ENSMEUG00000006955	CPSF4	100	88.104	ENSEASG00005002487	CPSF4	100	88.104	Equus_asinus_asinus
ENSMEUG00000006955	CPSF4	100	97.026	ENSECAG00000007525	CPSF4	100	97.026	Equus_caballus
ENSMEUG00000006955	CPSF4	63	100.000	ENSEEUG00000002158	CPSF4	73	100.000	Erinaceus_europaeus
ENSMEUG00000006955	CPSF4	100	83.212	ENSELUG00000011481	cpsf4	100	83.212	Esox_lucius
ENSMEUG00000006955	CPSF4	100	97.026	ENSFCAG00000015070	CPSF4	100	97.026	Felis_catus
ENSMEUG00000006955	CPSF4	100	87.732	ENSFALG00000013799	CPSF4	100	85.874	Ficedula_albicollis
ENSMEUG00000006955	CPSF4	61	57.558	ENSFALG00000012906	-	100	57.558	Ficedula_albicollis
ENSMEUG00000006955	CPSF4	90	96.296	ENSFDAG00000014092	CPSF4	100	96.296	Fukomys_damarensis
ENSMEUG00000006955	CPSF4	100	83.333	ENSFHEG00000010880	cpsf4	100	83.333	Fundulus_heteroclitus
ENSMEUG00000006955	CPSF4	100	78.598	ENSGMOG00000002330	cpsf4	100	76.277	Gadus_morhua
ENSMEUG00000006955	CPSF4	99	38.947	ENSGALG00000004441	-	92	37.368	Gallus_gallus
ENSMEUG00000006955	CPSF4	100	87.732	ENSGALG00000004714	CPSF4	100	86.245	Gallus_gallus
ENSMEUG00000006955	CPSF4	100	82.963	ENSGAFG00000010580	cpsf4	100	82.963	Gambusia_affinis
ENSMEUG00000006955	CPSF4	100	77.491	ENSGACG00000007792	cpsf4	100	76.384	Gasterosteus_aculeatus
ENSMEUG00000006955	CPSF4	100	98.141	ENSGAGG00000021835	CPSF4	100	98.141	Gopherus_agassizii
ENSMEUG00000006955	CPSF4	68	77.473	ENSGAGG00000020579	-	92	81.818	Gopherus_agassizii
ENSMEUG00000006955	CPSF4	100	97.770	ENSGGOG00000015131	CPSF4	100	97.770	Gorilla_gorilla
ENSMEUG00000006955	CPSF4	100	85.185	ENSHBUG00000013699	cpsf4	100	85.185	Haplochromis_burtoni
ENSMEUG00000006955	CPSF4	100	95.203	ENSHGLG00000017150	CPSF4	100	95.203	Heterocephalus_glaber_female
ENSMEUG00000006955	CPSF4	87	93.220	ENSHGLG00100009215	-	100	93.220	Heterocephalus_glaber_male
ENSMEUG00000006955	CPSF4	78	65.550	ENSHGLG00100017302	-	100	53.532	Heterocephalus_glaber_male
ENSMEUG00000006955	CPSF4	100	81.481	ENSHCOG00000004397	cpsf4	100	81.481	Hippocampus_comes
ENSMEUG00000006955	CPSF4	100	84.871	ENSIPUG00000017147	cpsf4	100	84.871	Ictalurus_punctatus
ENSMEUG00000006955	CPSF4	100	97.026	ENSSTOG00000001688	CPSF4	100	97.026	Ictidomys_tridecemlineatus
ENSMEUG00000006955	CPSF4	100	97.026	ENSJJAG00000019426	Cpsf4	100	97.026	Jaculus_jaculus
ENSMEUG00000006955	CPSF4	100	82.963	ENSKMAG00000015642	cpsf4	100	82.963	Kryptolebias_marmoratus
ENSMEUG00000006955	CPSF4	100	89.630	ENSLACG00000010938	CPSF4	100	89.630	Latimeria_chalumnae
ENSMEUG00000006955	CPSF4	100	60.370	ENSLACG00000018470	-	100	60.370	Latimeria_chalumnae
ENSMEUG00000006955	CPSF4	100	90.706	ENSLOCG00000004814	cpsf4	100	90.706	Lepisosteus_oculatus
ENSMEUG00000006955	CPSF4	100	96.654	ENSLAFG00000000159	CPSF4	100	96.654	Loxodonta_africana
ENSMEUG00000006955	CPSF4	100	97.770	ENSMFAG00000001462	CPSF4	100	97.770	Macaca_fascicularis
ENSMEUG00000006955	CPSF4	100	97.770	ENSMMUG00000019191	CPSF4	100	97.770	Macaca_mulatta
ENSMEUG00000006955	CPSF4	100	97.770	ENSMNEG00000032306	CPSF4	100	97.770	Macaca_nemestrina
ENSMEUG00000006955	CPSF4	100	97.770	ENSMLEG00000034721	CPSF4	100	97.770	Mandrillus_leucophaeus
ENSMEUG00000006955	CPSF4	100	84.444	ENSMAMG00000006244	cpsf4	100	83.883	Mastacembelus_armatus
ENSMEUG00000006955	CPSF4	100	85.185	ENSMZEG00005007515	cpsf4	100	85.185	Maylandia_zebra
ENSMEUG00000006955	CPSF4	87	85.957	ENSMGAG00000004235	CPSF4	100	84.255	Meleagris_gallopavo
ENSMEUG00000006955	CPSF4	100	97.026	ENSMAUG00000021253	Cpsf4	100	97.026	Mesocricetus_auratus
ENSMEUG00000006955	CPSF4	100	97.398	ENSMICG00000017429	CPSF4	100	97.398	Microcebus_murinus
ENSMEUG00000006955	CPSF4	100	97.026	ENSMOCG00000014901	Cpsf4	100	97.026	Microtus_ochrogaster
ENSMEUG00000006955	CPSF4	100	84.444	ENSMMOG00000001813	cpsf4	100	84.444	Mola_mola
ENSMEUG00000006955	CPSF4	100	100.000	ENSMODG00000001367	CPSF4	100	100.000	Monodelphis_domestica
ENSMEUG00000006955	CPSF4	100	83.704	ENSMALG00000012611	cpsf4	100	83.704	Monopterus_albus
ENSMEUG00000006955	CPSF4	100	97.026	MGP_CAROLIEiJ_G0028012	Cpsf4	100	97.026	Mus_caroli
ENSMEUG00000006955	CPSF4	100	97.026	ENSMUSG00000029625	Cpsf4	100	97.026	Mus_musculus
ENSMEUG00000006955	CPSF4	100	97.026	MGP_PahariEiJ_G0024581	Cpsf4	100	97.026	Mus_pahari
ENSMEUG00000006955	CPSF4	100	97.398	MGP_SPRETEiJ_G0029013	Cpsf4	100	97.398	Mus_spretus
ENSMEUG00000006955	CPSF4	100	97.026	ENSMPUG00000016508	CPSF4	100	97.026	Mustela_putorius_furo
ENSMEUG00000006955	CPSF4	87	85.957	ENSMLUG00000010980	CPSF4	100	83.404	Myotis_lucifugus
ENSMEUG00000006955	CPSF4	100	97.026	ENSNGAG00000001567	Cpsf4	100	97.026	Nannospalax_galili
ENSMEUG00000006955	CPSF4	91	84.553	ENSNBRG00000003943	cpsf4	98	84.553	Neolamprologus_brichardi
ENSMEUG00000006955	CPSF4	100	94.796	ENSNLEG00000011074	CPSF4	100	94.796	Nomascus_leucogenys
ENSMEUG00000006955	CPSF4	100	96.654	ENSOPRG00000013663	CPSF4	100	96.654	Ochotona_princeps
ENSMEUG00000006955	CPSF4	100	73.260	ENSODEG00000009779	-	100	73.260	Octodon_degus
ENSMEUG00000006955	CPSF4	100	97.026	ENSODEG00000011181	-	100	97.026	Octodon_degus
ENSMEUG00000006955	CPSF4	99	75.094	ENSODEG00000018283	-	91	72.830	Octodon_degus
ENSMEUG00000006955	CPSF4	100	85.185	ENSONIG00000008495	cpsf4	100	85.185	Oreochromis_niloticus
ENSMEUG00000006955	CPSF4	100	54.317	ENSOANG00000009568	-	100	53.237	Ornithorhynchus_anatinus
ENSMEUG00000006955	CPSF4	87	97.872	ENSOANG00000007729	CPSF4	100	97.872	Ornithorhynchus_anatinus
ENSMEUG00000006955	CPSF4	100	96.654	ENSOCUG00000002437	CPSF4	70	96.654	Oryctolagus_cuniculus
ENSMEUG00000006955	CPSF4	100	84.387	ENSORLG00000022798	cpsf4	100	84.387	Oryzias_latipes
ENSMEUG00000006955	CPSF4	100	84.387	ENSORLG00020008548	cpsf4	100	84.387	Oryzias_latipes_hni
ENSMEUG00000006955	CPSF4	100	84.015	ENSORLG00015019575	cpsf4	100	84.015	Oryzias_latipes_hsok
ENSMEUG00000006955	CPSF4	100	82.900	ENSOMEG00000005176	cpsf4	100	82.900	Oryzias_melastigma
ENSMEUG00000006955	CPSF4	100	97.398	ENSOGAG00000010884	CPSF4	100	97.398	Otolemur_garnettii
ENSMEUG00000006955	CPSF4	100	86.447	ENSOARG00000018668	CPSF4	100	86.081	Ovis_aries
ENSMEUG00000006955	CPSF4	100	98.141	ENSPPAG00000043355	CPSF4	100	98.141	Pan_paniscus
ENSMEUG00000006955	CPSF4	100	97.026	ENSPPRG00000003134	CPSF4	100	97.026	Panthera_pardus
ENSMEUG00000006955	CPSF4	90	97.107	ENSPTIG00000005604	CPSF4	90	97.107	Panthera_tigris_altaica
ENSMEUG00000006955	CPSF4	100	98.141	ENSPTRG00000019453	CPSF4	100	98.141	Pan_troglodytes
ENSMEUG00000006955	CPSF4	100	97.770	ENSPANG00000023123	CPSF4	100	97.770	Papio_anubis
ENSMEUG00000006955	CPSF4	100	85.766	ENSPKIG00000014278	cpsf4	100	85.766	Paramormyrops_kingsleyae
ENSMEUG00000006955	CPSF4	80	97.685	ENSPSIG00000011229	CPSF4	100	97.685	Pelodiscus_sinensis
ENSMEUG00000006955	CPSF4	81	58.904	ENSPSIG00000018198	-	100	57.798	Pelodiscus_sinensis
ENSMEUG00000006955	CPSF4	100	73.978	ENSPMGG00000017735	cpsf4	100	72.119	Periophthalmus_magnuspinnatus
ENSMEUG00000006955	CPSF4	100	97.026	ENSPEMG00000004508	Cpsf4	100	97.026	Peromyscus_maniculatus_bairdii
ENSMEUG00000006955	CPSF4	100	100.000	ENSPCIG00000024776	CPSF4	100	100.000	Phascolarctos_cinereus
ENSMEUG00000006955	CPSF4	100	82.963	ENSPFOG00000014912	cpsf4	100	82.963	Poecilia_formosa
ENSMEUG00000006955	CPSF4	100	75.465	ENSPLAG00000009599	cpsf4	100	75.465	Poecilia_latipinna
ENSMEUG00000006955	CPSF4	100	82.963	ENSPMEG00000009790	cpsf4	100	82.963	Poecilia_mexicana
ENSMEUG00000006955	CPSF4	100	82.222	ENSPREG00000018166	cpsf4	100	79.554	Poecilia_reticulata
ENSMEUG00000006955	CPSF4	87	97.863	ENSPPYG00000017378	CPSF4	100	97.863	Pongo_abelii
ENSMEUG00000006955	CPSF4	100	95.911	ENSPCAG00000001892	CPSF4	100	95.911	Procavia_capensis
ENSMEUG00000006955	CPSF4	100	97.026	ENSPCOG00000012771	CPSF4	100	97.026	Propithecus_coquereli
ENSMEUG00000006955	CPSF4	100	90.335	ENSPVAG00000007531	CPSF4	100	90.335	Pteropus_vampyrus
ENSMEUG00000006955	CPSF4	100	85.185	ENSPNYG00000018559	cpsf4	100	85.185	Pundamilia_nyererei
ENSMEUG00000006955	CPSF4	100	87.407	ENSPNAG00000003736	cpsf4	100	87.407	Pygocentrus_nattereri
ENSMEUG00000006955	CPSF4	100	87.732	ENSRNOG00000000985	Cpsf4	100	87.732	Rattus_norvegicus
ENSMEUG00000006955	CPSF4	87	97.863	ENSRBIG00000033886	CPSF4	100	97.863	Rhinopithecus_bieti
ENSMEUG00000006955	CPSF4	100	88.848	ENSRROG00000040431	CPSF4	100	88.848	Rhinopithecus_roxellana
ENSMEUG00000006955	CPSF4	100	97.770	ENSSBOG00000020493	CPSF4	100	97.770	Saimiri_boliviensis_boliviensis
ENSMEUG00000006955	CPSF4	100	100.000	ENSSHAG00000011533	CPSF4	100	100.000	Sarcophilus_harrisii
ENSMEUG00000006955	CPSF4	100	86.957	ENSSFOG00015007883	cpsf4	100	87.681	Scleropages_formosus
ENSMEUG00000006955	CPSF4	100	80.297	ENSSMAG00000006374	cpsf4	100	78.067	Scophthalmus_maximus
ENSMEUG00000006955	CPSF4	100	84.444	ENSSDUG00000018887	cpsf4	100	84.444	Seriola_dumerili
ENSMEUG00000006955	CPSF4	100	84.815	ENSSLDG00000019078	cpsf4	100	84.815	Seriola_lalandi_dorsalis
ENSMEUG00000006955	CPSF4	87	97.436	ENSSARG00000012416	CPSF4	100	97.436	Sorex_araneus
ENSMEUG00000006955	CPSF4	96	60.000	ENSSPUG00000014803	-	97	58.527	Sphenodon_punctatus
ENSMEUG00000006955	CPSF4	100	95.911	ENSSPUG00000003549	CPSF4	100	95.911	Sphenodon_punctatus
ENSMEUG00000006955	CPSF4	100	80.669	ENSSPAG00000006174	cpsf4	100	77.695	Stegastes_partitus
ENSMEUG00000006955	CPSF4	100	88.476	ENSSSCG00000026896	CPSF4	100	88.476	Sus_scrofa
ENSMEUG00000006955	CPSF4	100	86.716	ENSTGUG00000007552	CPSF4	100	84.871	Taeniopygia_guttata
ENSMEUG00000006955	CPSF4	100	81.550	ENSTRUG00000024220	cpsf4	100	81.550	Takifugu_rubripes
ENSMEUG00000006955	CPSF4	100	80.812	ENSTNIG00000006265	cpsf4	100	82.288	Tetraodon_nigroviridis
ENSMEUG00000006955	CPSF4	87	88.034	ENSTBEG00000011406	CPSF4	100	88.034	Tupaia_belangeri
ENSMEUG00000006955	CPSF4	100	78.067	ENSTTRG00000003007	CPSF4	100	78.067	Tursiops_truncatus
ENSMEUG00000006955	CPSF4	92	83.401	ENSUAMG00000008051	CPSF4	85	84.211	Ursus_americanus
ENSMEUG00000006955	CPSF4	100	87.732	ENSUMAG00000009474	CPSF4	100	87.732	Ursus_maritimus
ENSMEUG00000006955	CPSF4	100	88.104	ENSVVUG00000008824	CPSF4	100	88.104	Vulpes_vulpes
ENSMEUG00000006955	CPSF4	100	89.606	ENSXETG00000009892	cpsf4	100	89.606	Xenopus_tropicalis
ENSMEUG00000006955	CPSF4	99	61.194	ENSXETG00000004641	cpsf4l	99	61.194	Xenopus_tropicalis
ENSMEUG00000006955	CPSF4	100	82.593	ENSXCOG00000016040	cpsf4	100	82.593	Xiphophorus_couchianus
ENSMEUG00000006955	CPSF4	100	82.963	ENSXMAG00000024670	cpsf4	100	82.963	Xiphophorus_maculatus