EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMEUG00000006978 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 12755 bases
Position: chrGeneScaffold_9626:15041-27795
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000006374	zf-C2H2	PF00096.26	5.9e-63	1	11
ENSMEUP00000006374	zf-C2H2	PF00096.26	5.9e-63	2	11
ENSMEUP00000006374	zf-C2H2	PF00096.26	5.9e-63	3	11
ENSMEUP00000006374	zf-C2H2	PF00096.26	5.9e-63	4	11
ENSMEUP00000006374	zf-C2H2	PF00096.26	5.9e-63	5	11
ENSMEUP00000006374	zf-C2H2	PF00096.26	5.9e-63	6	11
ENSMEUP00000006374	zf-C2H2	PF00096.26	5.9e-63	7	11
ENSMEUP00000006374	zf-C2H2	PF00096.26	5.9e-63	8	11
ENSMEUP00000006374	zf-C2H2	PF00096.26	5.9e-63	9	11
ENSMEUP00000006374	zf-C2H2	PF00096.26	5.9e-63	10	11
ENSMEUP00000006374	zf-C2H2	PF00096.26	5.9e-63	11	11
ENSMEUP00000006374	zf-met	PF12874.7	8.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000007005	-	1533	-	ENSMEUP00000006374	511 (aa)	-	UPI0001B21807

Gene Model

Click here to download ENSMEUG00000006978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000006978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMEUG00000006978	-	92	51.203	ENSMEUG00000010447	ZNF774	70	51.203
ENSMEUG00000006978	-	87	33.846	ENSMEUG00000007504	ZNF646	98	32.103
ENSMEUG00000006978	-	81	34.681	ENSMEUG00000012147	ZNF628	58	34.764
ENSMEUG00000006978	-	71	43.939	ENSMEUG00000011922	OVOL2	61	43.939
ENSMEUG00000006978	-	89	56.081	ENSMEUG00000012153	-	71	50.957
ENSMEUG00000006978	-	87	48.148	ENSMEUG00000000503	ZNF768	71	48.148
ENSMEUG00000006978	-	81	38.739	ENSMEUG00000016664	ZNF574	87	38.739
ENSMEUG00000006978	-	99	54.615	ENSMEUG00000005903	-	85	60.000
ENSMEUG00000006978	-	81	35.088	ENSMEUG00000006576	-	61	35.088
ENSMEUG00000006978	-	87	47.174	ENSMEUG00000016725	-	100	47.174
ENSMEUG00000006978	-	83	41.570	ENSMEUG00000005611	-	77	41.570
ENSMEUG00000006978	-	81	43.284	ENSMEUG00000009510	SNAI2	55	43.284
ENSMEUG00000006978	-	77	61.905	ENSMEUG00000005793	-	64	61.111
ENSMEUG00000006978	-	89	55.963	ENSMEUG00000004196	-	70	55.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000006978	-	85	51.942	ENSAMXG00000043019	-	97	51.942	Astyanax_mexicanus
ENSMEUG00000006978	-	93	50.155	ENSAMXG00000044028	-	92	50.155	Astyanax_mexicanus
ENSMEUG00000006978	-	90	49.840	ENSAMXG00000029783	-	99	49.840	Astyanax_mexicanus
ENSMEUG00000006978	-	99	47.843	ENSAMXG00000034096	-	88	50.218	Astyanax_mexicanus
ENSMEUG00000006978	-	83	51.095	ENSAMXG00000000353	-	97	51.095	Astyanax_mexicanus
ENSMEUG00000006978	-	87	51.590	ENSBTAG00000040358	-	100	51.515	Bos_taurus
ENSMEUG00000006978	-	89	45.636	ENSBTAG00000014593	-	81	44.371	Bos_taurus
ENSMEUG00000006978	-	81	50.382	ENSCSAG00000000471	-	99	52.161	Chlorocebus_sabaeus
ENSMEUG00000006978	-	99	53.448	ENSCPBG00000002430	-	83	53.448	Chrysemys_picta_bellii
ENSMEUG00000006978	-	76	44.023	ENSCPBG00000009609	-	91	42.933	Chrysemys_picta_bellii
ENSMEUG00000006978	-	87	47.586	ENSDNOG00000042588	-	87	46.114	Dasypus_novemcinctus
ENSMEUG00000006978	-	93	48.148	ENSDNOG00000047529	-	72	34.278	Dasypus_novemcinctus
ENSMEUG00000006978	-	93	48.347	ENSEBUG00000013221	-	96	46.825	Eptatretus_burgeri
ENSMEUG00000006978	-	94	43.922	ENSEBUG00000016969	-	78	43.922	Eptatretus_burgeri
ENSMEUG00000006978	-	98	45.750	ENSEBUG00000016164	-	76	45.750	Eptatretus_burgeri
ENSMEUG00000006978	-	92	45.798	ENSELUG00000019008	-	88	43.144	Esox_lucius
ENSMEUG00000006978	-	87	54.676	ENSFCAG00000043966	-	99	51.748	Felis_catus
ENSMEUG00000006978	-	80	49.419	ENSGAFG00000021131	-	83	49.419	Gambusia_affinis
ENSMEUG00000006978	-	81	45.865	ENSGAFG00000013048	-	72	44.030	Gambusia_affinis
ENSMEUG00000006978	-	91	53.211	ENSGGOG00000042802	-	99	53.026	Gorilla_gorilla
ENSMEUG00000006978	-	81	51.549	ENSHCOG00000014713	-	97	51.549	Hippocampus_comes
ENSMEUG00000006978	-	81	48.551	ENSHCOG00000019512	-	92	48.551	Hippocampus_comes
ENSMEUG00000006978	-	95	51.399	ENSMFAG00000008648	-	99	52.738	Macaca_fascicularis
ENSMEUG00000006978	-	95	51.399	ENSMNEG00000001556	-	99	52.738	Macaca_nemestrina
ENSMEUG00000006978	-	81	50.891	ENSMLEG00000007035	-	99	52.450	Mandrillus_leucophaeus
ENSMEUG00000006978	-	96	43.556	ENSMAUG00000015263	-	69	45.261	Mesocricetus_auratus
ENSMEUG00000006978	-	93	44.191	ENSMOCG00000003394	-	62	45.631	Microtus_ochrogaster
ENSMEUG00000006978	-	89	53.690	ENSMODG00000028916	-	70	53.690	Monodelphis_domestica
ENSMEUG00000006978	-	92	44.904	ENSMPUG00000006562	-	66	44.904	Mustela_putorius_furo
ENSMEUG00000006978	-	81	48.691	ENSNBRG00000010194	-	65	50.000	Neolamprologus_brichardi
ENSMEUG00000006978	-	91	51.145	ENSNLEG00000018988	-	99	53.026	Nomascus_leucogenys
ENSMEUG00000006978	-	82	41.118	ENSOGAG00000024538	-	59	43.793	Otolemur_garnettii
ENSMEUG00000006978	-	91	53.517	ENSPPAG00000014496	-	99	53.314	Pan_paniscus
ENSMEUG00000006978	-	81	51.145	ENSPANG00000030207	-	99	52.450	Papio_anubis
ENSMEUG00000006978	-	92	48.958	ENSPSIG00000009650	-	70	48.958	Pelodiscus_sinensis
ENSMEUG00000006978	-	92	58.649	ENSPSIG00000010405	-	99	58.649	Pelodiscus_sinensis
ENSMEUG00000006978	-	89	44.667	ENSPEMG00000010242	-	56	45.542	Peromyscus_maniculatus_bairdii
ENSMEUG00000006978	-	81	45.113	ENSPLAG00000020710	-	69	42.806	Poecilia_latipinna
ENSMEUG00000006978	-	87	49.340	ENSPLAG00000021062	-	91	49.140	Poecilia_latipinna
ENSMEUG00000006978	-	91	44.311	ENSPLAG00000010389	-	76	42.197	Poecilia_latipinna
ENSMEUG00000006978	-	98	46.859	ENSPCAG00000009106	-	84	46.859	Procavia_capensis
ENSMEUG00000006978	-	85	43.304	ENSPNYG00000024243	-	92	41.219	Pundamilia_nyererei
ENSMEUG00000006978	-	95	51.320	ENSPNAG00000018644	-	99	52.239	Pygocentrus_nattereri
ENSMEUG00000006978	-	93	44.344	ENSSHAG00000001415	-	92	46.341	Sarcophilus_harrisii
ENSMEUG00000006978	-	85	49.351	ENSSDUG00000009534	-	66	47.664	Seriola_dumerili
ENSMEUG00000006978	-	93	44.160	ENSSLDG00000013760	-	94	41.451	Seriola_lalandi_dorsalis
ENSMEUG00000006978	-	89	52.547	ENSSPUG00000007147	-	94	52.547	Sphenodon_punctatus
ENSMEUG00000006978	-	93	45.860	ENSTRUG00000006896	-	84	46.218	Takifugu_rubripes
ENSMEUG00000006978	-	98	46.606	ENSVPAG00000011867	-	89	46.606	Vicugna_pacos
ENSMEUG00000006978	-	81	40.502	ENSXCOG00000009794	-	76	52.381	Xiphophorus_couchianus