EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000007801 (Gene tree)
Gene ID: -
Gene Symbol: LSM8
Alias: YJR022W
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Plus strand
Length: 10129 bases
Position: chrGeneScaffold_2304:1241-11369
Accession: 20471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000007126	LSM	PF01423.22	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000007824	LSM8-201	288	-	ENSMEUP00000007126	95 (aa)	-	UPI0001B1F52C

Gene Model

Click here to download ENSMEUG00000007801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000007801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000007801	LSM8	100	88.542	ENSG00000128534	LSM8	100	88.542	Homo_sapiens
ENSMEUG00000007801	LSM8	100	81.250	ENSAPOG00000008649	lsm8	100	81.250	Acanthochromis_polyacanthus
ENSMEUG00000007801	LSM8	100	88.542	ENSAMEG00000001162	LSM8	100	88.542	Ailuropoda_melanoleuca
ENSMEUG00000007801	LSM8	78	84.000	ENSACIG00000014694	lsm8	100	84.000	Amphilophus_citrinellus
ENSMEUG00000007801	LSM8	100	81.250	ENSAOCG00000013926	lsm8	100	81.250	Amphiprion_ocellaris
ENSMEUG00000007801	LSM8	100	81.250	ENSAPEG00000023502	lsm8	100	81.250	Amphiprion_percula
ENSMEUG00000007801	LSM8	78	84.000	ENSATEG00000023432	lsm8	100	84.000	Anabas_testudineus
ENSMEUG00000007801	LSM8	94	82.222	ENSAPLG00000005115	LSM8	91	82.222	Anas_platyrhynchos
ENSMEUG00000007801	LSM8	100	88.542	ENSANAG00000027771	LSM8	100	88.542	Aotus_nancymaae
ENSMEUG00000007801	LSM8	100	81.250	ENSACLG00000011253	lsm8	100	81.250	Astatotilapia_calliptera
ENSMEUG00000007801	LSM8	100	83.333	ENSAMXG00000042902	lsm8	100	83.333	Astyanax_mexicanus
ENSMEUG00000007801	LSM8	100	88.542	ENSBTAG00000012649	LSM8	100	88.542	Bos_taurus
ENSMEUG00000007801	LSM8	98	50.000	WBGene00003082	lsm-8	96	50.000	Caenorhabditis_elegans
ENSMEUG00000007801	LSM8	100	88.542	ENSCJAG00000046406	LSM8	100	88.542	Callithrix_jacchus
ENSMEUG00000007801	LSM8	99	88.421	ENSCAFG00000016459	LSM8	96	88.421	Canis_familiaris
ENSMEUG00000007801	LSM8	100	88.542	ENSCAFG00020007643	-	100	88.542	Canis_lupus_dingo
ENSMEUG00000007801	LSM8	88	85.882	ENSCAFG00020012800	-	66	85.882	Canis_lupus_dingo
ENSMEUG00000007801	LSM8	92	84.091	ENSCHIG00000014201	LSM8	94	84.091	Capra_hircus
ENSMEUG00000007801	LSM8	100	88.542	ENSTSYG00000032434	LSM8	100	88.542	Carlito_syrichta
ENSMEUG00000007801	LSM8	77	85.135	ENSCAPG00000008253	LSM8	100	85.135	Cavia_aperea
ENSMEUG00000007801	LSM8	100	88.542	ENSCPOG00000035673	LSM8	100	88.542	Cavia_porcellus
ENSMEUG00000007801	LSM8	100	88.542	ENSCCAG00000021329	LSM8	100	88.542	Cebus_capucinus
ENSMEUG00000007801	LSM8	100	88.542	ENSCATG00000045302	LSM8	100	88.542	Cercocebus_atys
ENSMEUG00000007801	LSM8	100	88.542	ENSCLAG00000003726	LSM8	100	88.542	Chinchilla_lanigera
ENSMEUG00000007801	LSM8	100	84.375	ENSCSAG00000019007	-	100	84.375	Chlorocebus_sabaeus
ENSMEUG00000007801	LSM8	100	88.542	ENSCSAG00000010802	-	100	88.542	Chlorocebus_sabaeus
ENSMEUG00000007801	LSM8	88	87.059	ENSCPBG00000008154	LSM8	87	87.059	Chrysemys_picta_bellii
ENSMEUG00000007801	LSM8	100	64.583	ENSCING00000024877	-	100	64.583	Ciona_intestinalis
ENSMEUG00000007801	LSM8	100	88.542	ENSCANG00000040728	LSM8	100	88.542	Colobus_angolensis_palliatus
ENSMEUG00000007801	LSM8	100	88.542	ENSCGRG00001000450	Lsm8	100	88.542	Cricetulus_griseus_chok1gshd
ENSMEUG00000007801	LSM8	88	87.059	ENSCGRG00000005587	Lsm8	100	87.059	Cricetulus_griseus_crigri
ENSMEUG00000007801	LSM8	100	71.875	ENSCSEG00000004164	lsm8	100	71.875	Cynoglossus_semilaevis
ENSMEUG00000007801	LSM8	100	80.208	ENSCVAG00000020547	lsm8	100	80.208	Cyprinodon_variegatus
ENSMEUG00000007801	LSM8	100	80.208	ENSDARG00000091656	lsm8	100	80.208	Danio_rerio
ENSMEUG00000007801	LSM8	100	88.542	ENSDNOG00000034613	LSM8	100	88.542	Dasypus_novemcinctus
ENSMEUG00000007801	LSM8	100	88.542	ENSDORG00000027868	Lsm8	100	88.542	Dipodomys_ordii
ENSMEUG00000007801	LSM8	98	57.447	FBgn0035271	CG2021	99	57.447	Drosophila_melanogaster
ENSMEUG00000007801	LSM8	100	87.500	ENSETEG00000011594	LSM8	100	87.500	Echinops_telfairi
ENSMEUG00000007801	LSM8	77	78.378	ENSEBUG00000012017	lsm8	100	78.378	Eptatretus_burgeri
ENSMEUG00000007801	LSM8	100	88.542	ENSEASG00005008932	LSM8	62	88.542	Equus_asinus_asinus
ENSMEUG00000007801	LSM8	92	84.091	ENSECAG00000024025	LSM8	80	84.091	Equus_caballus
ENSMEUG00000007801	LSM8	100	80.208	ENSELUG00000010138	lsm8	100	80.208	Esox_lucius
ENSMEUG00000007801	LSM8	85	65.854	ENSFCAG00000044794	-	83	65.854	Felis_catus
ENSMEUG00000007801	LSM8	100	88.542	ENSFCAG00000036620	-	100	88.542	Felis_catus
ENSMEUG00000007801	LSM8	100	87.500	ENSFALG00000010023	LSM8	100	87.500	Ficedula_albicollis
ENSMEUG00000007801	LSM8	100	88.542	ENSFDAG00000019530	LSM8	100	88.542	Fukomys_damarensis
ENSMEUG00000007801	LSM8	100	81.250	ENSFHEG00000013729	lsm8	100	81.250	Fundulus_heteroclitus
ENSMEUG00000007801	LSM8	100	87.500	ENSGALG00000009110	LSM8	100	87.500	Gallus_gallus
ENSMEUG00000007801	LSM8	100	80.208	ENSGAFG00000001135	lsm8	100	80.208	Gambusia_affinis
ENSMEUG00000007801	LSM8	100	88.542	ENSGAGG00000017366	LSM8	100	88.542	Gopherus_agassizii
ENSMEUG00000007801	LSM8	100	88.542	ENSGGOG00000041883	LSM8	100	88.542	Gorilla_gorilla
ENSMEUG00000007801	LSM8	100	81.250	ENSHBUG00000003646	lsm8	100	81.250	Haplochromis_burtoni
ENSMEUG00000007801	LSM8	71	83.824	ENSHGLG00000001988	-	99	83.824	Heterocephalus_glaber_female
ENSMEUG00000007801	LSM8	100	82.292	ENSHGLG00000019782	-	100	82.292	Heterocephalus_glaber_female
ENSMEUG00000007801	LSM8	99	85.263	ENSHGLG00100003934	-	95	85.263	Heterocephalus_glaber_male
ENSMEUG00000007801	LSM8	100	86.316	ENSHGLG00100012166	-	100	86.316	Heterocephalus_glaber_male
ENSMEUG00000007801	LSM8	100	80.208	ENSHCOG00000005037	lsm8	100	80.208	Hippocampus_comes
ENSMEUG00000007801	LSM8	100	83.333	ENSIPUG00000019811	NAA38	100	83.333	Ictalurus_punctatus
ENSMEUG00000007801	LSM8	100	88.542	ENSSTOG00000009039	LSM8	100	88.542	Ictidomys_tridecemlineatus
ENSMEUG00000007801	LSM8	92	77.273	ENSSTOG00000034801	-	81	77.273	Ictidomys_tridecemlineatus
ENSMEUG00000007801	LSM8	100	88.542	ENSJJAG00000009031	Lsm8	99	88.542	Jaculus_jaculus
ENSMEUG00000007801	LSM8	100	81.250	ENSKMAG00000018983	lsm8	100	81.250	Kryptolebias_marmoratus
ENSMEUG00000007801	LSM8	100	83.333	ENSLACG00000010231	LSM8	100	83.333	Latimeria_chalumnae
ENSMEUG00000007801	LSM8	100	82.292	ENSLOCG00000015580	lsm8	100	82.292	Lepisosteus_oculatus
ENSMEUG00000007801	LSM8	100	87.629	ENSLAFG00000011242	LSM8	100	87.629	Loxodonta_africana
ENSMEUG00000007801	LSM8	100	88.542	ENSMFAG00000035798	LSM8	100	88.542	Macaca_fascicularis
ENSMEUG00000007801	LSM8	100	85.417	ENSMFAG00000013044	-	100	85.417	Macaca_fascicularis
ENSMEUG00000007801	LSM8	100	88.542	ENSMMUG00000046401	LSM8	100	83.784	Macaca_mulatta
ENSMEUG00000007801	LSM8	100	88.542	ENSMNEG00000036764	-	100	88.542	Macaca_nemestrina
ENSMEUG00000007801	LSM8	78	84.000	ENSMNEG00000011141	-	100	84.000	Macaca_nemestrina
ENSMEUG00000007801	LSM8	100	88.542	ENSMLEG00000035828	-	100	88.542	Mandrillus_leucophaeus
ENSMEUG00000007801	LSM8	100	73.958	ENSMLEG00000039324	-	100	73.958	Mandrillus_leucophaeus
ENSMEUG00000007801	LSM8	78	84.000	ENSMAMG00000018839	lsm8	100	84.000	Mastacembelus_armatus
ENSMEUG00000007801	LSM8	100	81.250	ENSMZEG00005019138	lsm8	100	81.250	Maylandia_zebra
ENSMEUG00000007801	LSM8	100	87.500	ENSMGAG00000008808	LSM8	100	87.500	Meleagris_gallopavo
ENSMEUG00000007801	LSM8	100	72.632	ENSMAUG00000015356	-	100	72.632	Mesocricetus_auratus
ENSMEUG00000007801	LSM8	73	81.429	ENSMAUG00000020287	-	95	81.429	Mesocricetus_auratus
ENSMEUG00000007801	LSM8	100	81.250	ENSMAUG00000015721	-	100	81.250	Mesocricetus_auratus
ENSMEUG00000007801	LSM8	100	88.542	ENSMICG00000042730	LSM8	100	88.542	Microcebus_murinus
ENSMEUG00000007801	LSM8	100	88.542	ENSMOCG00000001688	Lsm8	100	88.542	Microtus_ochrogaster
ENSMEUG00000007801	LSM8	78	84.000	ENSMMOG00000006046	lsm8	100	84.000	Mola_mola
ENSMEUG00000007801	LSM8	76	73.333	ENSMODG00000015729	LSM8	96	73.333	Monodelphis_domestica
ENSMEUG00000007801	LSM8	100	82.292	ENSMALG00000000405	lsm8	100	82.292	Monopterus_albus
ENSMEUG00000007801	LSM8	100	88.542	MGP_CAROLIEiJ_G0028125	-	100	88.542	Mus_caroli
ENSMEUG00000007801	LSM8	100	88.542	ENSMUSG00000044155	Lsm8	100	88.542	Mus_musculus
ENSMEUG00000007801	LSM8	100	88.542	MGP_PahariEiJ_G0021881	Lsm8	100	88.542	Mus_pahari
ENSMEUG00000007801	LSM8	100	88.542	MGP_SPRETEiJ_G0029125	-	100	88.542	Mus_spretus
ENSMEUG00000007801	LSM8	100	87.500	ENSMLUG00000027762	-	100	87.500	Myotis_lucifugus
ENSMEUG00000007801	LSM8	100	88.542	ENSMLUG00000006837	-	100	88.542	Myotis_lucifugus
ENSMEUG00000007801	LSM8	100	88.542	ENSNGAG00000016554	Lsm8	100	88.542	Nannospalax_galili
ENSMEUG00000007801	LSM8	100	81.250	ENSNBRG00000014441	lsm8	100	81.250	Neolamprologus_brichardi
ENSMEUG00000007801	LSM8	100	88.542	ENSNLEG00000011768	LSM8	100	88.542	Nomascus_leucogenys
ENSMEUG00000007801	LSM8	88	87.059	ENSOPRG00000014809	LSM8	100	87.059	Ochotona_princeps
ENSMEUG00000007801	LSM8	89	75.581	ENSODEG00000020290	-	100	75.581	Octodon_degus
ENSMEUG00000007801	LSM8	100	88.542	ENSODEG00000000418	-	100	88.542	Octodon_degus
ENSMEUG00000007801	LSM8	100	87.500	ENSOANG00000014536	LSM8	100	87.500	Ornithorhynchus_anatinus
ENSMEUG00000007801	LSM8	100	87.629	ENSOCUG00000017359	LSM8	100	87.629	Oryctolagus_cuniculus
ENSMEUG00000007801	LSM8	100	71.875	ENSORLG00000017432	lsm8	100	71.875	Oryzias_latipes
ENSMEUG00000007801	LSM8	100	71.875	ENSORLG00020004376	lsm8	100	71.875	Oryzias_latipes_hni
ENSMEUG00000007801	LSM8	100	81.250	ENSORLG00015003757	lsm8	100	81.250	Oryzias_latipes_hsok
ENSMEUG00000007801	LSM8	100	70.833	ENSOMEG00000022509	lsm8	100	70.833	Oryzias_melastigma
ENSMEUG00000007801	LSM8	100	88.542	ENSOGAG00000013377	LSM8	100	88.542	Otolemur_garnettii
ENSMEUG00000007801	LSM8	100	88.542	ENSOARG00000017974	LSM8	100	88.542	Ovis_aries
ENSMEUG00000007801	LSM8	78	86.667	ENSPPAG00000043228	-	100	86.667	Pan_paniscus
ENSMEUG00000007801	LSM8	100	88.542	ENSPPRG00000006444	LSM8	100	88.542	Panthera_pardus
ENSMEUG00000007801	LSM8	100	88.542	ENSPTIG00000004722	LSM8	100	88.542	Panthera_tigris_altaica
ENSMEUG00000007801	LSM8	78	86.667	ENSPTRG00000046596	-	100	86.667	Pan_troglodytes
ENSMEUG00000007801	LSM8	100	88.542	ENSPANG00000035470	-	100	88.542	Papio_anubis
ENSMEUG00000007801	LSM8	100	82.292	ENSPANG00000019395	-	100	82.292	Papio_anubis
ENSMEUG00000007801	LSM8	88	84.706	ENSPKIG00000006092	lsm8	86	84.706	Paramormyrops_kingsleyae
ENSMEUG00000007801	LSM8	78	86.667	ENSPSIG00000017054	LSM8	100	86.667	Pelodiscus_sinensis
ENSMEUG00000007801	LSM8	78	84.000	ENSPMGG00000016442	lsm8	100	84.000	Periophthalmus_magnuspinnatus
ENSMEUG00000007801	LSM8	77	83.784	ENSPEMG00000009153	Lsm8	100	83.784	Peromyscus_maniculatus_bairdii
ENSMEUG00000007801	LSM8	97	88.172	ENSPCIG00000021467	LSM8	98	88.172	Phascolarctos_cinereus
ENSMEUG00000007801	LSM8	100	80.208	ENSPFOG00000012340	lsm8	100	80.208	Poecilia_formosa
ENSMEUG00000007801	LSM8	100	73.958	ENSPLAG00000000516	lsm8	100	73.958	Poecilia_latipinna
ENSMEUG00000007801	LSM8	100	80.208	ENSPMEG00000022567	lsm8	100	80.208	Poecilia_mexicana
ENSMEUG00000007801	LSM8	73	75.325	ENSPREG00000005527	lsm8	69	75.325	Poecilia_reticulata
ENSMEUG00000007801	LSM8	100	88.542	ENSPPYG00000017942	LSM8	100	88.542	Pongo_abelii
ENSMEUG00000007801	LSM8	100	88.542	ENSPCOG00000003309	-	100	88.542	Propithecus_coquereli
ENSMEUG00000007801	LSM8	99	69.474	ENSPCOG00000017982	-	99	69.474	Propithecus_coquereli
ENSMEUG00000007801	LSM8	88	85.882	ENSPVAG00000000990	LSM8	100	85.882	Pteropus_vampyrus
ENSMEUG00000007801	LSM8	100	81.250	ENSPNYG00000011448	lsm8	100	81.250	Pundamilia_nyererei
ENSMEUG00000007801	LSM8	100	83.333	ENSPNAG00000010252	lsm8	100	83.333	Pygocentrus_nattereri
ENSMEUG00000007801	LSM8	100	88.542	ENSRNOG00000058677	Lsm8	100	88.542	Rattus_norvegicus
ENSMEUG00000007801	LSM8	100	88.542	ENSRBIG00000032851	LSM8	100	88.542	Rhinopithecus_bieti
ENSMEUG00000007801	LSM8	100	88.542	ENSRROG00000039618	LSM8	100	88.542	Rhinopithecus_roxellana
ENSMEUG00000007801	LSM8	100	88.542	ENSSBOG00000023223	LSM8	100	88.542	Saimiri_boliviensis_boliviensis
ENSMEUG00000007801	LSM8	100	88.542	ENSSHAG00000018435	-	100	88.542	Sarcophilus_harrisii
ENSMEUG00000007801	LSM8	100	80.208	ENSSFOG00015004412	lsm8	100	80.208	Scleropages_formosus
ENSMEUG00000007801	LSM8	78	84.000	ENSSMAG00000009458	lsm8	100	84.000	Scophthalmus_maximus
ENSMEUG00000007801	LSM8	100	81.250	ENSSDUG00000014702	lsm8	100	81.250	Seriola_dumerili
ENSMEUG00000007801	LSM8	78	84.000	ENSSLDG00000016870	lsm8	100	84.000	Seriola_lalandi_dorsalis
ENSMEUG00000007801	LSM8	73	88.571	ENSSARG00000009628	-	97	88.571	Sorex_araneus
ENSMEUG00000007801	LSM8	100	88.542	ENSSPUG00000017419	LSM8	100	88.542	Sphenodon_punctatus
ENSMEUG00000007801	LSM8	100	81.250	ENSSPAG00000021422	lsm8	100	81.250	Stegastes_partitus
ENSMEUG00000007801	LSM8	100	88.542	ENSSSCG00000021652	LSM8	100	88.542	Sus_scrofa
ENSMEUG00000007801	LSM8	100	86.458	ENSTGUG00000004730	-	100	86.458	Taeniopygia_guttata
ENSMEUG00000007801	LSM8	100	85.417	ENSTGUG00000016823	-	100	85.417	Taeniopygia_guttata
ENSMEUG00000007801	LSM8	100	81.250	ENSTRUG00000025192	lsm8	100	81.250	Takifugu_rubripes
ENSMEUG00000007801	LSM8	100	81.250	ENSTNIG00000002864	lsm8	100	81.250	Tetraodon_nigroviridis
ENSMEUG00000007801	LSM8	100	88.542	ENSTTRG00000001023	LSM8	100	88.542	Tursiops_truncatus
ENSMEUG00000007801	LSM8	92	84.091	ENSUAMG00000006943	-	92	84.091	Ursus_americanus
ENSMEUG00000007801	LSM8	92	84.091	ENSUMAG00000003073	LSM8	94	84.091	Ursus_maritimus
ENSMEUG00000007801	LSM8	100	88.542	ENSVPAG00000001530	LSM8	100	88.542	Vicugna_pacos
ENSMEUG00000007801	LSM8	78	84.000	ENSVVUG00000013248	-	82	84.000	Vulpes_vulpes
ENSMEUG00000007801	LSM8	93	84.270	ENSXETG00000021829	lsm8	92	84.270	Xenopus_tropicalis
ENSMEUG00000007801	LSM8	100	78.125	ENSXCOG00000012938	lsm8	100	78.125	Xiphophorus_couchianus
ENSMEUG00000007801	LSM8	100	80.208	ENSXMAG00000025919	lsm8	100	80.208	Xiphophorus_maculatus