EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMEUG00000008267 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Plus strand
Length: 12097 bases
Position: chrGeneScaffold_5839:3027-15123
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000007547	FDF	PF09532.10	2.2e-25	1	1
ENSMEUP00000007547	SM-ATX	PF14438.6	3.4e-08	1	1
ENSMEUP00000007547	LSM14	PF12701.7	4.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000008282	-	1164	-	ENSMEUP00000007547	387 (aa)	-	UPI0001B20A95

Gene Model

Click here to download ENSMEUG00000008267's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000008267's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMEUG00000008267	-	63	76.087	ENSMEUG00000011018	LSM14A	56	74.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000008267	-	76	96.479	ENSG00000149657	LSM14B	77	96.479	Homo_sapiens
ENSMEUG00000008267	-	70	73.427	ENSAPOG00000001780	lsm14b	65	73.427	Acanthochromis_polyacanthus
ENSMEUG00000008267	-	76	93.793	ENSAMEG00000013430	LSM14B	72	92.053	Ailuropoda_melanoleuca
ENSMEUG00000008267	-	68	73.571	ENSACIG00000012266	lsm14b	69	71.429	Amphilophus_citrinellus
ENSMEUG00000008267	-	70	74.126	ENSAOCG00000012380	lsm14b	65	74.126	Amphiprion_ocellaris
ENSMEUG00000008267	-	74	64.179	ENSAOCG00000006667	LSM14B	64	63.433	Amphiprion_ocellaris
ENSMEUG00000008267	-	65	70.423	ENSAPEG00000023633	lsm14b	67	70.423	Amphiprion_percula
ENSMEUG00000008267	-	92	50.000	ENSATEG00000016603	lsm14b	68	71.329	Anabas_testudineus
ENSMEUG00000008267	-	68	93.750	ENSAPLG00000013203	LSM14B	69	92.857	Anas_platyrhynchos
ENSMEUG00000008267	-	75	92.806	ENSACAG00000016195	LSM14B	76	92.806	Anolis_carolinensis
ENSMEUG00000008267	-	77	96.575	ENSANAG00000037915	LSM14B	77	96.479	Aotus_nancymaae
ENSMEUG00000008267	-	63	73.188	ENSACLG00000019663	lsm14b	66	72.143	Astatotilapia_calliptera
ENSMEUG00000008267	-	64	77.622	ENSAMXG00000002865	lsm14b	67	76.923	Astyanax_mexicanus
ENSMEUG00000008267	-	77	97.945	ENSBTAG00000021558	LSM14B	72	96.053	Bos_taurus
ENSMEUG00000008267	-	77	96.575	ENSCJAG00000014434	LSM14B	77	96.479	Callithrix_jacchus
ENSMEUG00000008267	-	67	96.226	ENSCAFG00000012518	LSM14B	68	93.750	Canis_familiaris
ENSMEUG00000008267	-	80	97.945	ENSCAFG00020022150	LSM14B	77	97.887	Canis_lupus_dingo
ENSMEUG00000008267	-	77	97.945	ENSCHIG00000010284	-	77	97.887	Capra_hircus
ENSMEUG00000008267	-	82	74.194	ENSCHIG00000022681	-	78	74.510	Capra_hircus
ENSMEUG00000008267	-	65	95.960	ENSTSYG00000031914	LSM14B	65	95.960	Carlito_syrichta
ENSMEUG00000008267	-	65	97.000	ENSCAPG00000013059	LSM14B	74	97.000	Cavia_aperea
ENSMEUG00000008267	-	65	96.970	ENSCPOG00000038080	LSM14B	74	96.970	Cavia_porcellus
ENSMEUG00000008267	-	100	66.499	ENSCCAG00000021267	LSM14B	77	96.479	Cebus_capucinus
ENSMEUG00000008267	-	64	79.085	ENSCCAG00000024900	-	62	79.085	Cebus_capucinus
ENSMEUG00000008267	-	77	96.575	ENSCATG00000036006	LSM14B	77	96.479	Cercocebus_atys
ENSMEUG00000008267	-	65	96.970	ENSCLAG00000003186	LSM14B	74	96.970	Chinchilla_lanigera
ENSMEUG00000008267	-	77	96.575	ENSCSAG00000015729	LSM14B	72	94.737	Chlorocebus_sabaeus
ENSMEUG00000008267	-	53	77.922	ENSCHOG00000006997	-	70	83.871	Choloepus_hoffmanni
ENSMEUG00000008267	-	76	96.503	ENSCPBG00000027065	LSM14B	72	93.960	Chrysemys_picta_bellii
ENSMEUG00000008267	-	65	94.949	ENSCANG00000036986	LSM14B	74	94.949	Colobus_angolensis_palliatus
ENSMEUG00000008267	-	100	69.773	ENSCGRG00001018399	Lsm14b	77	97.887	Cricetulus_griseus_chok1gshd
ENSMEUG00000008267	-	75	60.000	ENSCSEG00000020669	LSM14B	66	59.310	Cynoglossus_semilaevis
ENSMEUG00000008267	-	91	45.924	ENSCSEG00000004722	lsm14b	66	70.423	Cynoglossus_semilaevis
ENSMEUG00000008267	-	79	79.167	ENSDARG00000025386	lsm14b	76	79.167	Danio_rerio
ENSMEUG00000008267	-	66	93.137	ENSDORG00000016683	Lsm14b	65	93.137	Dipodomys_ordii
ENSMEUG00000008267	-	58	50.215	ENSETEG00000011188	-	57	97.143	Echinops_telfairi
ENSMEUG00000008267	-	99	57.841	ENSETEG00000001869	-	77	80.986	Echinops_telfairi
ENSMEUG00000008267	-	77	97.945	ENSECAG00000010659	LSM14B	77	97.887	Equus_caballus
ENSMEUG00000008267	-	50	94.949	ENSEEUG00000007331	LSM14B	68	94.949	Erinaceus_europaeus
ENSMEUG00000008267	-	71	78.358	ENSELUG00000005780	lsm14b	69	75.839	Esox_lucius
ENSMEUG00000008267	-	71	68.966	ENSELUG00000016299	LSM14B	75	69.014	Esox_lucius
ENSMEUG00000008267	-	76	97.887	ENSFCAG00000003248	LSM14B	77	97.887	Felis_catus
ENSMEUG00000008267	-	67	98.113	ENSFALG00000010618	LSM14B	69	95.536	Ficedula_albicollis
ENSMEUG00000008267	-	89	61.625	ENSFDAG00000002214	LSM14B	74	95.960	Fukomys_damarensis
ENSMEUG00000008267	-	66	70.629	ENSFHEG00000006237	lsm14b	66	70.629	Fundulus_heteroclitus
ENSMEUG00000008267	-	74	72.028	ENSGMOG00000017115	lsm14b	72	70.629	Gadus_morhua
ENSMEUG00000008267	-	76	97.902	ENSGALG00000005125	LSM14B	75	97.842	Gallus_gallus
ENSMEUG00000008267	-	79	70.629	ENSGAFG00000020318	lsm14b	65	70.629	Gambusia_affinis
ENSMEUG00000008267	-	66	72.662	ENSGACG00000009973	lsm14b	66	72.662	Gasterosteus_aculeatus
ENSMEUG00000008267	-	67	90.476	ENSGGOG00000005630	LSM14B	70	90.476	Gorilla_gorilla
ENSMEUG00000008267	-	76	97.183	ENSHGLG00000015055	LSM14B	77	97.183	Heterocephalus_glaber_female
ENSMEUG00000008267	-	65	88.889	ENSHGLG00100015273	LSM14B	73	88.889	Heterocephalus_glaber_male
ENSMEUG00000008267	-	69	68.345	ENSHCOG00000018747	LSM14B	65	67.626	Hippocampus_comes
ENSMEUG00000008267	-	65	77.622	ENSIPUG00000014946	lsm14b	64	77.143	Ictalurus_punctatus
ENSMEUG00000008267	-	65	96.970	ENSSTOG00000020482	LSM14B	74	96.970	Ictidomys_tridecemlineatus
ENSMEUG00000008267	-	75	97.810	ENSJJAG00000012728	Lsm14b	75	97.810	Jaculus_jaculus
ENSMEUG00000008267	-	90	47.500	ENSKMAG00000017524	lsm14b	66	72.222	Kryptolebias_marmoratus
ENSMEUG00000008267	-	76	88.112	ENSLACG00000003849	LSM14B	71	85.714	Latimeria_chalumnae
ENSMEUG00000008267	-	75	80.986	ENSLOCG00000003746	lsm14b	75	80.282	Lepisosteus_oculatus
ENSMEUG00000008267	-	66	96.117	ENSLAFG00000007492	LSM14B	74	96.117	Loxodonta_africana
ENSMEUG00000008267	-	77	96.575	ENSMFAG00000041479	LSM14B	77	96.479	Macaca_fascicularis
ENSMEUG00000008267	-	76	96.479	ENSMMUG00000014084	LSM14B	77	96.479	Macaca_mulatta
ENSMEUG00000008267	-	76	96.479	ENSMNEG00000045573	LSM14B	77	96.479	Macaca_nemestrina
ENSMEUG00000008267	-	65	94.949	ENSMLEG00000040895	LSM14B	74	94.949	Mandrillus_leucophaeus
ENSMEUG00000008267	-	79	67.143	ENSMAMG00000024124	LSM14B	66	65.714	Mastacembelus_armatus
ENSMEUG00000008267	-	65	70.629	ENSMAMG00000020539	lsm14b	66	70.629	Mastacembelus_armatus
ENSMEUG00000008267	-	66	63.636	ENSMZEG00005026001	LSM14B	66	64.286	Maylandia_zebra
ENSMEUG00000008267	-	63	73.188	ENSMZEG00005000987	lsm14b	65	72.143	Maylandia_zebra
ENSMEUG00000008267	-	67	93.519	ENSMGAG00000005300	LSM14B	74	93.519	Meleagris_gallopavo
ENSMEUG00000008267	-	100	69.521	ENSMAUG00000020700	Lsm14b	77	96.479	Mesocricetus_auratus
ENSMEUG00000008267	-	77	97.945	ENSMICG00000014675	LSM14B	77	97.887	Microcebus_murinus
ENSMEUG00000008267	-	100	69.000	ENSMOCG00000020600	Lsm14b	77	97.887	Microtus_ochrogaster
ENSMEUG00000008267	-	67	67.143	ENSMMOG00000017321	LSM14B	70	67.143	Mola_mola
ENSMEUG00000008267	-	64	74.101	ENSMMOG00000020042	lsm14b	72	74.101	Mola_mola
ENSMEUG00000008267	-	57	99.394	ENSMODG00000016690	LSM14B	65	99.394	Monodelphis_domestica
ENSMEUG00000008267	-	64	63.971	ENSMALG00000022251	LSM14B	65	62.937	Monopterus_albus
ENSMEUG00000008267	-	70	69.784	ENSMALG00000004783	lsm14b	71	69.784	Monopterus_albus
ENSMEUG00000008267	-	77	97.945	MGP_CAROLIEiJ_G0024770	Lsm14b	77	97.887	Mus_caroli
ENSMEUG00000008267	-	76	97.887	ENSMUSG00000039108	Lsm14b	77	97.887	Mus_musculus
ENSMEUG00000008267	-	77	97.945	MGP_PahariEiJ_G0026214	Lsm14b	77	97.887	Mus_pahari
ENSMEUG00000008267	-	77	97.945	MGP_SPRETEiJ_G0025693	Lsm14b	77	97.887	Mus_spretus
ENSMEUG00000008267	-	72	89.542	ENSMPUG00000007584	LSM14B	70	89.542	Mustela_putorius_furo
ENSMEUG00000008267	-	76	96.479	ENSMLUG00000000304	LSM14B	76	93.662	Myotis_lucifugus
ENSMEUG00000008267	-	65	94.949	ENSNLEG00000015757	LSM14B	74	94.949	Nomascus_leucogenys
ENSMEUG00000008267	-	50	95.000	ENSOPRG00000000447	-	59	95.000	Ochotona_princeps
ENSMEUG00000008267	-	76	97.887	ENSODEG00000004099	LSM14B	77	97.887	Octodon_degus
ENSMEUG00000008267	-	64	73.381	ENSONIG00000020318	lsm14b	66	72.340	Oreochromis_niloticus
ENSMEUG00000008267	-	51	95.775	ENSOANG00000003370	LSM14B	74	97.826	Ornithorhynchus_anatinus
ENSMEUG00000008267	-	66	94.059	ENSOCUG00000006279	LSM14B	74	94.059	Oryctolagus_cuniculus
ENSMEUG00000008267	-	71	60.714	ENSORLG00000028353	LSM14B	65	60.432	Oryzias_latipes
ENSMEUG00000008267	-	65	71.329	ENSORLG00000013525	lsm14b	66	71.329	Oryzias_latipes
ENSMEUG00000008267	-	65	71.329	ENSORLG00020020553	lsm14b	66	71.329	Oryzias_latipes_hni
ENSMEUG00000008267	-	71	61.429	ENSORLG00015013157	LSM14B	65	61.151	Oryzias_latipes_hsok
ENSMEUG00000008267	-	65	71.329	ENSORLG00015016862	lsm14b	66	71.329	Oryzias_latipes_hsok
ENSMEUG00000008267	-	65	70.629	ENSOMEG00000023917	lsm14b	66	70.629	Oryzias_melastigma
ENSMEUG00000008267	-	77	97.945	ENSOGAG00000003915	LSM14B	72	96.053	Otolemur_garnettii
ENSMEUG00000008267	-	68	91.892	ENSOARG00000014706	LSM14B	67	94.545	Ovis_aries
ENSMEUG00000008267	-	67	90.476	ENSPPAG00000035799	LSM14B	70	90.476	Pan_paniscus
ENSMEUG00000008267	-	76	97.887	ENSPPRG00000009197	LSM14B	77	97.887	Panthera_pardus
ENSMEUG00000008267	-	76	96.479	ENSPTRG00000013696	LSM14B	77	96.479	Pan_troglodytes
ENSMEUG00000008267	-	76	96.479	ENSPANG00000011747	LSM14B	77	96.479	Papio_anubis
ENSMEUG00000008267	-	76	79.286	ENSPKIG00000003275	lsm14b	87	87.234	Paramormyrops_kingsleyae
ENSMEUG00000008267	-	66	96.078	ENSPSIG00000014762	LSM14B	74	96.078	Pelodiscus_sinensis
ENSMEUG00000008267	-	75	97.826	ENSPEMG00000017688	Lsm14b	76	97.826	Peromyscus_maniculatus_bairdii
ENSMEUG00000008267	-	79	100.000	ENSPCIG00000013405	LSM14B	80	100.000	Phascolarctos_cinereus
ENSMEUG00000008267	-	80	68.707	ENSPFOG00000005631	lsm14b	67	68.707	Poecilia_formosa
ENSMEUG00000008267	-	70	65.248	ENSPLAG00000005793	LSM14B	67	64.539	Poecilia_latipinna
ENSMEUG00000008267	-	79	69.930	ENSPLAG00000002449	lsm14b	66	69.930	Poecilia_latipinna
ENSMEUG00000008267	-	79	69.231	ENSPMEG00000000745	lsm14b	66	69.231	Poecilia_mexicana
ENSMEUG00000008267	-	67	64.286	ENSPMEG00000022953	LSM14B	67	63.571	Poecilia_mexicana
ENSMEUG00000008267	-	100	77.519	ENSPPYG00000011194	LSM14B	79	92.763	Pongo_abelii
ENSMEUG00000008267	-	76	97.887	ENSPCOG00000013625	LSM14B	77	97.887	Propithecus_coquereli
ENSMEUG00000008267	-	57	94.118	ENSPVAG00000017918	LSM14B	74	88.000	Pteropus_vampyrus
ENSMEUG00000008267	-	65	79.286	ENSPNAG00000012777	lsm14b	81	78.571	Pygocentrus_nattereri
ENSMEUG00000008267	-	77	97.260	ENSRNOG00000054557	Lsm14b	72	95.395	Rattus_norvegicus
ENSMEUG00000008267	-	66	94.231	ENSRBIG00000033461	LSM14B	73	94.000	Rhinopithecus_bieti
ENSMEUG00000008267	-	67	95.283	ENSRROG00000042949	LSM14B	67	95.283	Rhinopithecus_roxellana
ENSMEUG00000008267	-	89	62.712	ENSSBOG00000032820	LSM14B	74	94.949	Saimiri_boliviensis_boliviensis
ENSMEUG00000008267	-	69	100.000	ENSSHAG00000015528	LSM14B	75	100.000	Sarcophilus_harrisii
ENSMEUG00000008267	-	67	73.239	ENSSFOG00015004627	lsm14b	67	76.429	Scleropages_formosus
ENSMEUG00000008267	-	70	73.427	ENSSMAG00000012725	lsm14b	66	73.427	Scophthalmus_maximus
ENSMEUG00000008267	-	72	67.857	ENSSMAG00000000135	LSM14B	65	65.468	Scophthalmus_maximus
ENSMEUG00000008267	-	67	70.504	ENSSDUG00000022770	LSM14B	66	68.345	Seriola_dumerili
ENSMEUG00000008267	-	65	75.524	ENSSDUG00000020977	lsm14b	66	75.524	Seriola_dumerili
ENSMEUG00000008267	-	76	96.503	ENSSPUG00000014360	LSM14B	72	94.631	Sphenodon_punctatus
ENSMEUG00000008267	-	70	74.126	ENSSPAG00000020915	lsm14b	70	74.126	Stegastes_partitus
ENSMEUG00000008267	-	77	97.260	ENSSSCG00000026052	LSM14B	69	94.771	Sus_scrofa
ENSMEUG00000008267	-	66	98.039	ENSTGUG00000007884	LSM14B	74	98.039	Taeniopygia_guttata
ENSMEUG00000008267	-	66	66.667	ENSTRUG00000001529	LSM14B	65	65.248	Takifugu_rubripes
ENSMEUG00000008267	-	79	74.306	ENSTRUG00000011354	lsm14b	66	74.306	Takifugu_rubripes
ENSMEUG00000008267	-	71	73.611	ENSTNIG00000002445	lsm14b	69	72.789	Tetraodon_nigroviridis
ENSMEUG00000008267	-	68	100.000	ENSTTRG00000011043	LSM14B	63	100.000	Tursiops_truncatus
ENSMEUG00000008267	-	77	89.506	ENSUAMG00000025298	LSM14B	75	88.889	Ursus_americanus
ENSMEUG00000008267	-	77	89.506	ENSUMAG00000000480	LSM14B	75	88.889	Ursus_maritimus
ENSMEUG00000008267	-	66	95.098	ENSVVUG00000015920	LSM14B	73	95.098	Vulpes_vulpes
ENSMEUG00000008267	-	61	90.647	ENSXETG00000001997	lsm14b	72	90.647	Xenopus_tropicalis
ENSMEUG00000008267	-	69	68.794	ENSXMAG00000010013	lsm14b	65	68.794	Xiphophorus_maculatus