EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000008741 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 21585 bases
Position: chrGeneScaffold_1510:8351-29935
Accession: 10765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000007999	PRP21_like_P	PF12230.8	6.2e-49	1	1
ENSMEUP00000007999	Surp	PF01805.20	3.5e-46	1	2
ENSMEUP00000007999	Surp	PF01805.20	3.5e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000008779	SF3A1-201	2268	-	ENSMEUP00000007999	756 (aa)	-	UPI0001B201B2

Gene Model

Click here to download ENSMEUG00000008741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000008741's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000008741	SF3A1	100	87.632	ENSG00000099995	SF3A1	100	92.063	Homo_sapiens
ENSMEUG00000008741	SF3A1	97	87.636	ENSAMEG00000007737	SF3A1	93	87.752	Ailuropoda_melanoleuca
ENSMEUG00000008741	SF3A1	95	86.030	ENSAPLG00000009057	SF3A1	95	85.598	Anas_platyrhynchos
ENSMEUG00000008741	SF3A1	100	79.177	ENSACAG00000009415	SF3A1	96	79.049	Anolis_carolinensis
ENSMEUG00000008741	SF3A1	100	88.158	ENSANAG00000032045	SF3A1	96	88.158	Aotus_nancymaae
ENSMEUG00000008741	SF3A1	100	75.789	ENSACLG00000012622	sf3a1	94	76.735	Astatotilapia_calliptera
ENSMEUG00000008741	SF3A1	99	75.165	ENSAMXG00000005382	sf3a1	94	77.446	Astyanax_mexicanus
ENSMEUG00000008741	SF3A1	100	88.158	ENSBTAG00000003390	SF3A1	96	88.158	Bos_taurus
ENSMEUG00000008741	SF3A1	83	42.370	WBGene00004188	prp-21	53	48.797	Caenorhabditis_elegans
ENSMEUG00000008741	SF3A1	100	88.158	ENSCJAG00000010370	SF3A1	96	88.158	Callithrix_jacchus
ENSMEUG00000008741	SF3A1	100	87.895	ENSCAFG00000012559	SF3A1	96	87.895	Canis_familiaris
ENSMEUG00000008741	SF3A1	100	87.895	ENSCAFG00020000838	SF3A1	96	87.895	Canis_lupus_dingo
ENSMEUG00000008741	SF3A1	100	88.026	ENSCHIG00000018642	SF3A1	96	88.026	Capra_hircus
ENSMEUG00000008741	SF3A1	100	88.158	ENSTSYG00000004739	SF3A1	96	88.158	Carlito_syrichta
ENSMEUG00000008741	SF3A1	96	76.511	ENSCAPG00000015414	SF3A1	96	77.747	Cavia_aperea
ENSMEUG00000008741	SF3A1	100	88.158	ENSCPOG00000014589	SF3A1	96	88.158	Cavia_porcellus
ENSMEUG00000008741	SF3A1	100	88.158	ENSCCAG00000032006	SF3A1	96	88.158	Cebus_capucinus
ENSMEUG00000008741	SF3A1	100	88.026	ENSCATG00000029241	SF3A1	96	88.026	Cercocebus_atys
ENSMEUG00000008741	SF3A1	100	87.763	ENSCLAG00000006508	SF3A1	96	87.763	Chinchilla_lanigera
ENSMEUG00000008741	SF3A1	100	87.895	ENSCSAG00000009470	SF3A1	96	87.895	Chlorocebus_sabaeus
ENSMEUG00000008741	SF3A1	61	98.095	ENSCHOG00000005201	SF3A1	66	98.095	Choloepus_hoffmanni
ENSMEUG00000008741	SF3A1	100	82.872	ENSCPBG00000007595	SF3A1	96	83.004	Chrysemys_picta_bellii
ENSMEUG00000008741	SF3A1	94	47.850	ENSCING00000008526	-	94	47.767	Ciona_intestinalis
ENSMEUG00000008741	SF3A1	88	63.051	ENSCSAVG00000005608	-	87	60.000	Ciona_savignyi
ENSMEUG00000008741	SF3A1	100	87.895	ENSCANG00000033564	SF3A1	96	87.895	Colobus_angolensis_palliatus
ENSMEUG00000008741	SF3A1	100	87.368	ENSCGRG00001008933	Sf3a1	96	87.632	Cricetulus_griseus_chok1gshd
ENSMEUG00000008741	SF3A1	100	87.368	ENSCGRG00000006127	Sf3a1	96	87.632	Cricetulus_griseus_crigri
ENSMEUG00000008741	SF3A1	100	73.753	ENSCSEG00000010792	sf3a1	93	74.185	Cynoglossus_semilaevis
ENSMEUG00000008741	SF3A1	100	75.296	ENSCVAG00000004560	sf3a1	94	75.134	Cyprinodon_variegatus
ENSMEUG00000008741	SF3A1	50	75.853	ENSDARG00000041887	sf3a1	90	86.792	Danio_rerio
ENSMEUG00000008741	SF3A1	97	87.618	ENSDNOG00000010629	SF3A1	96	87.402	Dasypus_novemcinctus
ENSMEUG00000008741	SF3A1	100	88.289	ENSDORG00000005613	Sf3a1	96	88.289	Dipodomys_ordii
ENSMEUG00000008741	SF3A1	88	85.180	ENSETEG00000017194	SF3A1	100	83.618	Echinops_telfairi
ENSMEUG00000008741	SF3A1	100	60.099	ENSEBUG00000001285	sf3a1	91	62.047	Eptatretus_burgeri
ENSMEUG00000008741	SF3A1	100	88.158	ENSEASG00005010254	SF3A1	96	88.158	Equus_asinus_asinus
ENSMEUG00000008741	SF3A1	100	88.158	ENSECAG00000023962	SF3A1	96	88.158	Equus_caballus
ENSMEUG00000008741	SF3A1	76	91.522	ENSEEUG00000003159	SF3A1	82	91.379	Erinaceus_europaeus
ENSMEUG00000008741	SF3A1	100	74.084	ENSELUG00000022578	sf3a1	97	74.297	Esox_lucius
ENSMEUG00000008741	SF3A1	100	88.026	ENSFCAG00000011932	SF3A1	96	88.026	Felis_catus
ENSMEUG00000008741	SF3A1	95	85.042	ENSFALG00000006944	SF3A1	96	84.190	Ficedula_albicollis
ENSMEUG00000008741	SF3A1	100	87.895	ENSFDAG00000009560	SF3A1	96	87.895	Fukomys_damarensis
ENSMEUG00000008741	SF3A1	100	75.164	ENSFHEG00000010866	sf3a1	94	75.610	Fundulus_heteroclitus
ENSMEUG00000008741	SF3A1	100	72.739	ENSGMOG00000016024	sf3a1	93	73.713	Gadus_morhua
ENSMEUG00000008741	SF3A1	95	86.150	ENSGALG00000007937	SF3A1	96	84.848	Gallus_gallus
ENSMEUG00000008741	SF3A1	100	74.770	ENSGAFG00000009111	sf3a1	94	75.068	Gambusia_affinis
ENSMEUG00000008741	SF3A1	100	73.913	ENSGACG00000011893	sf3a1	93	74.932	Gasterosteus_aculeatus
ENSMEUG00000008741	SF3A1	100	84.190	ENSGAGG00000000762	SF3A1	99	83.136	Gopherus_agassizii
ENSMEUG00000008741	SF3A1	100	87.632	ENSGGOG00000012631	SF3A1	96	87.632	Gorilla_gorilla
ENSMEUG00000008741	SF3A1	100	75.789	ENSHBUG00000015795	sf3a1	94	76.735	Haplochromis_burtoni
ENSMEUG00000008741	SF3A1	100	88.158	ENSHGLG00000007907	SF3A1	96	88.158	Heterocephalus_glaber_female
ENSMEUG00000008741	SF3A1	100	88.158	ENSHGLG00100013799	SF3A1	96	88.158	Heterocephalus_glaber_male
ENSMEUG00000008741	SF3A1	100	72.966	ENSHCOG00000015423	sf3a1	94	73.978	Hippocampus_comes
ENSMEUG00000008741	SF3A1	96	74.251	ENSIPUG00000002470	sf3a1	94	75.204	Ictalurus_punctatus
ENSMEUG00000008741	SF3A1	100	88.421	ENSSTOG00000013892	SF3A1	96	88.421	Ictidomys_tridecemlineatus
ENSMEUG00000008741	SF3A1	100	88.173	ENSJJAG00000022566	Sf3a1	96	88.173	Jaculus_jaculus
ENSMEUG00000008741	SF3A1	100	74.770	ENSKMAG00000002400	sf3a1	94	75.339	Kryptolebias_marmoratus
ENSMEUG00000008741	SF3A1	50	76.115	ENSLBEG00000022974	sf3a1	94	75.815	Labrus_bergylta
ENSMEUG00000008741	SF3A1	100	78.740	ENSLACG00000003565	SF3A1	95	79.706	Latimeria_chalumnae
ENSMEUG00000008741	SF3A1	100	76.802	ENSLOCG00000008251	sf3a1	93	78.940	Lepisosteus_oculatus
ENSMEUG00000008741	SF3A1	100	87.895	ENSLAFG00000000448	SF3A1	96	87.895	Loxodonta_africana
ENSMEUG00000008741	SF3A1	97	53.369	ENSLAFG00000026032	-	92	54.484	Loxodonta_africana
ENSMEUG00000008741	SF3A1	100	87.763	ENSMFAG00000031979	SF3A1	96	87.763	Macaca_fascicularis
ENSMEUG00000008741	SF3A1	100	87.763	ENSMMUG00000005547	SF3A1	96	87.763	Macaca_mulatta
ENSMEUG00000008741	SF3A1	100	87.632	ENSMNEG00000037229	SF3A1	96	87.632	Macaca_nemestrina
ENSMEUG00000008741	SF3A1	100	87.895	ENSMLEG00000041908	SF3A1	96	87.895	Mandrillus_leucophaeus
ENSMEUG00000008741	SF3A1	91	80.442	ENSMAMG00000006460	sf3a1	96	73.082	Mastacembelus_armatus
ENSMEUG00000008741	SF3A1	100	75.789	ENSMZEG00005009633	sf3a1	94	76.735	Maylandia_zebra
ENSMEUG00000008741	SF3A1	95	86.150	ENSMGAG00000001330	SF3A1	95	85.714	Meleagris_gallopavo
ENSMEUG00000008741	SF3A1	92	83.452	ENSMAUG00000020317	Sf3a1	90	83.452	Mesocricetus_auratus
ENSMEUG00000008741	SF3A1	100	87.895	ENSMICG00000010038	SF3A1	96	87.895	Microcebus_murinus
ENSMEUG00000008741	SF3A1	100	87.763	ENSMOCG00000008438	Sf3a1	96	87.763	Microtus_ochrogaster
ENSMEUG00000008741	SF3A1	100	72.405	ENSMMOG00000015588	sf3a1	93	74.049	Mola_mola
ENSMEUG00000008741	SF3A1	100	89.710	ENSMODG00000009270	SF3A1	96	89.710	Monodelphis_domestica
ENSMEUG00000008741	SF3A1	100	75.658	ENSMALG00000000148	sf3a1	94	76.320	Monopterus_albus
ENSMEUG00000008741	SF3A1	100	86.974	MGP_CAROLIEiJ_G0016029	Sf3a1	94	87.097	Mus_caroli
ENSMEUG00000008741	SF3A1	100	86.974	ENSMUSG00000002129	Sf3a1	94	87.097	Mus_musculus
ENSMEUG00000008741	SF3A1	100	86.842	MGP_PahariEiJ_G0016862	Sf3a1	94	86.962	Mus_pahari
ENSMEUG00000008741	SF3A1	100	86.974	MGP_SPRETEiJ_G0016870	Sf3a1	94	87.097	Mus_spretus
ENSMEUG00000008741	SF3A1	100	88.158	ENSMPUG00000013144	SF3A1	96	88.158	Mustela_putorius_furo
ENSMEUG00000008741	SF3A1	100	88.289	ENSMLUG00000002139	SF3A1	96	88.289	Myotis_lucifugus
ENSMEUG00000008741	SF3A1	100	87.895	ENSNGAG00000016977	Sf3a1	96	87.895	Nannospalax_galili
ENSMEUG00000008741	SF3A1	100	75.789	ENSNBRG00000016642	sf3a1	92	77.548	Neolamprologus_brichardi
ENSMEUG00000008741	SF3A1	100	87.895	ENSNLEG00000003686	SF3A1	96	87.895	Nomascus_leucogenys
ENSMEUG00000008741	SF3A1	97	87.364	ENSOPRG00000016636	SF3A1	96	87.632	Ochotona_princeps
ENSMEUG00000008741	SF3A1	100	87.879	ENSODEG00000002571	SF3A1	96	87.879	Octodon_degus
ENSMEUG00000008741	SF3A1	100	75.457	ENSONIG00000010848	sf3a1	94	76.495	Oreochromis_niloticus
ENSMEUG00000008741	SF3A1	100	87.895	ENSOCUG00000007633	SF3A1	96	87.895	Oryctolagus_cuniculus
ENSMEUG00000008741	SF3A1	50	75.862	ENSORLG00000013050	sf3a1	97	76.955	Oryzias_latipes
ENSMEUG00000008741	SF3A1	100	75.297	ENSORLG00020003236	sf3a1	92	76.955	Oryzias_latipes_hni
ENSMEUG00000008741	SF3A1	100	75.297	ENSORLG00015017411	sf3a1	93	76.955	Oryzias_latipes_hsok
ENSMEUG00000008741	SF3A1	50	75.000	ENSOMEG00000013362	sf3a1	94	75.782	Oryzias_melastigma
ENSMEUG00000008741	SF3A1	100	87.763	ENSOGAG00000012931	SF3A1	96	87.763	Otolemur_garnettii
ENSMEUG00000008741	SF3A1	100	85.921	ENSOARG00000006849	SF3A1	96	85.921	Ovis_aries
ENSMEUG00000008741	SF3A1	100	86.579	ENSPPAG00000041790	SF3A1	96	86.579	Pan_paniscus
ENSMEUG00000008741	SF3A1	100	88.026	ENSPPRG00000004391	SF3A1	96	88.026	Panthera_pardus
ENSMEUG00000008741	SF3A1	97	87.821	ENSPTIG00000000844	SF3A1	95	87.772	Panthera_tigris_altaica
ENSMEUG00000008741	SF3A1	100	87.632	ENSPTRG00000014240	SF3A1	96	87.632	Pan_troglodytes
ENSMEUG00000008741	SF3A1	100	87.895	ENSPANG00000020772	SF3A1	96	87.895	Papio_anubis
ENSMEUG00000008741	SF3A1	81	94.828	ENSPSIG00000012803	SF3A1	95	94.828	Pelodiscus_sinensis
ENSMEUG00000008741	SF3A1	96	74.760	ENSPMGG00000023096	sf3a1	96	75.890	Periophthalmus_magnuspinnatus
ENSMEUG00000008741	SF3A1	100	87.500	ENSPEMG00000009494	Sf3a1	96	87.763	Peromyscus_maniculatus_bairdii
ENSMEUG00000008741	SF3A1	72	70.417	ENSPMAG00000007139	-	89	72.106	Petromyzon_marinus
ENSMEUG00000008741	SF3A1	100	89.578	ENSPCIG00000022692	SF3A1	96	89.578	Phascolarctos_cinereus
ENSMEUG00000008741	SF3A1	100	65.966	ENSPFOG00000016768	sf3a1	89	68.946	Poecilia_formosa
ENSMEUG00000008741	SF3A1	100	74.639	ENSPLAG00000017268	sf3a1	94	74.661	Poecilia_latipinna
ENSMEUG00000008741	SF3A1	96	74.960	ENSPMEG00000019811	sf3a1	93	74.326	Poecilia_mexicana
ENSMEUG00000008741	SF3A1	100	74.901	ENSPREG00000010347	sf3a1	94	74.932	Poecilia_reticulata
ENSMEUG00000008741	SF3A1	100	87.895	ENSPPYG00000011707	SF3A1	96	87.895	Pongo_abelii
ENSMEUG00000008741	SF3A1	100	88.026	ENSPCOG00000026630	SF3A1	96	88.026	Propithecus_coquereli
ENSMEUG00000008741	SF3A1	100	83.553	ENSPVAG00000017719	SF3A1	90	86.376	Pteropus_vampyrus
ENSMEUG00000008741	SF3A1	100	75.789	ENSPNYG00000018706	sf3a1	94	76.735	Pundamilia_nyererei
ENSMEUG00000008741	SF3A1	98	74.567	ENSPNAG00000003721	sf3a1	95	76.178	Pygocentrus_nattereri
ENSMEUG00000008741	SF3A1	97	87.179	ENSRNOG00000005218	Sf3a1	94	87.500	Rattus_norvegicus
ENSMEUG00000008741	SF3A1	100	87.895	ENSRBIG00000032167	SF3A1	96	87.895	Rhinopithecus_bieti
ENSMEUG00000008741	SF3A1	100	87.895	ENSRROG00000044908	SF3A1	96	87.895	Rhinopithecus_roxellana
ENSMEUG00000008741	SF3A1	92	87.286	ENSSBOG00000021960	SF3A1	94	86.414	Saimiri_boliviensis_boliviensis
ENSMEUG00000008741	SF3A1	99	85.430	ENSSHAG00000003666	SF3A1	94	86.856	Sarcophilus_harrisii
ENSMEUG00000008741	SF3A1	100	75.654	ENSSFOG00015004579	sf3a1	94	76.707	Scleropages_formosus
ENSMEUG00000008741	SF3A1	100	73.351	ENSSMAG00000004275	sf3a1	94	74.114	Scophthalmus_maximus
ENSMEUG00000008741	SF3A1	100	75.296	ENSSDUG00000022219	sf3a1	94	76.087	Seriola_dumerili
ENSMEUG00000008741	SF3A1	100	75.296	ENSSLDG00000012642	sf3a1	94	76.087	Seriola_lalandi_dorsalis
ENSMEUG00000008741	SF3A1	97	84.303	ENSSARG00000005960	SF3A1	95	84.239	Sorex_araneus
ENSMEUG00000008741	SF3A1	96	84.282	ENSSPUG00000018863	SF3A1	93	84.913	Sphenodon_punctatus
ENSMEUG00000008741	SF3A1	50	77.690	ENSSPAG00000011856	sf3a1	94	76.630	Stegastes_partitus
ENSMEUG00000008741	SF3A1	100	88.158	ENSSSCG00000010002	SF3A1	99	85.754	Sus_scrofa
ENSMEUG00000008741	SF3A1	95	86.050	ENSTGUG00000010547	SF3A1	96	85.617	Taeniopygia_guttata
ENSMEUG00000008741	SF3A1	100	73.062	ENSTRUG00000006118	sf3a1	94	73.954	Takifugu_rubripes
ENSMEUG00000008741	SF3A1	100	87.105	ENSTBEG00000012771	SF3A1	96	87.105	Tupaia_belangeri
ENSMEUG00000008741	SF3A1	100	87.254	ENSTTRG00000001535	SF3A1	96	87.648	Tursiops_truncatus
ENSMEUG00000008741	SF3A1	100	87.632	ENSUAMG00000006750	SF3A1	96	87.632	Ursus_americanus
ENSMEUG00000008741	SF3A1	99	86.170	ENSUMAG00000016665	SF3A1	94	87.500	Ursus_maritimus
ENSMEUG00000008741	SF3A1	100	87.895	ENSVVUG00000003075	SF3A1	96	87.895	Vulpes_vulpes
ENSMEUG00000008741	SF3A1	100	77.457	ENSXETG00000016144	sf3a1	89	82.456	Xenopus_tropicalis
ENSMEUG00000008741	SF3A1	100	74.507	ENSXCOG00000015653	sf3a1	93	75.410	Xiphophorus_couchianus
ENSMEUG00000008741	SF3A1	100	74.639	ENSXMAG00000002753	sf3a1	94	75.546	Xiphophorus_maculatus