EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMEUG00000008819 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 65161 bases
Position: chrGeneScaffold_1819:7473-72633
Accession: 11097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000008067	ResIII	PF04851.15	2.3e-11	1	1
ENSMEUP00000008067	DEAD	PF00270.29	9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000008853	SMARCA1-201	2856	-	ENSMEUP00000008067	952 (aa)	-	UPI0001B21FE0

Gene Model

Click here to download ENSMEUG00000008819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000008819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMEUG00000008819	SMARCA1	88	91.818	ENSMEUG00000001267	SMARCA5	85	91.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000008819	SMARCA1	99	82.019	ENSG00000102038	SMARCA1	90	82.038	Homo_sapiens
ENSMEUG00000008819	SMARCA1	97	76.319	ENSAPOG00000016035	smarca5	92	76.009	Acanthochromis_polyacanthus
ENSMEUG00000008819	SMARCA1	99	81.703	ENSAMEG00000015218	SMARCA1	89	81.723	Ailuropoda_melanoleuca
ENSMEUG00000008819	SMARCA1	90	76.285	ENSACIG00000016982	smarca5	93	76.325	Amphilophus_citrinellus
ENSMEUG00000008819	SMARCA1	97	76.319	ENSAOCG00000015578	smarca5	89	75.936	Amphiprion_ocellaris
ENSMEUG00000008819	SMARCA1	97	76.319	ENSAPEG00000011117	smarca5	93	75.531	Amphiprion_percula
ENSMEUG00000008819	SMARCA1	97	76.211	ENSATEG00000012894	smarca5	89	76.211	Anabas_testudineus
ENSMEUG00000008819	SMARCA1	98	86.081	ENSAPLG00000013149	SMARCA1	94	86.081	Anas_platyrhynchos
ENSMEUG00000008819	SMARCA1	100	85.924	ENSACAG00000011376	SMARCA1	90	85.924	Anolis_carolinensis
ENSMEUG00000008819	SMARCA1	99	76.761	ENSANAG00000023098	SMARCA1	89	76.786	Aotus_nancymaae
ENSMEUG00000008819	SMARCA1	97	76.749	ENSACLG00000025356	smarca5	88	76.749	Astatotilapia_calliptera
ENSMEUG00000008819	SMARCA1	93	81.890	ENSAMXG00000011227	smarca1	95	81.890	Astyanax_mexicanus
ENSMEUG00000008819	SMARCA1	98	76.882	ENSAMXG00000005709	smarca5	89	76.882	Astyanax_mexicanus
ENSMEUG00000008819	SMARCA1	99	81.598	ENSBTAG00000002292	SMARCA1	91	81.618	Bos_taurus
ENSMEUG00000008819	SMARCA1	99	56.594	WBGene00002169	isw-1	93	56.594	Caenorhabditis_elegans
ENSMEUG00000008819	SMARCA1	99	82.019	ENSCJAG00000002868	SMARCA1	89	82.038	Callithrix_jacchus
ENSMEUG00000008819	SMARCA1	99	72.623	ENSCAFG00000018673	SMARCA1	93	71.322	Canis_familiaris
ENSMEUG00000008819	SMARCA1	99	82.124	ENSCAFG00020001751	SMARCA1	89	82.143	Canis_lupus_dingo
ENSMEUG00000008819	SMARCA1	99	81.703	ENSCHIG00000009837	SMARCA1	90	81.723	Capra_hircus
ENSMEUG00000008819	SMARCA1	100	81.828	ENSTSYG00000004240	SMARCA1	94	81.381	Carlito_syrichta
ENSMEUG00000008819	SMARCA1	99	81.493	ENSCPOG00000013601	SMARCA1	84	88.961	Cavia_porcellus
ENSMEUG00000008819	SMARCA1	99	78.864	ENSCCAG00000030817	SMARCA1	89	78.887	Cebus_capucinus
ENSMEUG00000008819	SMARCA1	99	82.019	ENSCATG00000015921	SMARCA1	90	82.038	Cercocebus_atys
ENSMEUG00000008819	SMARCA1	99	81.388	ENSCLAG00000002171	SMARCA1	90	81.408	Chinchilla_lanigera
ENSMEUG00000008819	SMARCA1	99	82.019	ENSCSAG00000008460	SMARCA1	89	82.038	Chlorocebus_sabaeus
ENSMEUG00000008819	SMARCA1	100	86.975	ENSCPBG00000001146	SMARCA1	87	95.612	Chrysemys_picta_bellii
ENSMEUG00000008819	SMARCA1	99	65.859	ENSCING00000004110	swi/snf	92	65.859	Ciona_intestinalis
ENSMEUG00000008819	SMARCA1	99	65.859	ENSCSAVG00000004620	-	98	65.506	Ciona_savignyi
ENSMEUG00000008819	SMARCA1	99	81.914	ENSCANG00000007183	SMARCA1	89	81.933	Colobus_angolensis_palliatus
ENSMEUG00000008819	SMARCA1	99	80.907	ENSCGRG00001010776	Smarca1	90	80.672	Cricetulus_griseus_chok1gshd
ENSMEUG00000008819	SMARCA1	100	80.462	ENSCGRG00000015301	Smarca1	94	80.462	Cricetulus_griseus_crigri
ENSMEUG00000008819	SMARCA1	97	76.103	ENSCSEG00000000328	smarca5	89	76.103	Cynoglossus_semilaevis
ENSMEUG00000008819	SMARCA1	97	75.996	ENSCVAG00000008668	smarca5	93	75.312	Cyprinodon_variegatus
ENSMEUG00000008819	SMARCA1	99	74.842	ENSDARG00000052348	smarca5	90	74.842	Danio_rerio
ENSMEUG00000008819	SMARCA1	99	79.363	ENSDARG00000012776	smarca1	93	79.363	Danio_rerio
ENSMEUG00000008819	SMARCA1	100	81.303	ENSDNOG00000004315	SMARCA1	91	81.303	Dasypus_novemcinctus
ENSMEUG00000008819	SMARCA1	100	80.987	ENSDORG00000009270	Smarca1	90	80.987	Dipodomys_ordii
ENSMEUG00000008819	SMARCA1	99	66.173	FBgn0011604	Iswi	90	66.173	Drosophila_melanogaster
ENSMEUG00000008819	SMARCA1	83	88.393	ENSETEG00000017426	SMARCA1	81	88.393	Echinops_telfairi
ENSMEUG00000008819	SMARCA1	99	74.211	ENSEBUG00000001239	smarca5	92	74.211	Eptatretus_burgeri
ENSMEUG00000008819	SMARCA1	91	97.273	ENSEASG00005008218	SMARCA1	88	97.273	Equus_asinus_asinus
ENSMEUG00000008819	SMARCA1	99	82.019	ENSECAG00000012106	SMARCA1	89	82.038	Equus_caballus
ENSMEUG00000008819	SMARCA1	80	91.391	ENSEEUG00000014927	SMARCA1	78	91.391	Erinaceus_europaeus
ENSMEUG00000008819	SMARCA1	99	80.733	ENSELUG00000010515	smarca1	92	80.733	Esox_lucius
ENSMEUG00000008819	SMARCA1	100	81.828	ENSFCAG00000018496	SMARCA1	89	81.828	Felis_catus
ENSMEUG00000008819	SMARCA1	97	85.390	ENSFALG00000000209	SMARCA1	98	85.390	Ficedula_albicollis
ENSMEUG00000008819	SMARCA1	100	81.828	ENSFDAG00000009818	SMARCA1	93	81.828	Fukomys_damarensis
ENSMEUG00000008819	SMARCA1	98	76.150	ENSFHEG00000007687	smarca5	91	76.125	Fundulus_heteroclitus
ENSMEUG00000008819	SMARCA1	100	85.924	ENSGALG00000008431	SMARCA1	93	85.924	Gallus_gallus
ENSMEUG00000008819	SMARCA1	98	76.364	ENSGAFG00000017731	smarca5	89	76.364	Gambusia_affinis
ENSMEUG00000008819	SMARCA1	97	86.905	ENSGAGG00000023575	SMARCA1	94	86.905	Gopherus_agassizii
ENSMEUG00000008819	SMARCA1	78	91.667	ENSGGOG00000012841	-	95	79.444	Gorilla_gorilla
ENSMEUG00000008819	SMARCA1	99	80.967	ENSHGLG00000003080	SMARCA1	90	80.987	Heterocephalus_glaber_female
ENSMEUG00000008819	SMARCA1	99	81.170	ENSHGLG00100001102	SMARCA1	95	87.987	Heterocephalus_glaber_male
ENSMEUG00000008819	SMARCA1	97	76.426	ENSHCOG00000005458	smarca5	89	76.150	Hippocampus_comes
ENSMEUG00000008819	SMARCA1	99	75.448	ENSIPUG00000005229	SMARCA5	92	75.448	Ictalurus_punctatus
ENSMEUG00000008819	SMARCA1	99	80.588	ENSIPUG00000016905	Smarca1	94	80.810	Ictalurus_punctatus
ENSMEUG00000008819	SMARCA1	100	82.143	ENSSTOG00000014524	SMARCA1	90	81.933	Ictidomys_tridecemlineatus
ENSMEUG00000008819	SMARCA1	100	81.197	ENSJJAG00000002593	Smarca1	90	81.197	Jaculus_jaculus
ENSMEUG00000008819	SMARCA1	97	76.211	ENSKMAG00000003777	smarca5	89	75.936	Kryptolebias_marmoratus
ENSMEUG00000008819	SMARCA1	99	75.796	ENSLBEG00000013295	SMARCA1	98	75.095	Labrus_bergylta
ENSMEUG00000008819	SMARCA1	99	75.796	ENSLBEG00000018112	smarca5	89	75.796	Labrus_bergylta
ENSMEUG00000008819	SMARCA1	100	84.349	ENSLACG00000016697	SMARCA1	92	84.349	Latimeria_chalumnae
ENSMEUG00000008819	SMARCA1	100	83.106	ENSLOCG00000014591	smarca1	92	83.106	Lepisosteus_oculatus
ENSMEUG00000008819	SMARCA1	100	81.524	ENSLAFG00000000896	SMARCA1	96	81.230	Loxodonta_africana
ENSMEUG00000008819	SMARCA1	100	81.866	ENSMFAG00000002117	SMARCA1	94	81.866	Macaca_fascicularis
ENSMEUG00000008819	SMARCA1	99	82.019	ENSMMUG00000008818	SMARCA1	95	82.416	Macaca_mulatta
ENSMEUG00000008819	SMARCA1	100	81.866	ENSMNEG00000041768	SMARCA1	94	81.866	Macaca_nemestrina
ENSMEUG00000008819	SMARCA1	99	82.019	ENSMLEG00000043198	SMARCA1	89	82.038	Mandrillus_leucophaeus
ENSMEUG00000008819	SMARCA1	97	76.319	ENSMAMG00000014294	smarca5	88	76.319	Mastacembelus_armatus
ENSMEUG00000008819	SMARCA1	97	76.749	ENSMZEG00005009369	smarca5	88	76.749	Maylandia_zebra
ENSMEUG00000008819	SMARCA1	100	86.029	ENSMGAG00000007042	SMARCA1	94	86.029	Meleagris_gallopavo
ENSMEUG00000008819	SMARCA1	99	81.118	ENSMAUG00000008133	Smarca1	90	80.882	Mesocricetus_auratus
ENSMEUG00000008819	SMARCA1	100	82.353	ENSMICG00000015768	SMARCA1	89	82.353	Microcebus_murinus
ENSMEUG00000008819	SMARCA1	99	81.224	ENSMOCG00000009464	Smarca1	90	80.987	Microtus_ochrogaster
ENSMEUG00000008819	SMARCA1	97	74.596	ENSMMOG00000005547	smarca5	92	74.596	Mola_mola
ENSMEUG00000008819	SMARCA1	100	88.340	ENSMODG00000013187	-	91	88.340	Monodelphis_domestica
ENSMEUG00000008819	SMARCA1	97	75.996	ENSMALG00000002081	smarca5	92	75.294	Monopterus_albus
ENSMEUG00000008819	SMARCA1	99	80.902	MGP_CAROLIEiJ_G0033034	Smarca1	92	83.310	Mus_caroli
ENSMEUG00000008819	SMARCA1	99	81.007	ENSMUSG00000031099	Smarca1	92	83.451	Mus_musculus
ENSMEUG00000008819	SMARCA1	99	80.902	MGP_PahariEiJ_G0031579	Smarca1	92	83.310	Mus_pahari
ENSMEUG00000008819	SMARCA1	99	81.007	MGP_SPRETEiJ_G0034192	Smarca1	92	83.451	Mus_spretus
ENSMEUG00000008819	SMARCA1	99	81.914	ENSMPUG00000017423	SMARCA1	84	81.933	Mustela_putorius_furo
ENSMEUG00000008819	SMARCA1	100	80.398	ENSMLUG00000029614	SMARCA1	89	80.398	Myotis_lucifugus
ENSMEUG00000008819	SMARCA1	99	81.857	ENSNGAG00000006492	Smarca1	90	81.857	Nannospalax_galili
ENSMEUG00000008819	SMARCA1	97	76.749	ENSNBRG00000004463	smarca5	92	76.749	Neolamprologus_brichardi
ENSMEUG00000008819	SMARCA1	100	81.152	ENSNLEG00000015179	SMARCA1	94	81.152	Nomascus_leucogenys
ENSMEUG00000008819	SMARCA1	100	82.038	ENSODEG00000012163	SMARCA1	90	82.038	Octodon_degus
ENSMEUG00000008819	SMARCA1	97	76.749	ENSONIG00000009993	smarca5	88	76.749	Oreochromis_niloticus
ENSMEUG00000008819	SMARCA1	97	87.879	ENSOANG00000002862	SMARCA1	94	87.879	Ornithorhynchus_anatinus
ENSMEUG00000008819	SMARCA1	99	81.598	ENSOCUG00000001047	SMARCA1	89	81.618	Oryctolagus_cuniculus
ENSMEUG00000008819	SMARCA1	97	76.642	ENSORLG00000021998	smarca5	89	76.364	Oryzias_latipes
ENSMEUG00000008819	SMARCA1	97	76.534	ENSORLG00020017679	smarca5	89	76.257	Oryzias_latipes_hni
ENSMEUG00000008819	SMARCA1	97	76.642	ENSORLG00015017210	smarca5	88	76.642	Oryzias_latipes_hsok
ENSMEUG00000008819	SMARCA1	97	76.642	ENSOMEG00000000086	smarca5	88	76.642	Oryzias_melastigma
ENSMEUG00000008819	SMARCA1	99	82.334	ENSOGAG00000004399	SMARCA1	90	82.353	Otolemur_garnettii
ENSMEUG00000008819	SMARCA1	100	81.637	ENSOARG00000014638	SMARCA1	94	82.189	Ovis_aries
ENSMEUG00000008819	SMARCA1	99	82.019	ENSPPAG00000034647	SMARCA1	89	82.038	Pan_paniscus
ENSMEUG00000008819	SMARCA1	100	82.038	ENSPPRG00000008929	SMARCA1	89	82.038	Panthera_pardus
ENSMEUG00000008819	SMARCA1	100	81.191	ENSPTIG00000000915	SMARCA1	92	81.191	Panthera_tigris_altaica
ENSMEUG00000008819	SMARCA1	99	82.019	ENSPTRG00000049876	SMARCA1	90	82.038	Pan_troglodytes
ENSMEUG00000008819	SMARCA1	99	82.019	ENSPANG00000003871	SMARCA1	89	82.038	Papio_anubis
ENSMEUG00000008819	SMARCA1	99	79.237	ENSPKIG00000013411	smarca1	94	79.237	Paramormyrops_kingsleyae
ENSMEUG00000008819	SMARCA1	100	86.870	ENSPSIG00000010101	SMARCA1	94	86.905	Pelodiscus_sinensis
ENSMEUG00000008819	SMARCA1	99	81.540	ENSPEMG00000017503	Smarca1	90	81.540	Peromyscus_maniculatus_bairdii
ENSMEUG00000008819	SMARCA1	100	89.076	ENSPCIG00000015460	SMARCA1	93	89.076	Phascolarctos_cinereus
ENSMEUG00000008819	SMARCA1	97	76.534	ENSPFOG00000007649	smarca5	89	76.534	Poecilia_formosa
ENSMEUG00000008819	SMARCA1	97	76.534	ENSPLAG00000003363	smarca5	89	76.534	Poecilia_latipinna
ENSMEUG00000008819	SMARCA1	97	76.642	ENSPMEG00000019849	smarca5	89	76.642	Poecilia_mexicana
ENSMEUG00000008819	SMARCA1	97	76.642	ENSPREG00000023250	smarca5	89	76.642	Poecilia_reticulata
ENSMEUG00000008819	SMARCA1	99	79.075	ENSPPYG00000020703	SMARCA1	89	79.097	Pongo_abelii
ENSMEUG00000008819	SMARCA1	79	77.309	ENSPCOG00000020722	SMARCA1	94	80.231	Propithecus_coquereli
ENSMEUG00000008819	SMARCA1	94	80.921	ENSPVAG00000003805	SMARCA1	90	75.210	Pteropus_vampyrus
ENSMEUG00000008819	SMARCA1	61	87.187	ENSPNYG00000012299	smarca5	89	87.187	Pundamilia_nyererei
ENSMEUG00000008819	SMARCA1	99	81.329	ENSRNOG00000003762	Smarca1	89	81.329	Rattus_norvegicus
ENSMEUG00000008819	SMARCA1	99	81.914	ENSRROG00000034167	SMARCA1	89	81.933	Rhinopithecus_roxellana
ENSMEUG00000008819	SMARCA1	100	81.933	ENSSBOG00000020641	SMARCA1	94	82.511	Saimiri_boliviensis_boliviensis
ENSMEUG00000008819	SMARCA1	97	79.784	ENSSHAG00000013518	SMARCA1	93	79.784	Sarcophilus_harrisii
ENSMEUG00000008819	SMARCA1	99	81.112	ENSSFOG00015009043	smarca1	92	81.112	Scleropages_formosus
ENSMEUG00000008819	SMARCA1	99	75.499	ENSSFOG00015016794	smarca5	94	76.623	Scleropages_formosus
ENSMEUG00000008819	SMARCA1	97	75.888	ENSSMAG00000004801	smarca5	89	75.888	Scophthalmus_maximus
ENSMEUG00000008819	SMARCA1	97	75.888	ENSSDUG00000020690	smarca5	89	75.888	Seriola_dumerili
ENSMEUG00000008819	SMARCA1	97	75.888	ENSSLDG00000025190	smarca5	89	75.888	Seriola_lalandi_dorsalis
ENSMEUG00000008819	SMARCA1	83	96.364	ENSSARG00000000842	SMARCA1	79	96.364	Sorex_araneus
ENSMEUG00000008819	SMARCA1	100	85.819	ENSSPUG00000000590	SMARCA1	91	85.819	Sphenodon_punctatus
ENSMEUG00000008819	SMARCA1	98	76.043	ENSSPAG00000002894	smarca5	91	75.685	Stegastes_partitus
ENSMEUG00000008819	SMARCA1	99	81.914	ENSSSCG00000012649	SMARCA1	90	81.933	Sus_scrofa
ENSMEUG00000008819	SMARCA1	98	85.439	ENSTGUG00000003899	-	94	85.439	Taeniopygia_guttata
ENSMEUG00000008819	SMARCA1	98	76.257	ENSTRUG00000014094	smarca5	89	76.257	Takifugu_rubripes
ENSMEUG00000008819	SMARCA1	97	75.350	ENSTNIG00000017717	smarca5	88	75.080	Tetraodon_nigroviridis
ENSMEUG00000008819	SMARCA1	100	75.945	ENSTBEG00000014973	SMARCA1	96	75.945	Tupaia_belangeri
ENSMEUG00000008819	SMARCA1	99	78.541	ENSTTRG00000006168	SMARCA1	96	78.541	Tursiops_truncatus
ENSMEUG00000008819	SMARCA1	99	81.598	ENSUAMG00000020201	SMARCA1	89	81.618	Ursus_americanus
ENSMEUG00000008819	SMARCA1	88	90.789	ENSUMAG00000004073	SMARCA1	98	90.909	Ursus_maritimus
ENSMEUG00000008819	SMARCA1	83	81.660	ENSVPAG00000010492	-	82	81.660	Vicugna_pacos
ENSMEUG00000008819	SMARCA1	100	82.143	ENSVVUG00000008878	SMARCA1	96	82.725	Vulpes_vulpes
ENSMEUG00000008819	SMARCA1	99	83.474	ENSXETG00000001526	smarca1	94	83.474	Xenopus_tropicalis
ENSMEUG00000008819	SMARCA1	98	76.257	ENSXCOG00000011170	smarca5	91	76.257	Xiphophorus_couchianus
ENSMEUG00000008819	SMARCA1	98	76.257	ENSXMAG00000009678	smarca5	94	76.153	Xiphophorus_maculatus