EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMEUG00000009442 (Gene tree)
Gene ID: -
Gene Symbol: RAB20
Alias: FLJ20429
Full Name: RAB20%2C member RAS oncogene family
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 5190 bases
Position: chrGeneScaffold_5027:783-5972
Accession: 18260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000008610	MMR_HSR1	PF01926.23	4.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000009463	RAB20-201	705	-	ENSMEUP00000008610	234 (aa)	-	UPI0001B1F2AD

Gene Model

Click here to download ENSMEUG00000009442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000009442's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMEUG00000009442	RAB20	50	30.894	ENSMEUG00000010489	RAB2B	57	30.894
ENSMEUG00000009442	RAB20	51	31.496	ENSMEUG00000015626	-	76	31.496
ENSMEUG00000009442	RAB20	71	30.286	ENSMEUG00000003686	-	78	30.286
ENSMEUG00000009442	RAB20	50	35.537	ENSMEUG00000000603	-	93	35.537
ENSMEUG00000009442	RAB20	61	32.886	ENSMEUG00000005002	RAB17	85	32.886

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000009442	RAB20	99	58.755	ENSATEG00000011117	rab20	100	58.755	Anabas_testudineus
ENSMEUG00000009442	RAB20	99	74.249	ENSAPLG00000011744	RAB20	99	74.249	Anas_platyrhynchos
ENSMEUG00000009442	RAB20	99	70.130	ENSACAG00000014045	RAB20	99	70.130	Anolis_carolinensis
ENSMEUG00000009442	RAB20	99	57.085	ENSAMXG00000003504	rab20	99	57.085	Astyanax_mexicanus
ENSMEUG00000009442	RAB20	99	75.758	ENSCPBG00000005866	RAB20	99	75.758	Chrysemys_picta_bellii
ENSMEUG00000009442	RAB20	99	64.103	ENSCSEG00000011160	rab20	99	64.103	Cynoglossus_semilaevis
ENSMEUG00000009442	RAB20	99	63.136	ENSDARG00000005049	rab20	97	63.136	Danio_rerio
ENSMEUG00000009442	RAB20	99	60.547	ENSELUG00000004092	rab20	98	60.547	Esox_lucius
ENSMEUG00000009442	RAB20	100	75.641	ENSFALG00000004409	RAB20	100	75.641	Ficedula_albicollis
ENSMEUG00000009442	RAB20	99	63.445	ENSGACG00000003527	rab20	100	63.445	Gasterosteus_aculeatus
ENSMEUG00000009442	RAB20	99	58.498	ENSHCOG00000013468	rab20	98	58.498	Hippocampus_comes
ENSMEUG00000009442	RAB20	100	61.983	ENSIPUG00000018288	RAB20	97	63.025	Ictalurus_punctatus
ENSMEUG00000009442	RAB20	100	61.983	ENSIPUG00000000432	RAB20	97	63.025	Ictalurus_punctatus
ENSMEUG00000009442	RAB20	99	65.665	ENSLACG00000011001	RAB20	99	65.665	Latimeria_chalumnae
ENSMEUG00000009442	RAB20	99	59.766	ENSMAMG00000015214	rab20	98	59.766	Mastacembelus_armatus
ENSMEUG00000009442	RAB20	99	62.605	ENSMMOG00000020022	rab20	100	62.605	Mola_mola
ENSMEUG00000009442	RAB20	86	47.143	ENSPMAG00000004439	rab20	98	46.948	Petromyzon_marinus
ENSMEUG00000009442	RAB20	99	61.475	ENSPNAG00000008867	rab20	99	62.917	Pygocentrus_nattereri
ENSMEUG00000009442	RAB20	99	59.216	ENSSMAG00000018818	rab20	100	59.216	Scophthalmus_maximus
ENSMEUG00000009442	RAB20	99	59.533	ENSSDUG00000005148	rab20	98	59.533	Seriola_dumerili
ENSMEUG00000009442	RAB20	99	76.395	ENSTGUG00000008797	RAB20	99	76.395	Taeniopygia_guttata
ENSMEUG00000009442	RAB20	99	58.755	ENSTRUG00000022951	rab20	98	58.755	Takifugu_rubripes
ENSMEUG00000009442	RAB20	94	64.286	ENSTNIG00000013920	rab20	100	61.667	Tetraodon_nigroviridis