EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000011023 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 21082 bases
Position: chrGeneScaffold_1376:8863-29944
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000010055	zf-C3HC	PF07967.13	4.4e-36	1	1
ENSMEUP00000010055	Rsm1	PF08600.10	1.1e-16	1	2
ENSMEUP00000010055	Rsm1	PF08600.10	1.1e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000011055	ZC3HC1-201	1509	-	ENSMEUP00000010055	502 (aa)	-	UPI0001B201E8

Gene Model

Click here to download ENSMEUG00000011023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000011023's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000011023	ZC3HC1	98	79.919	ENSG00000091732	ZC3HC1	98	79.919	Homo_sapiens
ENSMEUG00000011023	ZC3HC1	95	43.888	ENSAPOG00000009078	zc3hc1	95	43.912	Acanthochromis_polyacanthus
ENSMEUG00000011023	ZC3HC1	100	77.976	ENSAMEG00000005425	ZC3HC1	100	77.976	Ailuropoda_melanoleuca
ENSMEUG00000011023	ZC3HC1	95	43.200	ENSACIG00000019513	zc3hc1	95	43.227	Amphilophus_citrinellus
ENSMEUG00000011023	ZC3HC1	95	43.662	ENSAOCG00000024310	zc3hc1	95	43.687	Amphiprion_ocellaris
ENSMEUG00000011023	ZC3HC1	95	43.662	ENSAPEG00000004907	zc3hc1	95	43.687	Amphiprion_percula
ENSMEUG00000011023	ZC3HC1	81	47.418	ENSATEG00000016898	zc3hc1	84	47.430	Anabas_testudineus
ENSMEUG00000011023	ZC3HC1	88	60.225	ENSAPLG00000003832	ZC3HC1	99	60.225	Anas_platyrhynchos
ENSMEUG00000011023	ZC3HC1	98	62.302	ENSACAG00000001638	ZC3HC1	98	62.302	Anolis_carolinensis
ENSMEUG00000011023	ZC3HC1	98	78.182	ENSANAG00000022213	ZC3HC1	98	79.083	Aotus_nancymaae
ENSMEUG00000011023	ZC3HC1	86	45.556	ENSACLG00000025033	zc3hc1	94	45.575	Astatotilapia_calliptera
ENSMEUG00000011023	ZC3HC1	94	43.305	ENSAMXG00000036792	zc3hc1	97	43.515	Astyanax_mexicanus
ENSMEUG00000011023	ZC3HC1	100	75.697	ENSBTAG00000011247	ZC3HC1	100	75.697	Bos_taurus
ENSMEUG00000011023	ZC3HC1	98	79.150	ENSCJAG00000010536	ZC3HC1	98	79.150	Callithrix_jacchus
ENSMEUG00000011023	ZC3HC1	98	79.352	ENSCAFG00000028735	-	98	79.352	Canis_familiaris
ENSMEUG00000011023	ZC3HC1	100	78.287	ENSCAFG00000031850	-	98	79.352	Canis_familiaris
ENSMEUG00000011023	ZC3HC1	98	79.352	ENSCAFG00000029401	-	99	78.287	Canis_familiaris
ENSMEUG00000011023	ZC3HC1	100	77.822	ENSCAFG00000001499	-	99	77.822	Canis_familiaris
ENSMEUG00000011023	ZC3HC1	98	79.150	ENSCAFG00020006829	-	98	79.150	Canis_lupus_dingo
ENSMEUG00000011023	ZC3HC1	100	76.786	ENSCAFG00020023333	-	100	77.778	Canis_lupus_dingo
ENSMEUG00000011023	ZC3HC1	100	70.319	ENSCHIG00000014103	ZC3HC1	100	70.319	Capra_hircus
ENSMEUG00000011023	ZC3HC1	98	77.935	ENSTSYG00000002843	ZC3HC1	98	77.935	Carlito_syrichta
ENSMEUG00000011023	ZC3HC1	90	57.237	ENSCAPG00000016300	ZC3HC1	100	56.579	Cavia_aperea
ENSMEUG00000011023	ZC3HC1	98	74.338	ENSCPOG00000014034	ZC3HC1	97	77.341	Cavia_porcellus
ENSMEUG00000011023	ZC3HC1	98	63.158	ENSCCAG00000020384	ZC3HC1	100	76.211	Cebus_capucinus
ENSMEUG00000011023	ZC3HC1	98	79.757	ENSCATG00000023130	ZC3HC1	98	79.757	Cercocebus_atys
ENSMEUG00000011023	ZC3HC1	100	54.582	ENSCLAG00000008260	ZC3HC1	100	54.382	Chinchilla_lanigera
ENSMEUG00000011023	ZC3HC1	73	77.869	ENSCSAG00000009881	ZC3HC1	97	77.869	Chlorocebus_sabaeus
ENSMEUG00000011023	ZC3HC1	90	81.596	ENSCHOG00000011846	ZC3HC1	99	81.596	Choloepus_hoffmanni
ENSMEUG00000011023	ZC3HC1	96	69.753	ENSCPBG00000017519	ZC3HC1	99	68.938	Chrysemys_picta_bellii
ENSMEUG00000011023	ZC3HC1	52	31.579	ENSCING00000004440	-	61	31.579	Ciona_intestinalis
ENSMEUG00000011023	ZC3HC1	98	79.352	ENSCANG00000029091	ZC3HC1	98	79.352	Colobus_angolensis_palliatus
ENSMEUG00000011023	ZC3HC1	100	75.299	ENSCGRG00001018805	Zc3hc1	100	75.588	Cricetulus_griseus_chok1gshd
ENSMEUG00000011023	ZC3HC1	100	74.303	ENSCGRG00000017114	Zc3hc1	100	74.303	Cricetulus_griseus_crigri
ENSMEUG00000011023	ZC3HC1	99	40.661	ENSCSEG00000009284	zc3hc1	98	40.856	Cynoglossus_semilaevis
ENSMEUG00000011023	ZC3HC1	96	42.147	ENSCVAG00000011566	zc3hc1	97	42.147	Cyprinodon_variegatus
ENSMEUG00000011023	ZC3HC1	97	47.581	ENSDARG00000062651	zc3hc1	96	47.581	Danio_rerio
ENSMEUG00000011023	ZC3HC1	98	79.555	ENSDNOG00000045016	ZC3HC1	98	79.555	Dasypus_novemcinctus
ENSMEUG00000011023	ZC3HC1	98	69.980	ENSDORG00000008697	Zc3hc1	98	69.980	Dipodomys_ordii
ENSMEUG00000011023	ZC3HC1	90	79.867	ENSEASG00005008789	ZC3HC1	97	79.867	Equus_asinus_asinus
ENSMEUG00000011023	ZC3HC1	98	79.192	ENSECAG00000017886	ZC3HC1	98	79.192	Equus_caballus
ENSMEUG00000011023	ZC3HC1	82	72.671	ENSEEUG00000003123	ZC3HC1	82	72.671	Erinaceus_europaeus
ENSMEUG00000011023	ZC3HC1	95	43.028	ENSELUG00000023168	zc3hc1	95	44.356	Esox_lucius
ENSMEUG00000011023	ZC3HC1	100	78.884	ENSFCAG00000010429	ZC3HC1	100	78.884	Felis_catus
ENSMEUG00000011023	ZC3HC1	90	61.325	ENSFALG00000005006	ZC3HC1	100	61.325	Ficedula_albicollis
ENSMEUG00000011023	ZC3HC1	100	75.697	ENSFDAG00000019897	ZC3HC1	100	75.697	Fukomys_damarensis
ENSMEUG00000011023	ZC3HC1	96	42.137	ENSFHEG00000020149	zc3hc1	98	42.095	Fundulus_heteroclitus
ENSMEUG00000011023	ZC3HC1	94	40.891	ENSGMOG00000002914	zc3hc1	95	40.486	Gadus_morhua
ENSMEUG00000011023	ZC3HC1	98	62.677	ENSGALG00000008003	ZC3HC1	99	62.677	Gallus_gallus
ENSMEUG00000011023	ZC3HC1	96	42.799	ENSGAFG00000016095	zc3hc1	96	42.828	Gambusia_affinis
ENSMEUG00000011023	ZC3HC1	95	44.869	ENSGACG00000019706	zc3hc1	95	44.890	Gasterosteus_aculeatus
ENSMEUG00000011023	ZC3HC1	77	70.844	ENSGAGG00000016106	ZC3HC1	100	70.844	Gopherus_agassizii
ENSMEUG00000011023	ZC3HC1	98	79.716	ENSGGOG00000015504	ZC3HC1	98	79.716	Gorilla_gorilla
ENSMEUG00000011023	ZC3HC1	95	43.952	ENSHBUG00000008347	zc3hc1	95	43.976	Haplochromis_burtoni
ENSMEUG00000011023	ZC3HC1	98	77.328	ENSHGLG00000005085	ZC3HC1	98	77.328	Heterocephalus_glaber_female
ENSMEUG00000011023	ZC3HC1	98	77.126	ENSHGLG00100011395	ZC3HC1	98	77.126	Heterocephalus_glaber_male
ENSMEUG00000011023	ZC3HC1	95	42.653	ENSHCOG00000014309	zc3hc1	97	42.771	Hippocampus_comes
ENSMEUG00000011023	ZC3HC1	100	76.096	ENSSTOG00000023599	-	100	76.096	Ictidomys_tridecemlineatus
ENSMEUG00000011023	ZC3HC1	99	43.080	ENSKMAG00000015315	zc3hc1	93	42.885	Kryptolebias_marmoratus
ENSMEUG00000011023	ZC3HC1	95	44.355	ENSLBEG00000017325	zc3hc1	95	44.355	Labrus_bergylta
ENSMEUG00000011023	ZC3HC1	79	55.366	ENSLACG00000013032	ZC3HC1	97	55.366	Latimeria_chalumnae
ENSMEUG00000011023	ZC3HC1	97	51.697	ENSLOCG00000015963	zc3hc1	99	52.191	Lepisosteus_oculatus
ENSMEUG00000011023	ZC3HC1	98	78.672	ENSLAFG00000001292	ZC3HC1	98	78.831	Loxodonta_africana
ENSMEUG00000011023	ZC3HC1	98	79.757	ENSMFAG00000030176	ZC3HC1	98	79.757	Macaca_fascicularis
ENSMEUG00000011023	ZC3HC1	98	78.586	ENSMMUG00000006155	ZC3HC1	98	79.656	Macaca_mulatta
ENSMEUG00000011023	ZC3HC1	98	79.960	ENSMNEG00000011833	ZC3HC1	98	79.960	Macaca_nemestrina
ENSMEUG00000011023	ZC3HC1	98	79.757	ENSMLEG00000027328	ZC3HC1	98	79.757	Mandrillus_leucophaeus
ENSMEUG00000011023	ZC3HC1	96	43.504	ENSMAMG00000010691	zc3hc1	97	43.529	Mastacembelus_armatus
ENSMEUG00000011023	ZC3HC1	95	44.153	ENSMZEG00005007142	zc3hc1	95	44.177	Maylandia_zebra
ENSMEUG00000011023	ZC3HC1	98	60.922	ENSMGAG00000002977	ZC3HC1	99	62.325	Meleagris_gallopavo
ENSMEUG00000011023	ZC3HC1	82	70.602	ENSMAUG00000017032	Zc3hc1	92	70.602	Mesocricetus_auratus
ENSMEUG00000011023	ZC3HC1	98	79.555	ENSMICG00000009167	ZC3HC1	98	79.555	Microcebus_murinus
ENSMEUG00000011023	ZC3HC1	98	75.862	ENSMOCG00000015239	Zc3hc1	98	77.039	Microtus_ochrogaster
ENSMEUG00000011023	ZC3HC1	87	43.478	ENSMMOG00000002204	zc3hc1	99	43.261	Mola_mola
ENSMEUG00000011023	ZC3HC1	100	74.615	ENSMODG00000014630	ZC3HC1	100	74.615	Monodelphis_domestica
ENSMEUG00000011023	ZC3HC1	94	43.408	ENSMALG00000014447	zc3hc1	95	43.487	Monopterus_albus
ENSMEUG00000011023	ZC3HC1	100	73.904	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	74.118	Mus_caroli
ENSMEUG00000011023	ZC3HC1	100	74.701	ENSMUSG00000039130	Zc3hc1	100	74.701	Mus_musculus
ENSMEUG00000011023	ZC3HC1	100	68.725	MGP_PahariEiJ_G0021941	Zc3hc1	100	68.725	Mus_pahari
ENSMEUG00000011023	ZC3HC1	100	74.701	MGP_SPRETEiJ_G0029183	Zc3hc1	100	74.701	Mus_spretus
ENSMEUG00000011023	ZC3HC1	94	78.769	ENSMPUG00000005297	ZC3HC1	93	78.769	Mustela_putorius_furo
ENSMEUG00000011023	ZC3HC1	100	77.030	ENSMLUG00000000063	-	100	77.030	Myotis_lucifugus
ENSMEUG00000011023	ZC3HC1	67	71.554	ENSMLUG00000029228	-	99	71.554	Myotis_lucifugus
ENSMEUG00000011023	ZC3HC1	100	77.734	ENSNGAG00000019014	Zc3hc1	100	77.734	Nannospalax_galili
ENSMEUG00000011023	ZC3HC1	95	43.320	ENSNBRG00000004577	zc3hc1	95	43.347	Neolamprologus_brichardi
ENSMEUG00000011023	ZC3HC1	99	77.645	ENSNLEG00000012698	ZC3HC1	99	77.645	Nomascus_leucogenys
ENSMEUG00000011023	ZC3HC1	65	72.868	ENSOPRG00000007867	-	67	72.868	Ochotona_princeps
ENSMEUG00000011023	ZC3HC1	100	72.709	ENSODEG00000014604	ZC3HC1	100	73.315	Octodon_degus
ENSMEUG00000011023	ZC3HC1	95	43.750	ENSONIG00000011644	zc3hc1	95	43.775	Oreochromis_niloticus
ENSMEUG00000011023	ZC3HC1	90	70.905	ENSOANG00000011460	ZC3HC1	100	70.905	Ornithorhynchus_anatinus
ENSMEUG00000011023	ZC3HC1	100	74.653	ENSOCUG00000017137	ZC3HC1	100	74.653	Oryctolagus_cuniculus
ENSMEUG00000011023	ZC3HC1	95	43.265	ENSORLG00000014409	zc3hc1	94	43.496	Oryzias_latipes
ENSMEUG00000011023	ZC3HC1	95	43.265	ENSORLG00020015874	zc3hc1	94	43.496	Oryzias_latipes_hni
ENSMEUG00000011023	ZC3HC1	96	42.886	ENSORLG00015014641	zc3hc1	96	43.114	Oryzias_latipes_hsok
ENSMEUG00000011023	ZC3HC1	95	43.633	ENSOMEG00000020604	zc3hc1	95	43.827	Oryzias_melastigma
ENSMEUG00000011023	ZC3HC1	96	43.238	ENSOMEG00000000215	zc3hc1	97	43.434	Oryzias_melastigma
ENSMEUG00000011023	ZC3HC1	98	73.887	ENSOGAG00000026193	ZC3HC1	98	73.887	Otolemur_garnettii
ENSMEUG00000011023	ZC3HC1	100	76.436	ENSOARG00000004907	ZC3HC1	99	76.436	Ovis_aries
ENSMEUG00000011023	ZC3HC1	98	79.919	ENSPPAG00000043172	ZC3HC1	98	79.919	Pan_paniscus
ENSMEUG00000011023	ZC3HC1	100	78.088	ENSPPRG00000001004	ZC3HC1	100	78.088	Panthera_pardus
ENSMEUG00000011023	ZC3HC1	100	78.685	ENSPTIG00000007823	ZC3HC1	100	78.685	Panthera_tigris_altaica
ENSMEUG00000011023	ZC3HC1	98	79.716	ENSPTRG00000019685	ZC3HC1	98	79.716	Pan_troglodytes
ENSMEUG00000011023	ZC3HC1	98	78.384	ENSPANG00000014229	ZC3HC1	98	79.370	Papio_anubis
ENSMEUG00000011023	ZC3HC1	95	47.609	ENSPKIG00000007172	zc3hc1	95	47.609	Paramormyrops_kingsleyae
ENSMEUG00000011023	ZC3HC1	95	61.728	ENSPSIG00000016646	ZC3HC1	98	61.089	Pelodiscus_sinensis
ENSMEUG00000011023	ZC3HC1	91	42.486	ENSPMGG00000003548	zc3hc1	94	37.161	Periophthalmus_magnuspinnatus
ENSMEUG00000011023	ZC3HC1	98	76.065	ENSPEMG00000000514	Zc3hc1	98	76.220	Peromyscus_maniculatus_bairdii
ENSMEUG00000011023	ZC3HC1	97	92.623	ENSPCIG00000020619	ZC3HC1	100	96.401	Phascolarctos_cinereus
ENSMEUG00000011023	ZC3HC1	97	42.744	ENSPFOG00000003466	zc3hc1	98	42.772	Poecilia_formosa
ENSMEUG00000011023	ZC3HC1	97	42.490	ENSPLAG00000022211	zc3hc1	98	42.520	Poecilia_latipinna
ENSMEUG00000011023	ZC3HC1	97	42.744	ENSPMEG00000001458	zc3hc1	98	42.772	Poecilia_mexicana
ENSMEUG00000011023	ZC3HC1	97	42.292	ENSPREG00000004004	zc3hc1	98	42.178	Poecilia_reticulata
ENSMEUG00000011023	ZC3HC1	98	73.737	ENSPPYG00000017998	ZC3HC1	98	73.737	Pongo_abelii
ENSMEUG00000011023	ZC3HC1	92	76.522	ENSPCAG00000001182	ZC3HC1	100	76.522	Procavia_capensis
ENSMEUG00000011023	ZC3HC1	98	79.757	ENSPCOG00000017354	ZC3HC1	100	78.685	Propithecus_coquereli
ENSMEUG00000011023	ZC3HC1	100	74.104	ENSPVAG00000003195	ZC3HC1	100	75.299	Pteropus_vampyrus
ENSMEUG00000011023	ZC3HC1	95	44.153	ENSPNYG00000020692	zc3hc1	95	44.177	Pundamilia_nyererei
ENSMEUG00000011023	ZC3HC1	95	44.625	ENSPNAG00000020746	zc3hc1	97	44.603	Pygocentrus_nattereri
ENSMEUG00000011023	ZC3HC1	98	74.899	ENSRNOG00000010154	Zc3hc1	98	74.899	Rattus_norvegicus
ENSMEUG00000011023	ZC3HC1	90	79.912	ENSRBIG00000029409	ZC3HC1	100	79.912	Rhinopithecus_bieti
ENSMEUG00000011023	ZC3HC1	98	79.352	ENSRROG00000041831	ZC3HC1	98	79.352	Rhinopithecus_roxellana
ENSMEUG00000011023	ZC3HC1	86	81.250	ENSSBOG00000032787	ZC3HC1	98	81.250	Saimiri_boliviensis_boliviensis
ENSMEUG00000011023	ZC3HC1	92	91.613	ENSSHAG00000002529	ZC3HC1	100	91.613	Sarcophilus_harrisii
ENSMEUG00000011023	ZC3HC1	95	48.770	ENSSFOG00015003667	zc3hc1	91	48.566	Scleropages_formosus
ENSMEUG00000011023	ZC3HC1	95	43.400	ENSSMAG00000000647	zc3hc1	86	44.200	Scophthalmus_maximus
ENSMEUG00000011023	ZC3HC1	95	44.807	ENSSDUG00000004241	zc3hc1	93	44.828	Seriola_dumerili
ENSMEUG00000011023	ZC3HC1	95	45.010	ENSSLDG00000025056	zc3hc1	93	45.030	Seriola_lalandi_dorsalis
ENSMEUG00000011023	ZC3HC1	98	70.445	ENSSARG00000012013	ZC3HC1	98	70.445	Sorex_araneus
ENSMEUG00000011023	ZC3HC1	86	58.621	ENSSPUG00000000778	ZC3HC1	86	58.621	Sphenodon_punctatus
ENSMEUG00000011023	ZC3HC1	95	44.242	ENSSPAG00000020041	zc3hc1	95	44.266	Stegastes_partitus
ENSMEUG00000011023	ZC3HC1	100	77.689	ENSSSCG00000016565	ZC3HC1	100	78.920	Sus_scrofa
ENSMEUG00000011023	ZC3HC1	95	44.215	ENSTRUG00000020077	zc3hc1	95	44.215	Takifugu_rubripes
ENSMEUG00000011023	ZC3HC1	95	43.354	ENSTNIG00000007585	zc3hc1	99	43.326	Tetraodon_nigroviridis
ENSMEUG00000011023	ZC3HC1	98	68.560	ENSTBEG00000005216	ZC3HC1	98	68.560	Tupaia_belangeri
ENSMEUG00000011023	ZC3HC1	95	78.125	ENSTTRG00000008458	ZC3HC1	100	78.125	Tursiops_truncatus
ENSMEUG00000011023	ZC3HC1	98	79.352	ENSUAMG00000020249	ZC3HC1	98	79.352	Ursus_americanus
ENSMEUG00000011023	ZC3HC1	98	79.150	ENSUMAG00000009268	ZC3HC1	98	79.150	Ursus_maritimus
ENSMEUG00000011023	ZC3HC1	77	79.592	ENSVPAG00000010846	ZC3HC1	77	79.592	Vicugna_pacos
ENSMEUG00000011023	ZC3HC1	94	78.556	ENSVVUG00000012386	ZC3HC1	98	78.556	Vulpes_vulpes
ENSMEUG00000011023	ZC3HC1	92	52.991	ENSXETG00000033900	zc3hc1	96	52.991	Xenopus_tropicalis
ENSMEUG00000011023	ZC3HC1	97	41.304	ENSXCOG00000013570	zc3hc1	98	41.339	Xiphophorus_couchianus
ENSMEUG00000011023	ZC3HC1	87	43.709	ENSXMAG00000010979	zc3hc1	95	43.736	Xiphophorus_maculatus