EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMEUG00000011378 (Gene tree)
Gene ID: -
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 16194 bases
Position: chrGeneScaffold_9835:9740-25933
Accession: 12651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000010391	Anticodon_1	PF08264.13	2.5e-35	1	1
ENSMEUP00000010391	tRNA-synt_1	PF00133.22	1.5e-200	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000011421	VARS-201	3789	-	ENSMEUP00000010391	1262 (aa)	-	UPI0001B2066E

Gene Model

Click here to download ENSMEUG00000011378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000011378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMEUG00000011378	VARS	66	52.429	ENSMEUG00000014475	VARS2	88	52.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000011378	VARS	100	82.753	ENSG00000204394	VARS	100	86.207	Homo_sapiens
ENSMEUG00000011378	VARS	98	63.171	ENSAPOG00000020921	vars	94	73.270	Acanthochromis_polyacanthus
ENSMEUG00000011378	VARS	98	63.171	ENSAPOG00000020691	vars	94	73.270	Acanthochromis_polyacanthus
ENSMEUG00000011378	VARS	100	82.767	ENSAMEG00000006417	VARS	100	82.767	Ailuropoda_melanoleuca
ENSMEUG00000011378	VARS	100	63.502	ENSACIG00000013752	vars	100	63.836	Amphilophus_citrinellus
ENSMEUG00000011378	VARS	100	63.551	ENSAOCG00000002447	vars	95	72.829	Amphiprion_ocellaris
ENSMEUG00000011378	VARS	100	63.474	ENSAPEG00000010638	vars	99	63.367	Amphiprion_percula
ENSMEUG00000011378	VARS	100	62.904	ENSATEG00000020219	vars	100	62.451	Anabas_testudineus
ENSMEUG00000011378	VARS	85	78.422	ENSACAG00000029133	-	93	78.331	Anolis_carolinensis
ENSMEUG00000011378	VARS	100	83.386	ENSANAG00000015453	VARS	100	83.386	Aotus_nancymaae
ENSMEUG00000011378	VARS	100	63.219	ENSACLG00000025699	vars	91	71.944	Astatotilapia_calliptera
ENSMEUG00000011378	VARS	88	74.972	ENSAMXG00000017716	vars	91	74.972	Astyanax_mexicanus
ENSMEUG00000011378	VARS	100	83.149	ENSBTAG00000005631	VARS	100	83.149	Bos_taurus
ENSMEUG00000011378	VARS	100	82.911	ENSCJAG00000002604	VARS	100	82.911	Callithrix_jacchus
ENSMEUG00000011378	VARS	100	82.437	ENSCAFG00000000636	VARS	100	82.437	Canis_familiaris
ENSMEUG00000011378	VARS	94	82.770	ENSCAFG00020020790	VARS	96	82.770	Canis_lupus_dingo
ENSMEUG00000011378	VARS	100	83.307	ENSCHIG00000011008	VARS	100	83.307	Capra_hircus
ENSMEUG00000011378	VARS	100	82.516	ENSTSYG00000001567	VARS	100	82.516	Carlito_syrichta
ENSMEUG00000011378	VARS	95	77.787	ENSCAPG00000013736	VARS	99	81.574	Cavia_aperea
ENSMEUG00000011378	VARS	100	82.437	ENSCPOG00000000870	VARS	100	82.437	Cavia_porcellus
ENSMEUG00000011378	VARS	100	83.228	ENSCCAG00000035656	VARS	100	83.228	Cebus_capucinus
ENSMEUG00000011378	VARS	100	83.228	ENSCATG00000022394	VARS	100	83.228	Cercocebus_atys
ENSMEUG00000011378	VARS	90	78.413	ENSCLAG00000009470	VARS	95	78.413	Chinchilla_lanigera
ENSMEUG00000011378	VARS	100	83.228	ENSCSAG00000008784	VARS	100	83.228	Chlorocebus_sabaeus
ENSMEUG00000011378	VARS	77	74.333	ENSCPBG00000007943	VARS	96	74.333	Chrysemys_picta_bellii
ENSMEUG00000011378	VARS	100	83.228	ENSCANG00000033570	VARS	100	83.228	Colobus_angolensis_palliatus
ENSMEUG00000011378	VARS	100	82.199	ENSCGRG00001005686	Vars	100	82.199	Cricetulus_griseus_chok1gshd
ENSMEUG00000011378	VARS	92	77.219	ENSCGRG00000013352	Vars	78	77.219	Cricetulus_griseus_crigri
ENSMEUG00000011378	VARS	100	62.754	ENSCSEG00000019652	vars	100	62.687	Cynoglossus_semilaevis
ENSMEUG00000011378	VARS	100	64.230	ENSCVAG00000022398	vars	94	73.046	Cyprinodon_variegatus
ENSMEUG00000011378	VARS	95	72.306	ENSDARG00000044575	vars	94	72.289	Danio_rerio
ENSMEUG00000011378	VARS	78	86.350	ENSDORG00000016433	Vars	89	86.190	Dipodomys_ordii
ENSMEUG00000011378	VARS	68	82.459	ENSETEG00000003824	VARS	77	82.459	Echinops_telfairi
ENSMEUG00000011378	VARS	50	71.196	ENSEBUG00000007086	vars	84	70.332	Eptatretus_burgeri
ENSMEUG00000011378	VARS	57	62.500	ENSEBUG00000004637	vars	100	62.775	Eptatretus_burgeri
ENSMEUG00000011378	VARS	100	83.307	ENSEASG00005015673	VARS	100	83.307	Equus_asinus_asinus
ENSMEUG00000011378	VARS	100	83.241	ENSECAG00000014620	VARS	100	83.241	Equus_caballus
ENSMEUG00000011378	VARS	78	80.201	ENSEEUG00000004116	VARS	80	80.201	Erinaceus_europaeus
ENSMEUG00000011378	VARS	95	71.759	ENSELUG00000006550	vars	91	71.543	Esox_lucius
ENSMEUG00000011378	VARS	100	82.832	ENSFCAG00000004510	VARS	100	82.832	Felis_catus
ENSMEUG00000011378	VARS	82	82.577	ENSFDAG00000011401	VARS	100	82.577	Fukomys_damarensis
ENSMEUG00000011378	VARS	95	73.467	ENSFHEG00000010672	vars	97	71.891	Fundulus_heteroclitus
ENSMEUG00000011378	VARS	87	71.457	ENSGMOG00000014908	vars	90	71.242	Gadus_morhua
ENSMEUG00000011378	VARS	100	64.408	ENSGAFG00000021630	vars	100	64.330	Gambusia_affinis
ENSMEUG00000011378	VARS	92	64.232	ENSGACG00000009601	vars	91	70.884	Gasterosteus_aculeatus
ENSMEUG00000011378	VARS	100	83.228	ENSGGOG00000011364	VARS	100	83.228	Gorilla_gorilla
ENSMEUG00000011378	VARS	100	63.219	ENSHBUG00000017151	vars	91	71.944	Haplochromis_burtoni
ENSMEUG00000011378	VARS	100	81.487	ENSHGLG00000011646	VARS	100	81.092	Heterocephalus_glaber_female
ENSMEUG00000011378	VARS	93	74.564	ENSHGLG00100018062	VARS	94	81.890	Heterocephalus_glaber_male
ENSMEUG00000011378	VARS	94	72.000	ENSHCOG00000012198	vars	96	72.000	Hippocampus_comes
ENSMEUG00000011378	VARS	95	72.133	ENSIPUG00000005218	vars	95	71.792	Ictalurus_punctatus
ENSMEUG00000011378	VARS	100	83.241	ENSSTOG00000013112	VARS	100	83.241	Ictidomys_tridecemlineatus
ENSMEUG00000011378	VARS	100	80.775	ENSJJAG00000019749	-	100	80.380	Jaculus_jaculus
ENSMEUG00000011378	VARS	100	64.082	ENSJJAG00000015343	-	98	66.584	Jaculus_jaculus
ENSMEUG00000011378	VARS	95	71.515	ENSKMAG00000009455	vars	100	63.478	Kryptolebias_marmoratus
ENSMEUG00000011378	VARS	96	70.715	ENSLBEG00000010341	vars	91	71.844	Labrus_bergylta
ENSMEUG00000011378	VARS	89	68.251	ENSLACG00000015232	VARS	93	68.030	Latimeria_chalumnae
ENSMEUG00000011378	VARS	100	64.969	ENSLOCG00000004240	vars	100	65.023	Lepisosteus_oculatus
ENSMEUG00000011378	VARS	100	82.199	ENSLAFG00000023090	VARS	100	81.804	Loxodonta_africana
ENSMEUG00000011378	VARS	100	83.149	ENSMFAG00000001032	VARS	100	83.149	Macaca_fascicularis
ENSMEUG00000011378	VARS	100	83.149	ENSMMUG00000006828	VARS	100	83.149	Macaca_mulatta
ENSMEUG00000011378	VARS	100	83.149	ENSMNEG00000042072	VARS	100	83.149	Macaca_nemestrina
ENSMEUG00000011378	VARS	100	83.228	ENSMLEG00000039307	VARS	100	83.228	Mandrillus_leucophaeus
ENSMEUG00000011378	VARS	100	63.551	ENSMAMG00000003949	vars	96	72.029	Mastacembelus_armatus
ENSMEUG00000011378	VARS	100	63.219	ENSMZEG00005018327	vars	97	71.779	Maylandia_zebra
ENSMEUG00000011378	VARS	100	82.437	ENSMAUG00000006715	Vars	100	82.437	Mesocricetus_auratus
ENSMEUG00000011378	VARS	100	83.149	ENSMICG00000003548	VARS	100	83.149	Microcebus_murinus
ENSMEUG00000011378	VARS	100	79.826	ENSMOCG00000015404	Vars	100	79.430	Microtus_ochrogaster
ENSMEUG00000011378	VARS	100	63.150	ENSMMOG00000015801	vars	96	72.431	Mola_mola
ENSMEUG00000011378	VARS	100	90.981	ENSMODG00000015204	-	100	90.981	Monodelphis_domestica
ENSMEUG00000011378	VARS	99	63.270	ENSMALG00000022532	vars	94	72.116	Monopterus_albus
ENSMEUG00000011378	VARS	100	83.149	MGP_CAROLIEiJ_G0021491	Vars	100	82.753	Mus_caroli
ENSMEUG00000011378	VARS	100	83.070	ENSMUSG00000007029	Vars	100	82.674	Mus_musculus
ENSMEUG00000011378	VARS	100	82.832	MGP_PahariEiJ_G0020486	Vars	100	82.437	Mus_pahari
ENSMEUG00000011378	VARS	100	83.149	MGP_SPRETEiJ_G0022396	Vars	100	82.753	Mus_spretus
ENSMEUG00000011378	VARS	100	83.149	ENSMPUG00000010821	VARS	100	83.149	Mustela_putorius_furo
ENSMEUG00000011378	VARS	78	82.287	ENSMLUG00000013126	VARS	100	82.996	Myotis_lucifugus
ENSMEUG00000011378	VARS	100	82.120	ENSNGAG00000012151	Vars	100	82.199	Nannospalax_galili
ENSMEUG00000011378	VARS	100	62.986	ENSNBRG00000020520	vars	96	71.792	Neolamprologus_brichardi
ENSMEUG00000011378	VARS	100	82.753	ENSNLEG00000006351	VARS	100	82.753	Nomascus_leucogenys
ENSMEUG00000011378	VARS	100	82.753	ENSOPRG00000003607	VARS	100	82.753	Ochotona_princeps
ENSMEUG00000011378	VARS	100	82.120	ENSODEG00000017681	VARS	100	82.120	Octodon_degus
ENSMEUG00000011378	VARS	100	63.199	ENSONIG00000013064	vars	93	71.944	Oreochromis_niloticus
ENSMEUG00000011378	VARS	77	74.792	ENSOANG00000005400	VARS	98	74.673	Ornithorhynchus_anatinus
ENSMEUG00000011378	VARS	100	83.149	ENSOCUG00000022463	VARS	96	86.694	Oryctolagus_cuniculus
ENSMEUG00000011378	VARS	100	63.482	ENSORLG00000013063	vars	94	73.146	Oryzias_latipes
ENSMEUG00000011378	VARS	100	63.580	ENSORLG00020003504	vars	94	73.246	Oryzias_latipes_hni
ENSMEUG00000011378	VARS	100	63.749	ENSORLG00015009001	vars	94	73.146	Oryzias_latipes_hsok
ENSMEUG00000011378	VARS	100	63.552	ENSOMEG00000015016	vars	94	73.246	Oryzias_melastigma
ENSMEUG00000011378	VARS	100	82.516	ENSOGAG00000007515	VARS	100	82.516	Otolemur_garnettii
ENSMEUG00000011378	VARS	100	83.149	ENSPPAG00000034012	VARS	100	83.149	Pan_paniscus
ENSMEUG00000011378	VARS	100	82.991	ENSPPRG00000014855	VARS	100	82.991	Panthera_pardus
ENSMEUG00000011378	VARS	85	82.993	ENSPTIG00000010462	VARS	94	82.916	Panthera_tigris_altaica
ENSMEUG00000011378	VARS	100	83.070	ENSPTRG00000017985	VARS	100	83.070	Pan_troglodytes
ENSMEUG00000011378	VARS	100	81.625	ENSPANG00000014565	VARS	100	81.625	Papio_anubis
ENSMEUG00000011378	VARS	95	71.859	ENSPKIG00000016304	vars	94	71.764	Paramormyrops_kingsleyae
ENSMEUG00000011378	VARS	100	62.986	ENSPMGG00000023909	vars	100	63.187	Periophthalmus_magnuspinnatus
ENSMEUG00000011378	VARS	100	82.991	ENSPEMG00000006639	Vars	100	82.991	Peromyscus_maniculatus_bairdii
ENSMEUG00000011378	VARS	100	92.484	ENSPCIG00000018553	VARS	100	92.484	Phascolarctos_cinereus
ENSMEUG00000011378	VARS	100	64.174	ENSPFOG00000015690	vars	94	72.946	Poecilia_formosa
ENSMEUG00000011378	VARS	100	64.567	ENSPLAG00000009590	vars	94	73.046	Poecilia_latipinna
ENSMEUG00000011378	VARS	100	64.174	ENSPMEG00000004708	vars	94	72.946	Poecilia_mexicana
ENSMEUG00000011378	VARS	94	73.211	ENSPREG00000013264	vars	97	73.211	Poecilia_reticulata
ENSMEUG00000011378	VARS	100	81.408	ENSPPYG00000016460	VARS	100	81.408	Pongo_abelii
ENSMEUG00000011378	VARS	85	83.813	ENSPCAG00000013565	VARS	85	83.813	Procavia_capensis
ENSMEUG00000011378	VARS	100	83.794	ENSPCOG00000010942	VARS	100	83.557	Propithecus_coquereli
ENSMEUG00000011378	VARS	100	79.984	ENSPVAG00000012403	VARS	100	79.984	Pteropus_vampyrus
ENSMEUG00000011378	VARS	100	63.219	ENSPNYG00000022511	vars	94	71.944	Pundamilia_nyererei
ENSMEUG00000011378	VARS	96	73.038	ENSPNAG00000020962	vars	97	72.811	Pygocentrus_nattereri
ENSMEUG00000011378	VARS	100	83.228	ENSRNOG00000000867	Vars	100	83.228	Rattus_norvegicus
ENSMEUG00000011378	VARS	100	83.149	ENSRBIG00000041669	VARS	100	83.149	Rhinopithecus_bieti
ENSMEUG00000011378	VARS	100	83.149	ENSRROG00000045490	VARS	100	83.149	Rhinopithecus_roxellana
ENSMEUG00000011378	VARS	100	82.991	ENSSBOG00000035402	VARS	100	82.991	Saimiri_boliviensis_boliviensis
ENSMEUG00000011378	VARS	100	86.881	ENSSHAG00000006937	VARS	100	86.960	Sarcophilus_harrisii
ENSMEUG00000011378	VARS	95	71.928	ENSSFOG00015014272	vars	97	71.704	Scleropages_formosus
ENSMEUG00000011378	VARS	95	71.457	ENSSMAG00000009596	vars	99	62.267	Scophthalmus_maximus
ENSMEUG00000011378	VARS	100	63.121	ENSSDUG00000014177	vars	94	72.445	Seriola_dumerili
ENSMEUG00000011378	VARS	100	62.966	ENSSLDG00000025316	vars	94	72.144	Seriola_lalandi_dorsalis
ENSMEUG00000011378	VARS	95	72.261	ENSSPAG00000017068	vars	95	72.336	Stegastes_partitus
ENSMEUG00000011378	VARS	100	82.846	ENSSSCG00000038950	VARS	100	82.846	Sus_scrofa
ENSMEUG00000011378	VARS	82	62.536	ENSTRUG00000012307	vars	98	62.201	Takifugu_rubripes
ENSMEUG00000011378	VARS	95	71.558	ENSTNIG00000008011	vars	100	63.129	Tetraodon_nigroviridis
ENSMEUG00000011378	VARS	50	89.888	ENSTBEG00000004728	-	56	89.888	Tupaia_belangeri
ENSMEUG00000011378	VARS	94	82.192	ENSTTRG00000014128	VARS	94	82.192	Tursiops_truncatus
ENSMEUG00000011378	VARS	95	84.689	ENSUAMG00000010424	VARS	95	84.689	Ursus_americanus
ENSMEUG00000011378	VARS	88	88.611	ENSUMAG00000013486	VARS	93	89.076	Ursus_maritimus
ENSMEUG00000011378	VARS	100	82.292	ENSVVUG00000021323	VARS	100	82.292	Vulpes_vulpes
ENSMEUG00000011378	VARS	91	67.600	ENSXETG00000024076	vars	98	60.694	Xenopus_tropicalis
ENSMEUG00000011378	VARS	100	64.252	ENSXCOG00000019172	vars	100	64.173	Xiphophorus_couchianus
ENSMEUG00000011378	VARS	100	64.097	ENSXMAG00000010927	vars	100	64.019	Xiphophorus_maculatus